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Spg003900 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003900
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold8:22165006..22169155
RNA-Seq ExpressionSpg003900
SyntenySpg003900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.2e-1036.36Show/hide
Query:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH
        + +VPLVREFY  L +   +   VR   VS+S   IN V+ +  P+    ++ I+N + + L   L+ VA  G +W  S     T + S L     VW H
Subjt:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH

Query:  FIKNRLLPTTHDSTISVEKIV
        F+K+RLLPTTH  T+S ++++
Subjt:  FIKNRLLPTTHDSTISVEKIV

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.0e-1233.33Show/hide
Query:  EKGFSNRAGTLPDFEALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTL
        EKG S    + P       +VR+FY G    +     ++ + VSFS  DIN +YQ+K   +  GN  I +P+ +Q+++AL+++   G++W  S   V TL
Subjt:  EKGFSNRAGTLPDFEALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTL

Query:  VLSDLKQEPVVWLHFIKNRLLPTTHDSTISVEKIV
            L  E  +W++ +K RL+ TTHD T+S ++++
Subjt:  VLSDLKQEPVVWLHFIKNRLLPTTHDSTISVEKIV

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]5.0e-1129.63Show/hide
Query:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH
        + ++ +VR FY G   ++    +++   V FS  DIN +Y++K  L   GN  I +P    +++ L+++   G QW  S   +KTL  + L  E  +W++
Subjt:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH

Query:  FIKNRLLPTTHDSTISVEKIVPGKDEERHFFRPTF
         +K RL+PT+H+ T+S   ++        F  P F
Subjt:  FIKNRLLPTTHDSTISVEKIVPGKDEERHFFRPTF

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.1e-0932.23Show/hide
Query:  LVP-LVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHF
        +VP +V +FY G   E+      + + V FS  +IN +YQ++      GN  I +P+ + ++ ALK++A  G +W  S   ++TL    L  +  +W++ 
Subjt:  LVP-LVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHF

Query:  IKNRLLPTTHDSTISVEKIVP
        +K +L+PTTHD T+S ++ +P
Subjt:  IKNRLLPTTHDSTISVEKIVP

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.1e-1330.13Show/hide
Query:  DFLNEKGFSNRAGTLPDFEALV-----------------PLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEA
        D + E GF   +  LPDF ++V                  +VR FY G    +    +++  +V FS  DIN +Y++K      GN  I +P  +++++A
Subjt:  DFLNEKGFSNRAGTLPDFEALV-----------------PLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEA

Query:  LKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHFIKNRLLPTTHDSTISVEKIV
        L+ +   G QW  S   +KTL  S L  E  +W++ +K R++PT+HD T+S ++++
Subjt:  LKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHFIKNRLLPTTHDSTISVEKIV

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.9e-0935.54Show/hide
Query:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH
        + +VPLVREFY  L +   +   VR   VS+S   IN V+ +  P+    ++ I+N +   L   L+ VA  G +W  S     T + S L     VW H
Subjt:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH

Query:  FIKNRLLPTTHDSTISVEKIV
        F+K+ LLPTTH  T+S ++++
Subjt:  FIKNRLLPTTHDSTISVEKIV

A0A2P5BCG4 Uncharacterized protein (Fragment)3.5e-1036.36Show/hide
Query:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH
        + +VPLVREFY  L +   +   VR   VS+S   IN V+ +  P+    ++ I+N + + L   L+ VA  G +W  S     T + S L     VW H
Subjt:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH

Query:  FIKNRLLPTTHDSTISVEKIV
        F+K+RLLPTTH  T+S ++++
Subjt:  FIKNRLLPTTHDSTISVEKIV

A0A2P5DAQ2 Uncharacterized protein1.1e-0832.5Show/hide
Query:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH
        + +VPLVREFY  +         +R   V  S+  IN ++ +  P+    ++ +++ +  +L   L+ VA  G +W  S     T + S L     VW H
Subjt:  EALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLH

