; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003926 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003926
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA pseudouridine synthase 4
Genome locationscaffold4:2634945..2639600
RNA-Seq ExpressionSpg003926
SyntenySpg003926
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011636.1 RNA pseudouridine synthase 4, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-11981.36Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M   A+LRRSVI R+FPSSAA GGE L+FSIF E KSTFAL++   TVSEQKNE K SNRWFTLPP+TAT +GS LGNR++N GA+AEAETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV RCCPELPRSLVQKLFRLRKVRRGSSMIE+SECNLEA++QLKRVAA DILN GD++ LP+SVQ+FP ERA D CNKEE+KFI SLVLYKDPAIL INK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLD+LAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTSVLHSIFREKT GASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

XP_022148845.1 RNA pseudouridine synthase 4, mitochondrial [Momordica charantia]1.1e-12781.51Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L ALLRRS+IL   PSS ARGG  L+FS+FHE+KSTFAL+NT  T+SE+KNEKK  NRWFTLPPYTATV GSVLGNR++NQG++AE ETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WVLRCCPELPRSLVQKLFRLRK+RRGSSMIESSECNLEAQ QLKRVAAKDILN GDQIFLP+SVQ+FP+ERARDYCNKEEEKF+ SLVLYKDPAI+VINK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHY
        PPGLPVQGGIG+ RSLDELAASCLSYDYSEPPRL       VHRLDRDSSGIL+MGRTSTSTSVLHSIFREKTFGASKH   S   +  K Y
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHY

XP_022972379.1 RNA pseudouridine synthase 4, mitochondrial [Cucurbita maxima]1.3e-12082.8Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L ALLRRSVI R+FPSSAA GGE L+FSIF E KSTFAL+N   TVSEQKNE K SNRWFTLPP+TATV+GS LGNR++N GA++EAETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV RCCPELPRSLVQKLFRLRKVRRGSSMIE+SECNLEA++QLKRVAA DILN GD++ LP+SVQ+FP ERA D CNKEE+KFI SLVLYKDPAIL INK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTSVLHSIFREKT GASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

XP_023553811.1 RNA pseudouridine synthase 4, mitochondrial [Cucurbita pepo subsp. pepo]1.3e-12082.8Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L A+LRRSVI R+FPSSAA GGE L+FSIF E KSTFAL+N   TVSEQKNE K SNRWFTLPP+TATV+GS LGNR++N GA+AEAETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV RCCPELPRSLVQKLFRLRKVRRGSSMIE+SECNLEA++QLKRVAA DILN GD++ LP+SVQ+FP ERA D CNKEE+KFI SLVLYKDPAIL INK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTSVLHSIFREKT GASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

XP_038888757.1 RNA pseudouridine synthase 4, mitochondrial [Benincasa hispida]1.8e-11981.72Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L AL+RRSVILR   SSAA  GE  +FSIFHE+KST AL+NT  TVS +KNE K SNRWFTLPPYTATV+GS+LGNR++ +G +AEAE ST AITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV+RCCPELPRSLVQKLFRLRKVRRGSSMI +SECNLEA++QLKRVAAKDILN GDQIFLP+SVQ+FP E+ARDYCNKEEEKFI SLVLYKDPAILVINK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTS+LHS+FREKTF ASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

TrEMBL top hitse value%identityAlignment
A0A1S3BZE7 RNA pseudouridine synthase 4, mitochondrial7.3e-11477.78Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L  L R SVILRT PS      E LYFSIFH +KST AL+N    VS+QKNE K SNRWFTLPPYTATV+ S+LGNR++N+GA+AE ETST AITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV+ CCPELPRSLVQKLFRLRKVRRGSSMIE+SE NLEA++QLKRVAAKDILN GDQIFLP+S Q+F  E+ RDYCNK+EE F+ SLVLYKDPAILVINK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSY YSEPPRL       VHRLDRDSSGILIMGRTSTSTS+LHS+FREKTF ASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

A0A5D3C4F5 RNA pseudouridine synthase 47.3e-11477.78Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L  L R SVILRT PS      E LYFSIFH +KST AL+N    VS+QKNE K SNRWFTLPPYTATV+ S+LGNR++N+GA+AE ETST AITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV+ CCPELPRSLVQKLFRLRKVRRGSSMIE+SE NLEA++QLKRVAAKDILN GDQIFLP+S Q+F  E+ RDYCNK+EE F+ SLVLYKDPAILVINK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSY YSEPPRL       VHRLDRDSSGILIMGRTSTSTS+LHS+FREKTF ASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

