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Spg003915 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003915
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionARM repeat superfamily protein isoform 2
Genome locationscaffold4:910604..921881
RNA-Seq ExpressionSpg003915
SyntenySpg003915
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0070209 - ASTRA complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012066.1 TELO2-interacting protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5582.86Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEIV  NSL+EE+  EESN+G QR+GVFA+LKP C+ELLELLQKPKKHS SIHSMLELLR+TSPTSLQPCFDYALFPLLLL DAAV DRSQQKV+S ENI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        M SV+HDL HRVSDSVAEGVL CLEELLKKCHLGSV Q+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

XP_022147854.1 uncharacterized protein LOC111016693 isoform X1 [Momordica charantia]2.6e-5786.43Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        M IV  NS SEEEKLEESN+G QRS VFAELKPYCLELLELLQKPKKH  +I SMLELLRKTSPTS+QP FDYALFPLLLL DAAVVDRSQQKVDSGENI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        + S+SHDL HRVSDSVAEGVLQCLEELLKKCHLGSVEQ+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

XP_023554114.1 uncharacterized protein LOC111811478 isoform X1 [Cucurbita pepo subsp. pepo]2.5e-5583.57Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEIV  NSL+EE+  EESN+G QR+GVFA+LKP C+ELLELLQKPKKHS SIHSMLELLRKTS TSLQPCFDYALFPLLLL DAAV DRSQQKV+S ENI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        M SV+HDL HRVSDSVAEGVLQCLEELLKKCHLGSV Q+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

XP_038887280.1 uncharacterized protein LOC120077473 isoform X1 [Benincasa hispida]5.3e-5885.71Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEI   NSLSEEEKLEESN+G QRSGVFAELKPYCLELL+LLQ+PKKHS SIHSM +LLRKT  TSLQPCFDYALFPLLLL DAAVVDRSQQKVDSG+ I
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        MMSV+H L HRVSD VAEGVLQCLEELLKKCHLGSVEQ+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

XP_038887282.1 uncharacterized protein LOC120077473 isoform X3 [Benincasa hispida]5.3e-5885.71Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEI   NSLSEEEKLEESN+G QRSGVFAELKPYCLELL+LLQ+PKKHS SIHSM +LLRKT  TSLQPCFDYALFPLLLL DAAVVDRSQQKVDSG+ I
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        MMSV+H L HRVSD VAEGVLQCLEELLKKCHLGSVEQ+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

TrEMBL top hitse value%identityAlignment
A0A0A0K906 Uncharacterized protein4.4e-5078.57Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        ME+   N LSEEEKLEE+++G QRSGVF ELK YCLELL+LLQ PK+ S SI S+ ELLRKT   SLQ CFDY LFPLLLL DAAVVDRSQQKVDSGEN 
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        MMSVSH+L HRVSDSVAEGVLQCLEELLKKC LGSVEQ+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

A0A5D3BCU4 ARM repeat superfamily protein isoform 23.7e-4981.34Show/hide
Query:  NSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENIMMSVSH
        N  SEEEKLEE+N+G  RSGVF ELK YCLELL+LLQ PKK S SIHS+ ELLRKT  TSLQ CFDY LFPLLLL DAAVVDRSQQKVDSGEN MMSVSH
Subjt:  NSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENIMMSVSH

Query:  DLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        +L HRVSD VAEGVLQCLEELLKKC LGSVEQ+V
Subjt:  DLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

A0A6J1D288 uncharacterized protein LOC111016693 isoform X11.3e-5786.43Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        M IV  NS SEEEKLEESN+G QRS VFAELKPYCLELLELLQKPKKH  +I SMLELLRKTSPTS+QP FDYALFPLLLL DAAVVDRSQQKVDSGENI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        + S+SHDL HRVSDSVAEGVLQCLEELLKKCHLGSVEQ+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