Query:  FIKNRLLPTTHDSTISVEKI
        F+K+RLLPTTH  T+S E +
Subjt:  FIKNRLLPTTHDSTISVEKI

A0A2P5DXM3 Uncharacterized protein6.6e-0926.83Show/hide
Query:  VPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHFIK
        +PLVREFY  L +   +   VR   VS+S   IN V+ +  P+    ++ I+N +  +L   L+ VA  G +W  S     T + S L     VW HF+K
Subjt:  VPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHFIK

Query:  NRLLPTTHDSTISVEK------IVPGK-----------------DEERHFFRPTFDLPPIGKLQQN-----NAQRKDKTSTSQATPPPGLNPASPPQHTP
        +RLLPTTH   +S ++      ++ GK                  +    F P+     I +L +N     N ++   T    A     +    P + T 
Subjt:  NRLLPTTHDSTISVEK------IVPGK-----------------DEERHFFRPTFDLPPIGKLQQN-----NAQRKDKTSTSQATPPPGLNPASPPQHTP

Query:  ISGPTPSSEALAFAFR-------QLDQIEDKM----------KTYWVYAKERDETIREFYLAIAPSIAPMFPDFPQLLLPQEEKESE
           P+ S  A A + R       QL  +E ++          + +W Y+KERD  +++          P FP FPQ +L   + E E
Subjt:  ISGPTPSSEALAFAFR-------QLDQIEDKM----------KTYWVYAKERDETIREFYLAIAPSIAPMFPDFPQLLLPQEEKESE

A0A5D3CW17 Uncharacterized protein9.5e-0836.67Show/hide
Query:  ALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHF
        ++V L    Y+ + E     A V+EK V F    IN +Y +K   +  G+   +NP A+ L++AL+ +   G +W    T+   L  +DL  E  VWL F
Subjt:  ALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPLHLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHF

