| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-25 | 63.64 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
PLSTLSVLRDNDAVVEIELP+P+TLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDVCWLHAIFRAK AGGPGGG+T
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 9.8e-26 | 62.75 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVP+TLPTSAESS ++SSTW+ELY ESVH+ ++++F+V G + DDVCWLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT
+T
Subjt: LT
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| TYK01618.1 uncharacterized protein E5676_scaffold451G002250 [Cucumis melo var. makuwa] | 3.1e-24 | 61.9 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIEL VPNTLPTSAESS ++SSTW+ELY ESVH+ ++++F V G + DVCWLHA+F+AK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT-WV
+T WV
Subjt: LT-WV
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-25 | 63.64 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
PLSTLSVLRDNDAVVEIELP+P+TLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDVCWLHAIFRAK AGGPGGG+T
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 9.8e-26 | 62.75 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVP+TLPTSAESS ++SSTW+ELY ESVH+ ++++F+V G + DDVCWLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT
+T
Subjt: LT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 1.4e-25 | 63.64 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
PLSTLSVLRDNDAVVEIELP+P+TLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDVCWLHAIFRAK AGGPGGG+T
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
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| A0A5A7V9N3 Reverse transcriptase | 4.7e-26 | 62.75 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVP+TLPTSAESS ++SSTW+ELY ESVH+ ++++F+V G + DDVCWLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT
+T
Subjt: LT
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| A0A5D3BRI2 Uncharacterized protein | 1.5e-24 | 61.9 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIEL VPNTLPTSAESS ++SSTW+ELY ESVH+ ++++F V G + DVCWLHA+F+AK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT-WV
+T WV
Subjt: LT-WV
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| A0A5D3DR18 Gag/pol protein | 1.4e-25 | 63.64 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
PLSTLSVLRDNDAVVEIELP+P+TLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDVCWLHAIFRAK AGGPGGG+T
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVS----------LEEDDVCWLHAIFRAKLAGGPGGGLT
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| A0A5D3DSY7 Putative Retrotransposon protein | 4.7e-26 | 62.75 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVP+TLPTSAESS ++SSTW+ELY ESVH+ ++++F+V G + DDVCWLHA+FRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPNTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFNVQEGQRVSLEEDDVCWLHAIFRAKLAGGPGGG
Query: LT
+T
Subjt: LT
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