A0A6J1D432 RNA pseudouridine synthase 4, mitochondrial5.2e-12881.51Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L ALLRRS+IL   PSS ARGG  L+FS+FHE+KSTFAL+NT  T+SE+KNEKK  NRWFTLPPYTATV GSVLGNR++NQG++AE ETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WVLRCCPELPRSLVQKLFRLRK+RRGSSMIESSECNLEAQ QLKRVAAKDILN GDQIFLP+SVQ+FP+ERARDYCNKEEEKF+ SLVLYKDPAI+VINK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHY
        PPGLPVQGGIG+ RSLDELAASCLSYDYSEPPRL       VHRLDRDSSGIL+MGRTSTSTSVLHSIFREKTFGASKH   S   +  K Y
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHY

A0A6J1GMP9 RNA pseudouridine synthase 4, mitochondrial9.8e-11981.36Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L A+LRRSVI R+FPSSAA GGE L+FSIF E KST+AL+    TVSEQKNE K SNRWFTLPP+TAT +GS LGNR++N GA+AEAETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV RCCPELPRSLVQKLFRLRKVRRGSSMIE+SECNLEA++QLKRVAA DILN GD++ LP+SVQ+FP ERA D CNKEE+KFI SLVLYKDPAIL INK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLD+LAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTSVLHSIFREKT GASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

A0A6J1IBC5 RNA pseudouridine synthase 4, mitochondrial6.2e-12182.8Show/hide
Query:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK
        M L ALLRRSVI R+FPSSAA GGE L+FSIF E KSTFAL+N   TVSEQKNE K SNRWFTLPP+TATV+GS LGNR++N GA++EAETSTTAITALK
Subjt:  MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALK

Query:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK
        WV RCCPELPRSLVQKLFRLRKVRRGSSMIE+SECNLEA++QLKRVAA DILN GD++ LP+SVQ+FP ERA D CNKEE+KFI SLVLYKDPAIL INK
Subjt:  WVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINK

Query:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH
        PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRL       VHRLDRDSSGILIMGRTSTSTSVLHSIFREKT GASKH
Subjt:  PPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKH

SwissProt top hitse value%identityAlignment
P57430 Ribosomal large subunit pseudouridine synthase C8.6e-1130.21Show/hide
Query:  LPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAK---DILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLP
        +P+S++ ++ R  K+R     I+     L+  + LK    K   DI NT            FP   + +  N+         +LY+D  +L+INKP G+ 
Subjt:  LPRSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAK---DILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLP

Query:  VQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHYKSVME
        V GG G+   + E         Y    R + + L  VHR+DRD+SG+LI+ +  TS   LH   REK     K     VH L+  H K + E
Subjt:  VQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHYKSVME

Q0J4D4 RNA pseudouridine synthase 3, mitochondrial4.2e-2636.87Show/hide
Query:  TLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQE-QLKRVAAKDILNTGDQIFLP
        +LPP+     G  L  R      R         +TA+ WV     ++P+ +VQ  F  R V    S  E S   +++Q+  LK++   D++  G +I LP
Subjt:  TLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEAQE-QLKRVAAKDILNTGDQIFLP

Query:  VSV---------QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGI
        VSV         +  P   A  + NK+E +++R LV++KD AILV+NKPP +P++G + V  S+D LAA+ LSY   E P+L       VHRLDR+SSG+
Subjt:  VSV---------QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGI

Query:  LIMGRTSTSTSVLHSIF
        L+ GRT  S + LH +F
Subjt:  LIMGRTSTSTSVLHSIF

Q5XET6 RNA pseudouridine synthase 3, mitochondrial1.8e-2431.87Show/hide
Query:  STFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPEL---------PRSLVQKLFRLRKVRRGS
        S   +TN +  +   K +     +  +LPP+     G  L  +  N GA  +   S   +TA+ WV     E+          + LVQ  FR R+     
Subjt:  STFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPEL---------PRSLVQKLFRLRKVRRGS

Query:  SMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARD-------YCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELA
           ++S    +    ++++   +++  GD+I+LPVS+      +  D       Y N +E  +++ LV +KD AI+V+NKPP LPV+G + +  S+D LA
Subjt:  SMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARD-------YCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELA

Query:  ASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFRE
        A+ LS+   E PRL       VHRLDR++SG+L+MGRT  S   LHS+F +
Subjt:  ASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFRE

Q69K07 RNA pseudouridine synthase 4, mitochondrial4.3e-4744.31Show/hide
Query:  WFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEA-QEQLKRVAAKDILNTGDQIF
        W  LPP+    + +    R +++G   E        TA+KWV RCCP+LP SLVQKLFRLRKV++     E S  +  A Q +L+RV+AKD L  GD +F
Subjt:  WFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSMIESSECNLEA-QEQLKRVAAKDILNTGDQIF