A0A6J1GKD0 uncharacterized protein LOC111455069 isoform X14.5e-5582.86Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEIV  NSL+EE+  EESN+G QR+GVFA LKP C+ELLELLQKPKKHS SIHSMLELLRKTSPTSLQPCFDYALFPLLLL DAAV DRSQQKV+S +NI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        M SV+HDL +RVSDSVAEGVLQCLEELLKKCHLGSV Q+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

A0A6J1HXP8 uncharacterized protein LOC111468424 isoform X15.9e-5582.86Show/hide
Query:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI
        MEIV  NSL+EEE  EESNDG QR+ VFA+LKP C+ELLELLQKPKKHS SIHSML+LLRKTSPTSLQPCFDYALFPLLLL DAAV DRSQQKV+  ENI
Subjt:  MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENI

Query:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV
        M SV+H+L HRVSDSVAEGVLQCLEELLKKCHLGSV Q+V
Subjt:  MMSVSHDLLHRVSDSVAEGVLQCLEELLKKCHLGSVEQVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79190.1 ARM repeat superfamily protein2.6e-2655.93Show/hide
Query:  QRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENIMMSVSHDLLHRVSDSVAEGVLQ
        +R  VFA+LK  CLELL L Q P+K   +I ++L LLR+T P+SLQ  F Y LFPLLLL DAAV  RSQ     G+N          +RVSD VAEGV+ 
Subjt:  QRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENIMMSVSHDLLHRVSDSVAEGVLQ

Query:  CLEELLKKCHLGSVEQVV
        CLEELLKKCH+GS++Q+V
Subjt:  CLEELLKKCHLGSVEQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGTTGTTGCAAATTCCCTAAGCGAGGAAGAAAAACTGGAAGAATCAAATGATGGAGCTCAAAGAAGTGGAGTGTTCGCAGAGCTGAAACCTTATTGCCTGGA
GCTGCTAGAGCTTCTCCAAAAGCCCAAGAAGCATTCCCCCTCAATTCATTCAATGCTCGAGCTGCTTCGAAAAACTTCCCCAACTTCTCTGCAACCTTGCTTTGATTATG
CGCTGTTCCCGCTACTGCTGCTATTCGATGCAGCTGTTGTAGATAGATCTCAGCAGAAGGTTGATTCCGGAGAAAACATTATGATGTCTGTCAGTCATGATCTTCTTCAC
AGAGTGAGTGACAGTGTGGCAGAAGGTGTGCTTCAGTGTCTTGAAGAACTGCTGAAGAAGTGTCATTTAGGATCTGTGGAACAGGTGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAGTTGTTGCAAATTCCCTAAGCGAGGAAGAAAAACTGGAAGAATCAAATGATGGAGCTCAAAGAAGTGGAGTGTTCGCAGAGCTGAAACCTTATTGCCTGGA
GCTGCTAGAGCTTCTCCAAAAGCCCAAGAAGCATTCCCCCTCAATTCATTCAATGCTCGAGCTGCTTCGAAAAACTTCCCCAACTTCTCTGCAACCTTGCTTTGATTATG
CGCTGTTCCCGCTACTGCTGCTATTCGATGCAGCTGTTGTAGATAGATCTCAGCAGAAGGTTGATTCCGGAGAAAACATTATGATGTCTGTCAGTCATGATCTTCTTCAC
AGAGTGAGTGACAGTGTGGCAGAAGGTGTGCTTCAGTGTCTTGAAGAACTGCTGAAGAAGTGTCATTTAGGATCTGTGGAACAGGTGGTCTAA
Protein sequenceShow/hide protein sequence
MEIVVANSLSEEEKLEESNDGAQRSGVFAELKPYCLELLELLQKPKKHSPSIHSMLELLRKTSPTSLQPCFDYALFPLLLLFDAAVVDRSQQKVDSGENIMMSVSHDLLH
RVSDSVAEGVLQCLEELLKKCHLGSVEQVV