; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003934 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003934
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold4:2537334..2540781
RNA-Seq ExpressionSpg003934
SyntenySpg003934
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]1.7e-1744.44Show/hide
Query:  ESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE
        +S+ KRP  SD  S +D+K+     GR   D    L+ F  YTP ++  EQIL EIRN   L  P++++S+P  RD+++YC FHRDHGH T  C QLKDE
Subjt:  ESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE

Query:  IEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDK
        IE LI+ GYL  F  + E   R    T + P K++
Subjt:  IEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDK

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.2e-1743.97Show/hide
Query:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        L   Q Y+ +A E   SK+ ES  KR +   R+   DK Q      R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +Y
Subjt:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        CLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.6e-2045.58Show/hide
Query:  NTLKE-LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDN
        NT  E L   Q Y+ +A E   SK+ E + KR +   R+   DK Q      R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   
Subjt:  NTLKE-LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDN

Query:  RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.0e-1935.8Show/hide
Query:  KDNPPWKTELLNTLKELGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNA
        K  P    E L+  ++  + + +    +E L+ K+ + + +R       S+ +K+ R+         Q D  +KFE+YTPT++P EQ+LMEI++  LL  
Subjt:  KDNPPWKTELLNTLKELGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNA

Query:  PRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDKAFQLR
        P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+      D     P R++  K    ++R
Subjt:  PRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDKAFQLR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.8e-1743.26Show/hide
Query:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        L   Q Y+ +A E   SK+ E + KR +   R+   DK Q      R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +Y
Subjt:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        CLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.0e-1743.97Show/hide
Query:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        L   Q Y+ +A E   SK+ ES  KR +   R+   DK Q      R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +Y
Subjt:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        CLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

A0A6J1DDR5 uncharacterized protein LOC1110201152.6e-1639.44Show/hide
Query:  GNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNT---NLLNAPRKLKSNPDNRDKS
        G P+  +         +K +S+ K    S   SR D ++    H R RP        +ERYTPT+IP  +IL  I  +    LL  P KL+ +P+ R+K 
Subjt:  GNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNT---NLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEAD
        +YCLFHRDHGHST NC +LK +IE LI++ Y K+F  K  ++
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEAD

A0A6J1DWY0 uncharacterized protein LOC1110252931.7e-2045.58Show/hide
Query:  NTLKE-LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDN
        NT  E L   Q Y+ +A E   SK+ E + KR +   R+   DK Q      R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   
Subjt:  NTLKE-LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDN

Query:  RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-1743.26Show/hide
Query:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY
        L   Q Y+ +A E   SK+ E + KR +   R+   DK Q      R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +Y
Subjt:  LGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQY

Query:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ
        CLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q
Subjt:  CLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256125.0e-2035.8Show/hide
Query:  KDNPPWKTELLNTLKELGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNA
        K  P    E L+  ++  + + +    +E L+ K+ + + +R       S+ +K+ R+         Q D  +KFE+YTPT++P EQ+LMEI++  LL  
Subjt:  KDNPPWKTELLNTLKELGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNA

Query:  PRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDKAFQLR
        P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+      D     P R++  K    ++R
Subjt:  PRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDKAFQLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCACCGGTGCTTCCAGCCGCCCCGGTTACGCCTGGTTTGACCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGATCCCGATCAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACC
GCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCTTCATCCCGAGAGAAGCAAGCTGATCTCAAATTT
GCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAG
GGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACGAGGTTGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTA
CTGATCGTACGATTTTGAGGAGCCTAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTTATACTAAGACAGACCTGAGGAATCTGATC
GAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTAAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCCAAGAA
GGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAACGCAGAGGAGTTGCTCAAGTCAAAGAAGTTAGAAA
GTGAACACAAGAGGCCTTCTTCATCCGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGATCGACGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAG
TTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCCTGATGGAGATAAGGAATACAAATCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAG
AGATAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGG
AGTTCACCATTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAAGCTTTTCAGCTTAGAGCCCACGCCACTGCTCACGAGCCT
GGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGCTCAAGCACTTCATATAAGTCAAGCTCACCTGGCGGAGGCCGAGACCGAGCACCTCTTGCCAAAATCGAG
CACCTCTTGCCGAGGCCGAGCACAAACTTTAAAGGGAGCTAAGTTTCAGGCTAACAGGGGCATGAGGCCGATGCCGAAGCCTAGCCTCTTCCCTCATTCTTCTTTTGCAG
AAATTAACTTTTTGATGCAGGATCATGAGATCTTCCATTTTTCCTACATTCTACTTGTGGATAAGCCCTGGATCCGGGATGATGCACTCCGAATACCCCTAAGCAAAATT
AGAAGAAATGCTCGGCCTCTTCCCGAGGCCGAGGCCGAGCAGGCACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCACCGGTGCTTCCAGCCGCCCCGGTTACGCCTGGTTTGACCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGATCCCGATCAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACC
GCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCTTCATCCCGAGAGAAGCAAGCTGATCTCAAATTT
GCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAG
GGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACGAGGTTGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTA
CTGATCGTACGATTTTGAGGAGCCTAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTTATACTAAGACAGACCTGAGGAATCTGATC
GAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTAAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCCAAGAA
GGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAACGCAGAGGAGTTGCTCAAGTCAAAGAAGTTAGAAA
GTGAACACAAGAGGCCTTCTTCATCCGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGATCGACGACCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAG
TTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCCTGATGGAGATAAGGAATACAAATCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAG
AGATAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGG
AGTTCACCATTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAAGCTTTTCAGCTTAGAGCCCACGCCACTGCTCACGAGCCT
GGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGCTCAAGCACTTCATATAAGTCAAGCTCACCTGGCGGAGGCCGAGACCGAGCACCTCTTGCCAAAATCGAG
CACCTCTTGCCGAGGCCGAGCACAAACTTTAAAGGGAGCTAAGTTTCAGGCTAACAGGGGCATGAGGCCGATGCCGAAGCCTAGCCTCTTCCCTCATTCTTCTTTTGCAG
AAATTAACTTTTTGATGCAGGATCATGAGATCTTCCATTTTTCCTACATTCTACTTGTGGATAAGCCCTGGATCCGGGATGATGCACTCCGAATACCCCTAAGCAAAATT
AGAAGAAATGCTCGGCCTCTTCCCGAGGCCGAGGCCGAGCAGGCACACTAA
Protein sequenceShow/hide protein sequence
MVGPLARAELGHLLSVTGASSRPGYAWFDPKRLRIPKNPRIPISLPNLHIGHSMSKGMEKRIQDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKF
AALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRLKGKKTSSMTSKVRGLKPTDRTILRSLESSTLKGHDYTVSTPSYGYTKTDLRNLI
EEKRRSAKTAESKARAAEAEARAAEAEARAAEAEAKKDNPPWKTELLNTLKELGNPQGYLQNAEELLKSKKLESEHKRPSSSDRDSRKDKKQRIDDHGRGRPDQGDYLKK
FERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTIKAEADQRWPRPTRDDPGKDKAFQLRAHATAHEP
GLPSLPHLRAQTLAQALHISQAHLAEAETEHLLPKSSTSCRGRAQTLKGAKFQANRGMRPMPKPSLFPHSSFAEINFLMQDHEIFHFSYILLVDKPWIRDDALRIPLSKI
RRNARPLPEAEAEQAH