Query:  LPVSV-QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRT
        LPV++ +    E+ + + N+ E  F+R L +YKD AI+V+NKPPG+PVQGG+G+K S+D L AS    + SE PRL       VHRLDRD SGIL++GR 
Subjt:  LPVSV-QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRT

Query:  STSTSVLHSIFREKTFGA----SKHVFFSVHLLFL----KHYKSVMETNEIKVLL
          STS+LH+IFREKT  A    ++HV    ++  +    +H K ++     K+LL
Subjt:  STSTSVLHSIFREKTFGA----SKHVFFSVHLLFL----KHYKSVMETNEIKVLL

Q9LT72 RNA pseudouridine synthase 4, mitochondrial1.4e-6154.42Show/hide
Query:  RWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSM-IESSECNLEAQEQLKRVAAKDILNTGDQI
        +W TLPP++ T+ G+ +G  +++ G   ++ T  +  TAL+W+LRC P+LPR+LVQKLFRLR+VRR  SM ++  E     + QLKRVAAK+ LN GD+I
Subjt:  RWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSM-IESSECNLEAQEQLKRVAAKDILNTGDQI

Query:  FLPVSV-----QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGIL
        +LP+SV     Q  P ++    C+ EE KF+ SLVLYKDPAI+V+NKP GL VQGG G+K S+DELAASCL +D SE PRL       VHRLDRD SG+L
Subjt:  FLPVSV-----QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGIL

Query:  IMGRTSTSTSVLHSIFREKTFGASKH
        ++ RT T+ +VLHSIFREKT GAS +
Subjt:  IMGRTSTSTSVLHSIFREKTFGASKH

Arabidopsis top hitse value%identityAlignment
AT1G78910.1 Pseudouridine synthase family protein1.3e-2531.87Show/hide
Query:  STFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPEL---------PRSLVQKLFRLRKVRRGS
        S   +TN +  +   K +     +  +LPP+     G  L  +  N GA  +   S   +TA+ WV     E+          + LVQ  FR R+     
Subjt:  STFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPEL---------PRSLVQKLFRLRKVRRGS

Query:  SMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARD-------YCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELA
           ++S    +    ++++   +++  GD+I+LPVS+      +  D       Y N +E  +++ LV +KD AI+V+NKPP LPV+G + +  S+D LA
Subjt:  SMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARD-------YCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELA

Query:  ASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFRE
        A+ LS+   E PRL       VHRLDR++SG+L+MGRT  S   LHS+F +
Subjt:  ASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFRE

AT3G19440.1 Pseudouridine synthase family protein9.9e-6354.42Show/hide
Query:  RWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSM-IESSECNLEAQEQLKRVAAKDILNTGDQI
        +W TLPP++ T+ G+ +G  +++ G   ++ T  +  TAL+W+LRC P+LPR+LVQKLFRLR+VRR  SM ++  E     + QLKRVAAK+ LN GD+I
Subjt:  RWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELPRSLVQKLFRLRKVRRGSSM-IESSECNLEAQEQLKRVAAKDILNTGDQI

Query:  FLPVSV-----QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGIL
        +LP+SV     Q  P ++    C+ EE KF+ SLVLYKDPAI+V+NKP GL VQGG G+K S+DELAASCL +D SE PRL       VHRLDRD SG+L
Subjt:  FLPVSV-----QLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELAASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGIL

Query:  IMGRTSTSTSVLHSIFREKTFGASKH
        ++ RT T+ +VLHSIFREKT GAS +
Subjt:  IMGRTSTSTSVLHSIFREKTFGASKH

AT3G52260.1 Pseudouridine synthase family protein2.7e-0434.78Show/hide
Query:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT
        VLY+D  ++ +NKP GL V  GG+  +R++      C   + S     E P  V      VHRL R +SGIL+  +T  + + L + F E T
Subjt:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT

AT3G52260.2 Pseudouridine synthase family protein2.7e-0434.78Show/hide
Query:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT
        VLY+D  ++ +NKP GL V  GG+  +R++      C   + S     E P  V      VHRL R +SGIL+  +T  + + L + F E T
Subjt:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT

