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Spg003881 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003881
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold8:22899570..22903097
RNA-Seq ExpressionSpg003881
SyntenySpg003881
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]7.3e-1348.24Show/hide
Query:  VKTLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        V T + S L P   I  HFLK+RL+PTTH   +  ERV+LLYS++ G  IN+G +I  EI AC  +K+G LFF SLI ++C+  +
Subjt:  VKTLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.3e-1350.65Show/hide
Query:  LKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        L P   +  HFLK+RL+PTTH  T+  +R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  +
Subjt:  LKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]5.6e-1351.9Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLC
        T + S L P   +  HFLK+RL+PTTH  T+  ERV+LLYS++ G  IN+G II  EI A   +K+G LFF SLIT++C
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLC

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.3e-1348.19Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        T + S L P   +  HFLK+RL+PTTH  T+  E V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLIT +C+  +
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.3e-1339.81Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIIPGKDEVLSKAGENST
        T + S L P   +  HFLK+RL+PTTH   +  +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+    +  ++++      ++T
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIIPGKDEVLSKAGENST

Query:  GEV
        GE+
Subjt:  GEV

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)3.6e-1348.24Show/hide
Query:  VKTLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        V T + S L P   I  HFLK+RL+PTTH   +  ERV+LLYS++ G  IN+G +I  EI AC  +K+G LFF SLI ++C+  +
Subjt:  VKTLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

A0A2P5CEY2 Uncharacterized protein1.6e-1350.65Show/hide
Query:  LKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        L P   +  HFLK+RL+PTTH  T+  +R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  +
Subjt:  LKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

A0A2P5CPE8 Uncharacterized protein2.7e-1351.9Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLC
        T + S L P   +  HFLK+RL+PTTH  T+  ERV+LLYS++ G  IN+G II  EI A   +K+G LFF SLIT++C
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLC

A0A2P5DAQ2 Uncharacterized protein2.1e-1348.19Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK
        T + S L P   +  HFLK+RL+PTTH  T+  E V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLIT +C+  +
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVK

A0A2P5DXM3 Uncharacterized protein3.6e-1339.81Show/hide
Query:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIIPGKDEVLSKAGENST
        T + S L P   +  HFLK+RL+PTTH   +  +R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+    +  ++++      ++T
Subjt:  TLVPSDLKPELTICLHFLKNRLMPTTHDNTIVVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIIPGKDEVLSKAGENST

Query:  GEV
        GE+
Subjt:  GEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAAGGGCAAGACCAAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGTCCATTAGGTCCCACTGAGAATTCTCCCAAAGGCTCCCATCAGTCTCCTGCCTCTAGTAGTCTCAGAGTCATACCGGTGTCCATTAGGTCCCACTGTTCCTTCA
AAACGAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGACAATTTGCCTTCACTTTCTGAAGAACAGGTTGATGCCAACAACCCATGACAACACTATTGTA
GTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAAATCAACATTGGGAGCATTATCAGGGAGGAAATCCTTGCATGTGGAAGGAAGAAAGCAGGGAAGCT
CTTCTTTGGGTCGCTCATTACCCAACTTTGTCAAAGGGTAAAGATAATTCCTGGTAAGGATGAAGTTCTGTCTAAGGCTGGAGAGAACTCTACTGGTGAAGTTCTGTCTG
GAAGGGAATGCTTGAAGGATCAAGCTCTATGGAGATATGTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAAGGGCAAGACCAAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGGTCCATTAGGTCCCACTGAGAATTCTCCCAAAGGCTCCCATCAGTCTCCTGCCTCTAGTAGTCTCAGAGTCATACCGGTGTCCATTAGGTCCCACTGTTCCTTCA
AAACGAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGACAATTTGCCTTCACTTTCTGAAGAACAGGTTGATGCCAACAACCCATGACAACACTATTGTA
GTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAAATCAACATTGGGAGCATTATCAGGGAGGAAATCCTTGCATGTGGAAGGAAGAAAGCAGGGAAGCT
CTTCTTTGGGTCGCTCATTACCCAACTTTGTCAAAGGGTAAAGATAATTCCTGGTAAGGATGAAGTTCTGTCTAAGGCTGGAGAGAACTCTACTGGTGAAGTTCTGTCTG
GAAGGGAATGCTTGAAGGATCAAGCTCTATGGAGATATGTGAAATGA
Protein sequenceShow/hide protein sequence
MGESGQFADSIILPFQGQDQMGAGNITVQDGIHSFPYWGPLGPTENSPKGSHQSPASSSLRVIPVSIRSHCSFKTKVKTLVPSDLKPELTICLHFLKNRLMPTTHDNTIV
VERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLITQLCQRVKIIPGKDEVLSKAGENSTGEVLSGRECLKDQALWRYVK