; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003996 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003996
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold4:3006950..3014003
RNA-Seq ExpressionSpg003996
SyntenySpg003996
Gene Ontology termsNA
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]6.2e-2637.91Show/hide
Query:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQT---QQ
        D+G+EK +   D     ++  +++AE +    S E+     K  S+ K  L  + ++   E     I+W +T++++RR FH+DW +I+D +++QT   + 
Subjt:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQT---QQ

Query:  SYIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
         +   PF  DKALL     ++A+LL  N GW T GP  VK E W+ ++H  T VIPSYGGW RFR I LH+W+L TF  IG+
Subjt:  SYIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]1.4e-2538.46Show/hide
Query:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQS--
        D+G+EK +   D     ++  +++AE +    S E+     K  S+ K  L  L ++   E     I+W +T++++RR FH+DW +I+D +++QT +   
Subjt:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQS--

Query:  -YIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
         +   PF  DKALL     ++A+LL  N GW T GP  VK E W+ + H  T VIPSYGGW RFR I LH+W+L TF  IG+
Subjt:  -YIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-2344.03Show/hide
Query:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR
        + G ++ +T++ITRR FH+DW RI+ +++KQ++ ++   PF  DKA+L     + A+LL +N+   GW T G   VK E W+ N+H   SVIPSYGGW+R
Subjt:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR

Query:  FRNILLHLWSLATFKAIG-------DIGRETWQI
        FR I LHLW+  TF+ IG       D+ +ET Q+
Subjt:  FRNILLHLWSLATFKAIG-------DIGRETWQI

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-2344.03Show/hide
Query:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR
        + G ++ +T++ITRR FH+DW RI+ +++KQ++ ++   PF  DKA+L     + A+LL +N+   GW T G   VK E W+ N+H   SVIPSYGGW+R
Subjt:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR

Query:  FRNILLHLWSLATFKAIG-------DIGRETWQI
        FR I LHLW+  TF+ IG       D+ +ET Q+
Subjt:  FRNILLHLWSLATFKAIG-------DIGRETWQI

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]5.6e-4355.63Show/hide
Query:  RTLKSAKKPNLQDLWNQE------------AGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANRGW
        ++L    K N +D+  +E            AG  EV+ +NW ET+VITRRDFH+DW RIL  +++QT+ SYIINPF  DKAL+KCP+ ++A LL  N+GW
Subjt:  RTLKSAKKPNLQDLWNQE------------AGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANRGW

Query:  VTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
        VTFGP+TVK+E WNP +HGR  + PSYG W++ RNI LHLWSLATFKAIG+
Subjt:  VTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein3.0e-2637.91Show/hide
Query:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQT---QQ
        D+G+EK +   D     ++  +++AE +    S E+     K  S+ K  L  + ++   E     I+W +T++++RR FH+DW +I+D +++QT   + 
Subjt:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQT---QQ

Query:  SYIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
         +   PF  DKALL     ++A+LL  N GW T GP  VK E W+ ++H  T VIPSYGGW RFR I LH+W+L TF  IG+
Subjt:  SYIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

A0A5A7TRS9 DUF4283 domain-containing protein6.7e-2638.46Show/hide
Query:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQS--
        D+G+EK +   D     ++  +++AE +    S E+     K  S+ K  L  L ++   E     I+W +T++++RR FH+DW +I+D +++QT +   
Subjt:  DEGEEKEKLVLDG---HKNMNRSFAEALRGEPSGEAHRRTLK--SAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQS--

Query:  -YIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
         +   PF  DKALL     ++A+LL  N GW T GP  VK E W+ + H  T VIPSYGGW RFR I LH+W+L TF  IG+
Subjt:  -YIINPFLPDKALLKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein1.8e-2344.03Show/hide
Query:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR
        + G ++ +T++ITRR FH+DW RI+ +++KQ++ ++   PF  DKA+L     + A+LL +N+   GW T G   VK E W+ N+H   SVIPSYGGW+R
Subjt:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR

Query:  FRNILLHLWSLATFKAIG-------DIGRETWQI
        FR I LHLW+  TF+ IG       D+ +ET Q+
Subjt:  FRNILLHLWSLATFKAIG-------DIGRETWQI