AT3G52260.3 Pseudouridine synthase family protein2.7e-0434.78Show/hide
Query:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT
        VLY+D  ++ +NKP GL V  GG+  +R++      C   + S     E P  V      VHRL R +SGIL+  +T  + + L + F E T
Subjt:  VLYKDPAILVINKPPGLPV-QGGIGVKRSLDELAASCLSYDYS-----EPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGCGGCACTCCTCCGTCGTTCTGTCATCCTCCGGACTTTCCCGTCTTCCGCCGCTCGCGGCGGCGAATGCCTCTATTTCTCAATCTTTCATGAGATGAAGTC
CACCTTCGCCTTGACTAACACCATCGGAACTGTTTCCGAACAGAAAAATGAGAAGAAAGAAAGCAACAGATGGTTCACCTTGCCTCCATACACTGCGACTGTAAGCGGCT
CGGTTTTAGGTAATCGCATGGTGAACCAAGGAGCTCGAGCCGAAGCAGAAACTTCCACCACTGCAATCACCGCTCTGAAATGGGTGCTTCGCTGCTGCCCGGAGCTGCCG
AGGAGCCTCGTGCAGAAGCTGTTTCGATTGAGAAAGGTTCGAAGAGGTTCTTCTATGATTGAAAGTTCTGAATGTAATTTGGAAGCTCAAGAACAACTTAAAAGAGTGGC
AGCCAAGGACATTCTGAACACAGGTGATCAAATTTTTCTCCCTGTCTCAGTTCAACTATTTCCCAAAGAGAGAGCTCGGGATTATTGCAATAAAGAAGAAGAGAAATTCA
TACGTAGTTTAGTATTATATAAGGATCCAGCAATACTTGTTATCAATAAACCTCCTGGCTTGCCTGTACAGGGTGGTATTGGCGTCAAAAGAAGTTTAGATGAATTGGCT
GCAAGTTGTTTAAGTTATGACTACTCGGAACCACCTCGGCTTGTAATTAGAACATTGAACTCTGTACATAGGCTTGACAGGGACAGCAGTGGCATCTTGATAATGGGAAG
GACTTCCACAAGTACTTCAGTTCTCCATTCTATCTTCCGTGAGAAAACTTTTGGGGCATCAAAACATGTATTTTTCTCTGTACACCTGTTGTTTCTTAAACATTATAAAA
GTGTGATGGAAACAAACGAAATTAAAGTACTGCTATCATGCAAACTGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTGCGGCACTCCTCCGTCGTTCTGTCATCCTCCGGACTTTCCCGTCTTCCGCCGCTCGCGGCGGCGAATGCCTCTATTTCTCAATCTTTCATGAGATGAAGTC
CACCTTCGCCTTGACTAACACCATCGGAACTGTTTCCGAACAGAAAAATGAGAAGAAAGAAAGCAACAGATGGTTCACCTTGCCTCCATACACTGCGACTGTAAGCGGCT
CGGTTTTAGGTAATCGCATGGTGAACCAAGGAGCTCGAGCCGAAGCAGAAACTTCCACCACTGCAATCACCGCTCTGAAATGGGTGCTTCGCTGCTGCCCGGAGCTGCCG
AGGAGCCTCGTGCAGAAGCTGTTTCGATTGAGAAAGGTTCGAAGAGGTTCTTCTATGATTGAAAGTTCTGAATGTAATTTGGAAGCTCAAGAACAACTTAAAAGAGTGGC
AGCCAAGGACATTCTGAACACAGGTGATCAAATTTTTCTCCCTGTCTCAGTTCAACTATTTCCCAAAGAGAGAGCTCGGGATTATTGCAATAAAGAAGAAGAGAAATTCA
TACGTAGTTTAGTATTATATAAGGATCCAGCAATACTTGTTATCAATAAACCTCCTGGCTTGCCTGTACAGGGTGGTATTGGCGTCAAAAGAAGTTTAGATGAATTGGCT
GCAAGTTGTTTAAGTTATGACTACTCGGAACCACCTCGGCTTGTAATTAGAACATTGAACTCTGTACATAGGCTTGACAGGGACAGCAGTGGCATCTTGATAATGGGAAG
GACTTCCACAAGTACTTCAGTTCTCCATTCTATCTTCCGTGAGAAAACTTTTGGGGCATCAAAACATGTATTTTTCTCTGTACACCTGTTGTTTCTTAAACATTATAAAA
GTGTGATGGAAACAAACGAAATTAAAGTACTGCTATCATGCAAACTGACATGA
Protein sequenceShow/hide protein sequence
MALAALLRRSVILRTFPSSAARGGECLYFSIFHEMKSTFALTNTIGTVSEQKNEKKESNRWFTLPPYTATVSGSVLGNRMVNQGARAEAETSTTAITALKWVLRCCPELP
RSLVQKLFRLRKVRRGSSMIESSECNLEAQEQLKRVAAKDILNTGDQIFLPVSVQLFPKERARDYCNKEEEKFIRSLVLYKDPAILVINKPPGLPVQGGIGVKRSLDELA
ASCLSYDYSEPPRLVIRTLNSVHRLDRDSSGILIMGRTSTSTSVLHSIFREKTFGASKHVFFSVHLLFLKHYKSVMETNEIKVLLSCKLT