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Spg003938 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003938
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVacuolar sorting receptor protein
Genome locationscaffold4:2228244..2229807
RNA-Seq ExpressionSpg003938
SyntenySpg003938
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0006623 - protein targeting to vacuole (biological process)
GO:0006896 - Golgi to vacuole transport (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005768 - endosome (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001881 - EGF-like calcium-binding domain
IPR018097 - EGF-like calcium-binding, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571923.1 Vacuolar-sorting receptor 3, partial [Cucurbita argyrosperma subsp. sororia]7.7e-5594.59Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDECKEKKACQCPECSCKNTWGSY+CSCSGDLLY+R HDTCISKASSGRSAWTAVWVI+IGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPN+VNENRA
Subjt:  EVPNYVNENRA

XP_004136938.1 vacuolar-sorting receptor 3 [Cucumis sativus]1.5e-5595.5Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDEC+EKKACQCPECSCKNTWGSY+CSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGL MAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

XP_008455032.1 PREDICTED: vacuolar-sorting receptor 3-like [Cucumis melo]1.5e-5595.5Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDEC+EKKACQCPECSCKNTWGSY+CSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGL MAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

XP_023553795.1 vacuolar-sorting receptor 3-like isoform X1 [Cucurbita pepo subsp. pepo]7.7e-5594.59Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDECKEKKACQCPECSCKNTWGSY+CSCSGDLLY+R HDTCISKASSGRSAWTAVWVI+IGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPN+VNENRA
Subjt:  EVPNYVNENRA

XP_038888975.1 vacuolar-sorting receptor 3-like [Benincasa hispida]8.2e-5798.2Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

TrEMBL top hitse value%identityAlignment
A0A0A0K7Q9 EGF-like domain-containing protein7.5e-5695.5Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDEC+EKKACQCPECSCKNTWGSY+CSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGL MAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

A0A1S3BZI6 vacuolar-sorting receptor 3-like7.5e-5695.5Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDEC+EKKACQCPECSCKNTWGSY+CSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGL MAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

A0A5A7SQF6 Vacuolar-sorting receptor 3-like7.5e-5695.5Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDEC+EKKACQCPECSCKNTWGSY+CSCSGDLLYIRDHDTCISKASSGRSAWTAVWVI+IGL MAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPNYVNENRA
Subjt:  EVPNYVNENRA

A0A6J1GNN8 vacuolar-sorting receptor 3-like3.7e-5594.59Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDECKEKKACQCPECSCKNTWGSY+CSCSGDLLY+R HDTCISKASSGRSAWTAVWVI+IGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPN+VNENRA
Subjt:  EVPNYVNENRA

A0A6J1I538 vacuolar-sorting receptor 3-like6.3e-5594.59Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
        +IDECKEKKACQCPECSCKNTWGSY CSCSGDLLY+R HDTCISKASSGRSAWTAVWVI+IGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQA

Query:  EVPNYVNENRA
        EVPN+VNENRA
Subjt:  EVPNYVNENRA

SwissProt top hitse value%identityAlignment
O22925 Vacuolar-sorting receptor 29.8e-3767.35Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS
        +++EC+EK ACQC +C CKNTWGSYECSCSG LLYIR+HD CI++ + G  +W  +W+I++GL  AA GAY VYKYR+R+YMDSEIRAIMAQYMPLD+
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS

O80977 Vacuolar-sorting receptor 32.3e-4981.25Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISK  +  RSAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         E+PN+VN+ RA
Subjt:  AEVPNYVNENRA

P93026 Vacuolar-sorting receptor 15.4e-3563.37Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCI--SKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS
        ++DECKEK  CQCPEC CKNTWGSYECSCS  LLY+R+HDTCI   K  + + +W+ +W+++IG+ +A    Y VYKYR+RSYMD+EIR IMAQYMPL+S
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCI--SKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS

Query:  Q
        Q
Subjt:  Q

P93484 Vacuolar-sorting receptor 13.0e-4677.48Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISK-ASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +IDECK+KKACQCPECSCKNTWGSY CSCSGDLLYI+D DTCISK AS  +S W A WV++I LAM AGG +LVYKYR+R YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISK-ASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENR
         E PN+VN  R
Subjt:  AEVPNYVNENR

Q56ZQ3 Vacuolar-sorting receptor 41.1e-4880.36Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLY+RDHDTCISK  S  +SAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         EVPN+ N+ RA
Subjt:  AEVPNYVNENRA

Arabidopsis top hitse value%identityAlignment
AT2G14720.1 vacuolar sorting receptor 47.9e-5080.36Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLY+RDHDTCISK  S  +SAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         EVPN+ N+ RA
Subjt:  AEVPNYVNENRA

AT2G14720.2 vacuolar sorting receptor 47.9e-5080.36Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLY+RDHDTCISK  S  +SAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         EVPN+ N+ RA
Subjt:  AEVPNYVNENRA

AT2G14740.1 vaculolar sorting receptor 31.6e-5081.25Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISK  +  RSAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         E+PN+VN+ RA
Subjt:  AEVPNYVNENRA

AT2G14740.2 vaculolar sorting receptor 31.6e-5081.25Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ
        +I+ECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISK  +  RSAW AVW+I++ L +AA GAYLVYKYRLR YMDSEIRAIMAQYMPLDSQ
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSG-RSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQ

Query:  AEVPNYVNENRA
         E+PN+VN+ RA
Subjt:  AEVPNYVNENRA

AT2G30290.1 VACUOLAR SORTING RECEPTOR 27.0e-3867.35Show/hide
Query:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS
        +++EC+EK ACQC +C CKNTWGSYECSCSG LLYIR+HD CI++ + G  +W  +W+I++GL  AA GAY VYKYR+R+YMDSEIRAIMAQYMPLD+
Subjt:  NIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATCTACAATATTGACGAGTGCAAAGAGAAGAAAGCCTGTCAGTGCCCTGAATGTAGCTGCAAAAATACCTGGGGTAGCTATGAGTGCAGTTGCAGTGGTGATCT
TTTGTATATCAGAGACCATGATACTTGTATAAGCAAGGCATCTAGTGGAAGATCTGCCTGGACTGCTGTTTGGGTTATTGTGATAGGCTTGGCTATGGCTGCTGGTGGAG
CATACCTAGTATACAAGTACAGATTAAGGTCATACATGGATTCAGAAATCAGAGCTATTATGGCTCAGTACATGCCTCTTGACAGCCAGGCTGAAGTTCCAAACTATGTC
AATGAAAATCGTGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGATCTACAATATTGACGAGTGCAAAGAGAAGAAAGCCTGTCAGTGCCCTGAATGTAGCTGCAAAAATACCTGGGGTAGCTATGAGTGCAGTTGCAGTGGTGATCT
TTTGTATATCAGAGACCATGATACTTGTATAAGCAAGGCATCTAGTGGAAGATCTGCCTGGACTGCTGTTTGGGTTATTGTGATAGGCTTGGCTATGGCTGCTGGTGGAG
CATACCTAGTATACAAGTACAGATTAAGGTCATACATGGATTCAGAAATCAGAGCTATTATGGCTCAGTACATGCCTCTTGACAGCCAGGCTGAAGTTCCAAACTATGTC
AATGAAAATCGTGCGTAA
Protein sequenceShow/hide protein sequence
MTIYNIDECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKASSGRSAWTAVWVIVIGLAMAAGGAYLVYKYRLRSYMDSEIRAIMAQYMPLDSQAEVPNYV
NENRA