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein1.1e-2344.03Show/hide
Query:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR
        + G ++ +T++ITRR FH+DW RI+ +++KQ++ ++   PF  DKA+L     + A+LL +N+   GW T G   VK E W+ N+H   SVIPSYGGW+R
Subjt:  VKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANR---GWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIR

Query:  FRNILLHLWSLATFKAIG-------DIGRETWQI
        FR I LHLW+  TF+ IG       D+ +ET Q+
Subjt:  FRNILLHLWSLATFKAIG-------DIGRETWQI

A0A6J1D6X4 uncharacterized protein LOC1110181862.7e-4355.63Show/hide
Query:  RTLKSAKKPNLQDLWNQE------------AGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANRGW
        ++L    K N +D+  +E            AG  EV+ +NW ET+VITRRDFH+DW RIL  +++QT+ SYIINPF  DKAL+KCP+ ++A LL  N+GW
Subjt:  RTLKSAKKPNLQDLWNQE------------AGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKALLKCPTGEMARLLTANRGW

Query:  VTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD
        VTFGP+TVK+E WNP +HGR  + PSYG W++ RNI LHLWSLATFKAIG+
Subjt:  VTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGD

SwissProt top hitse value%identityAlignment
Q402F3 Tobamovirus multiplication protein 39.0e-0472.41Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPI
        LVE++PS+LVLFILRKLPP+R   +YHPI
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPI

Q402F4 Tobamovirus multiplication protein 13.7e-0579.31Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPI
        LVE++PSALVL+ILRKLPP+RVS +YHPI
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPI

Q9FEG2 Tobamovirus multiplication protein 11.6e-0580Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE
        +VEV+PSALVLFILRKLPP+RVS +YHPI+
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE

Arabidopsis top hitse value%identityAlignment
AT1G14530.1 Protein of unknown function (DUF1084)3.2e-0466.67Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE
        LVE++PS+LVLFILRKLPP+R   +YH I+
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE

AT1G14530.2 Protein of unknown function (DUF1084)3.2e-0466.67Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE
        LVE++PS+LVLFILRKLPP+R   +YH I+
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE

AT2G02180.1 tobamovirus multiplication protein 35.4e-0468.97Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPI
        LVE++PS+LVLFILRKLPP+R   +YH I
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPI

