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Spg003955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S29
Genome locationscaffold4:2334263..2336375
RNA-Seq ExpressionSpg003955
SyntenySpg003955
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EAZ20624.1 hypothetical protein OsJ_36239 [Oryza sativa Japonica Group]2.2e-1751.55Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM
        MGHSNVWNSHPKNYGPGSR C        L+             PG+R+ SW DQ+VRA+VLQT+LPQQRQG+ +HQVPL       P   V  W++
Subjt:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM

KHN30432.1 hypothetical protein glysoja_033170 [Glycine soja]3.2e-1668.25Show/hide
Query:  MGHSNVWNSHPKNYGPGSRT--CRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQV
        MGHSNVWNSHPKNYGPGSRT    +L  +P + +SSWIDQ++ AYVLQ +LP+Q QGNW+HQV
Subjt:  MGHSNVWNSHPKNYGPGSRT--CRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQV

TQE10756.1 hypothetical protein C1H46_003659 [Malus baccata]3.0e-0652.73Show/hide
Query:  LPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLS--LPLKKVNGWN
        LP + K SW+D +V A VLQ +LPQQ QG+W+HQVPLNG+  S  L +K    W+
Subjt:  LPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLS--LPLKKVNGWN

VFQ81205.1 unnamed protein product [Cuscuta campestris]9.4e-0850.77Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGLRKSSWIDQKVRAYVLQ--TMLPQQRQGNWIHQVPL
        MGHSN+WN+HPKNYGPGSR CR       +         +R Y +    + PQQ QG+WIHQVPL
Subjt:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGLRKSSWIDQKVRAYVLQ--TMLPQQRQGNWIHQVPL

XP_037477571.1 uncharacterized protein LOC119354910 isoform X2 [Triticum dicoccoides]4.0e-0655.56Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQ
        +GHSNVWNSHPKNYG GS  C        L + +W D +VRA VLQ + PQQR+
Subjt:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQ

TrEMBL top hitse value%identityAlignment
A0A0B2RF08 Uncharacterized protein1.6e-1668.25Show/hide
Query:  MGHSNVWNSHPKNYGPGSRT--CRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQV
        MGHSNVWNSHPKNYGPGSRT    +L  +P + +SSWIDQ++ AYVLQ +LP+Q QGNW+HQV
Subjt:  MGHSNVWNSHPKNYGPGSRT--CRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQV

A0A0E0JAX2 Uncharacterized protein4.9e-1852.58Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM
        MGHSNVWNSHPKNYGPGSR C        LE             PG+R+ SW DQ+VRA+VLQT+LPQQRQG+ +HQVPL       P   V  W++
Subjt:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM

A0A0E0RHR1 Uncharacterized protein4.9e-1852.58Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM
        MGHSNVWNSHPKNYGPGSR C        LE             PG+R+ SW DQ+VRA+VLQT+LPQQRQG+ +HQVPL       P   V  W++
Subjt:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM

A0A4D9BYH1 Small subunit ribosomal protein S29e3.7e-1869.12Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTC----RNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLN
        MGHSN+WNSHPKNYGPGSRTC     +    P +RKSSW +QKV A VLQT+LPQQ +GNW+HQVPLN
Subjt:  MGHSNVWNSHPKNYGPGSRTC----RNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLN

A3CHR1 Uncharacterized protein1.1e-1751.55Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM
        MGHSNVWNSHPKNYGPGSR C        L+             PG+R+ SW DQ+VRA+VLQT+LPQQRQG+ +HQVPL       P   V  W++
Subjt:  MGHSNVWNSHPKNYGPGSRTC------RNLEVL-----------PGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNM

SwissProt top hitse value%identityAlignment
Q4PM47 40S ribosomal protein S296.6e-0472.73Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGH N+W SHP+ YGPGSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR

Q5I7K3 40S ribosomal protein S299.2e-0690.91Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGHSNVWNSHPKNYG GSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR

Q5UAL3 40S ribosomal protein S296.6e-0456.67Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGL
        MGH+N+W SHP+ YG GSR+CR+     GL
Subjt:  MGHSNVWNSHPKNYGPGSRTCRNLEVLPGL

Q680P8 40S ribosomal protein S297.0e-0690.91Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGHSNVWNSHPK YGPGSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR

Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein5.0e-0790.91Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGHSNVWNSHPK YGPGSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR

AT3G44010.1 Ribosomal protein S14p/S29e family protein5.0e-0790.91Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGHSNVWNSHPK YGPGSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR

AT4G33865.1 Ribosomal protein S14p/S29e family protein5.0e-0790.91Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCR
        MGHSNVWNSHPK YGPGSR CR
Subjt:  MGHSNVWNSHPKNYGPGSRTCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACTCGAACGTCTGGAACTCTCACCCTAAGAACTATGGTCCCGGCTCTCGCACCTGCCGGAACTTGGAAGTTTTGCCGGGTTTGCGGAAATCCTCATGGATTGA
TCAGAAAGTACGGGCTTATGTGCTGCAGACAATGCTTCCGCAGCAACGCCAAGGAAATTGGATTCATCAAGTACCGTTAAATGGCCAAGTTTTGTCTCTCCCATTAAAGA
AGGTTAATGGATGGAATATGGCACAGCTGGATAGGCTTTGTGAATCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACTCGAACGTCTGGAACTCTCACCCTAAGAACTATGGTCCCGGCTCTCGCACCTGCCGGAACTTGGAAGTTTTGCCGGGTTTGCGGAAATCCTCATGGATTGA
TCAGAAAGTACGGGCTTATGTGCTGCAGACAATGCTTCCGCAGCAACGCCAAGGAAATTGGATTCATCAAGTACCGTTAAATGGCCAAGTTTTGTCTCTCCCATTAAAGA
AGGTTAATGGATGGAATATGGCACAGCTGGATAGGCTTTGTGAATCTGAGTAA
Protein sequenceShow/hide protein sequence
MGHSNVWNSHPKNYGPGSRTCRNLEVLPGLRKSSWIDQKVRAYVLQTMLPQQRQGNWIHQVPLNGQVLSLPLKKVNGWNMAQLDRLCESE