Query:  IKNRLLPTTHDSTISVEKIV
        IK  ++PT HDSTIS+E I+
Subjt:  IKNRLLPTTHDSTISVEKIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATAATTCACACCGACGACTTTTGGACAACCACTTGGATCTTCTCTACTATCCTCAGGCCTTGGAACGGATTGTGGGATCCTCAATTGATAGGAATTGGAAAGG
AAAGCTTATAGCTAAGCTGTTGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAACAGAGCTTGGTTTTGCAGAAT
GCTCAGCTTTGAGAAAGAAAAGAAGAAGAGAACTTAGGGCAGAGAGGAGGATAAAGAATAAGAATGACCCCATATTTGCTAAGAGGCTGAGAACAAGGTCCATGGACGCC
TTTCCTGCACCTCTTTCTACCTCCACACCTGTCAAACCAAAGATCAAAATGCCTAAAGCTCCATCACCAAAGAATTCATTCCTTGGAGTCTTCAAGGATGTTAATTTCCA
AGAGAAGATGGAGATTATGAGAAAGAAAGACTTTCTAAACGAGAAAGGATTCTCAAATAGAGCGGGAACTTTGCCAGACTTCGAGGCACTGGTGCCTCTAGTTCGAGAGT
TTTATGTTGGTTTGAGGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGAGAAGATGGTCAGTTTCTCTTTGGTTGACATCAATAGGGTGTACCAGATCAAAGCTCCTTTG
CATCTGAGAGGCAATGATGCAATCAAGAACCCCTCGGCCAAACAATTAAAAGAGGCATTGAAGATGGTAGCCAACAAAGGAGTTCAGTGGAAGGAATCCCAAACAAAGGT
GAAGACCTTAGTGCTAAGTGATCTCAAACAAGAACCGGTAGTGTGGCTTCACTTCATCAAGAATAGATTGTTGCCCACAACCCACGATAGCACAATTTCAGTCGAGAAGA
TAGTTCCTGGAAAAGATGAGGAACGTCACTTCTTTAGGCCAACATTTGATTTACCTCCGATTGGGAAGCTTCAACAGAACAATGCCCAAAGAAAGGACAAAACTTCCACT
TCCCAAGCTACTCCACCTCCAGGGCTGAATCCTGCTTCACCTCCTCAACACACTCCTATTTCAGGGCCTACACCATCATCTGAGGCCCTTGCATTTGCCTTTCGACAGCT
AGACCAGATTGAAGACAAGATGAAAACTTACTGGGTCTATGCTAAGGAGAGGGATGAAACAATTAGAGAGTTTTACCTCGCTATCGCCCCCAGCATTGCCCCTATGTTCC
CTGACTTCCCTCAATTGTTGCTGCCTCAAGAAGAAAAAGAATCTGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATAATTCACACCGACGACTTTTGGACAACCACTTGGATCTTCTCTACTATCCTCAGGCCTTGGAACGGATTGTGGGATCCTCAATTGATAGGAATTGGAAAGG
AAAGCTTATAGCTAAGCTGTTGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAACAGAGCTTGGTTTTGCAGAAT
GCTCAGCTTTGAGAAAGAAAAGAAGAAGAGAACTTAGGGCAGAGAGGAGGATAAAGAATAAGAATGACCCCATATTTGCTAAGAGGCTGAGAACAAGGTCCATGGACGCC
TTTCCTGCACCTCTTTCTACCTCCACACCTGTCAAACCAAAGATCAAAATGCCTAAAGCTCCATCACCAAAGAATTCATTCCTTGGAGTCTTCAAGGATGTTAATTTCCA
AGAGAAGATGGAGATTATGAGAAAGAAAGACTTTCTAAACGAGAAAGGATTCTCAAATAGAGCGGGAACTTTGCCAGACTTCGAGGCACTGGTGCCTCTAGTTCGAGAGT
TTTATGTTGGTTTGAGGGAAGAGAGCATGAGCATGGCGGTGGTGAGAGAGAAGATGGTCAGTTTCTCTTTGGTTGACATCAATAGGGTGTACCAGATCAAAGCTCCTTTG
CATCTGAGAGGCAATGATGCAATCAAGAACCCCTCGGCCAAACAATTAAAAGAGGCATTGAAGATGGTAGCCAACAAAGGAGTTCAGTGGAAGGAATCCCAAACAAAGGT
GAAGACCTTAGTGCTAAGTGATCTCAAACAAGAACCGGTAGTGTGGCTTCACTTCATCAAGAATAGATTGTTGCCCACAACCCACGATAGCACAATTTCAGTCGAGAAGA
TAGTTCCTGGAAAAGATGAGGAACGTCACTTCTTTAGGCCAACATTTGATTTACCTCCGATTGGGAAGCTTCAACAGAACAATGCCCAAAGAAAGGACAAAACTTCCACT
TCCCAAGCTACTCCACCTCCAGGGCTGAATCCTGCTTCACCTCCTCAACACACTCCTATTTCAGGGCCTACACCATCATCTGAGGCCCTTGCATTTGCCTTTCGACAGCT
AGACCAGATTGAAGACAAGATGAAAACTTACTGGGTCTATGCTAAGGAGAGGGATGAAACAATTAGAGAGTTTTACCTCGCTATCGCCCCCAGCATTGCCCCTATGTTCC
CTGACTTCCCTCAATTGTTGCTGCCTCAAGAAGAAAAAGAATCTGAAGAATAA
Protein sequenceShow/hide protein sequence
MFYNSHRRLLDNHLDLLYYPQALERIVGSSIDRNWKGKLIAKLLQVLRIELKVVIICPCRKNYFAATELGFAECSALRKKRRRELRAERRIKNKNDPIFAKRLRTRSMDA
FPAPLSTSTPVKPKIKMPKAPSPKNSFLGVFKDVNFQEKMEIMRKKDFLNEKGFSNRAGTLPDFEALVPLVREFYVGLREESMSMAVVREKMVSFSLVDINRVYQIKAPL
HLRGNDAIKNPSAKQLKEALKMVANKGVQWKESQTKVKTLVLSDLKQEPVVWLHFIKNRLLPTTHDSTISVEKIVPGKDEERHFFRPTFDLPPIGKLQQNNAQRKDKTST
SQATPPPGLNPASPPQHTPISGPTPSSEALAFAFRQLDQIEDKMKTYWVYAKERDETIREFYLAIAPSIAPMFPDFPQLLLPQEEKESEE