AT4G21790.1 tobamovirus multiplication 11.2e-0680Show/hide
Query:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE
        +VEV+PSALVLFILRKLPP+RVS +YHPI+
Subjt:  LVEVVPSALVLFILRKLPPRRVSDRYHPIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGCCAAGGGGACGAAGGGGAAGAAAAGGAAAAGTTGGTTTTGGACGGCCATAAGAACATGAACAGATCCTTCGCTGAAGCCTTGAGGGGGGAACCCTCGGGGGA
AGCTCACAGGAGAACCTTGAAGAGTGCGAAAAAACCAAACCTCCAGGATCTTTGGAATCAAGAAGCGGGAGAGACGGAAGTCAAAGGTATAAACTGGAATGAGACTCTTG
TGATCACTAGAAGAGATTTTCATGAAGATTGGGGGAGGATTCTAGACACAATCCAAAAACAAACTCAACAGTCATATATTATTAACCCCTTTCTTCCCGACAAAGCCCTG
CTTAAATGCCCCACGGGGGAAATGGCTCGTCTGCTAACGGCGAACAGGGGATGGGTTACCTTCGGTCCTCTGACAGTGAAAGTCGAATATTGGAACCCGAATATTCATGG
AAGAACCTCAGTTATTCCCTCTTATGGTGGGTGGATTAGATTTAGGAACATTCTTCTGCATTTATGGAGCTTGGCCACATTTAAAGCGATTGGGGATATAGGTCGGGAAA
CATGGCAGATTCTCGCCGGAGGCGGCGATGAGTTTTTTTTTGGTTCGGAGAAGGGCTACAGTCCAAACCCAGTGGACATTTGGCGTGTGCAAGATGGTGACTTTTGTCCA
GCGGTTAATATCATGTACCCCTATCTCCCCATCATGGGAGATGTGATGGGCGCTAATCCGAATGTTCAAATCGAGGTCAGGAAAAGCCCTGCTCTTAAACAGAGGGATAA
TCAAAACTCTCCCATGGGACCCACTCAGTTGACTACAGTCCAAAATGACGCTCTGCTTAAGGAAAACCCCATCTCGAAACCTGGAACCCAATCAAAAAAGAAAAAGAAGA
AAGGGAAATCAGTGGCCTTTGAGAATGGATCCAAATCCCAAGCTTCCATGAAAAGGGGGCAAATCTTCTCAACGAATAACCAGAACCCAACTGAGAGACGAGAAGAAAAA
GATGTTGAACTCGGATATGAGGCTTCGTTTCTGAGCATCAGTAGTGTGGAAGAGTGTCCCGGAGAAGATGTTGAAGAGCCCACGACTGACAAGGAGGACCCTCCTTCTGA
TTTCTACATGTGCTTTAGAGAAGAAGAGTCGCAGGATCTCATGGGGGGTGAAGAGAGAGCCTTGATTCCGGTGCAGCCTCAGGAAACGTTCGGAAATACTCCCCTTATAG
TTAACAGAGATCAACAGGATGGGAACGGGTCAGAAGGCGAAGGGGATTTTCCTTTCTCTAGGCAAATGGTGAAGAATCTAAAGAAGTGGAACATGTGGAACAAGGACTCG
TTTGGCCACATCACAGATACAAAACGTTCCATCATGGGGAGGATCGATGATATAGACAAGATAGAGGAAAATGGGGGCATGTCCAGTGGGGTTGGAAGTGATAAAGCTCT
ATGGTGCCTCGAGAAATCAGGTATTTTCTCCTCAAAATCTGCTTTCTTGGAGCTGGCAGAAAGCCTTATCCCCGCTGGTCTGTTCTTTGTGTTGAGGAATGCTGAGTTTT
TGGACCACATTTTTCTCCATTGCCCTTTTGCTTATGCGGCTTGGAGGTGGTTGCTGGGGGAATTTAACATCTATGTTTCTCTCCCTGAAAAGATTGATGTGTGGCTGGAT
GAGGTGTTATCGGGTTGGAATTTTAAAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTGATGTGGAACCTTTTGCTTGAGAGAAATCGTCGGTTGGTAGA
GGTTGTTCCTTCGGCATTGGTTCTGTTTATACTGAGAAAACTTCCTCCAAGGCGTGTATCTGATCGGTATCACCCCATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGCCAAGGGGACGAAGGGGAAGAAAAGGAAAAGTTGGTTTTGGACGGCCATAAGAACATGAACAGATCCTTCGCTGAAGCCTTGAGGGGGGAACCCTCGGGGGA
AGCTCACAGGAGAACCTTGAAGAGTGCGAAAAAACCAAACCTCCAGGATCTTTGGAATCAAGAAGCGGGAGAGACGGAAGTCAAAGGTATAAACTGGAATGAGACTCTTG
TGATCACTAGAAGAGATTTTCATGAAGATTGGGGGAGGATTCTAGACACAATCCAAAAACAAACTCAACAGTCATATATTATTAACCCCTTTCTTCCCGACAAAGCCCTG
CTTAAATGCCCCACGGGGGAAATGGCTCGTCTGCTAACGGCGAACAGGGGATGGGTTACCTTCGGTCCTCTGACAGTGAAAGTCGAATATTGGAACCCGAATATTCATGG
AAGAACCTCAGTTATTCCCTCTTATGGTGGGTGGATTAGATTTAGGAACATTCTTCTGCATTTATGGAGCTTGGCCACATTTAAAGCGATTGGGGATATAGGTCGGGAAA
CATGGCAGATTCTCGCCGGAGGCGGCGATGAGTTTTTTTTTGGTTCGGAGAAGGGCTACAGTCCAAACCCAGTGGACATTTGGCGTGTGCAAGATGGTGACTTTTGTCCA
GCGGTTAATATCATGTACCCCTATCTCCCCATCATGGGAGATGTGATGGGCGCTAATCCGAATGTTCAAATCGAGGTCAGGAAAAGCCCTGCTCTTAAACAGAGGGATAA
TCAAAACTCTCCCATGGGACCCACTCAGTTGACTACAGTCCAAAATGACGCTCTGCTTAAGGAAAACCCCATCTCGAAACCTGGAACCCAATCAAAAAAGAAAAAGAAGA
AAGGGAAATCAGTGGCCTTTGAGAATGGATCCAAATCCCAAGCTTCCATGAAAAGGGGGCAAATCTTCTCAACGAATAACCAGAACCCAACTGAGAGACGAGAAGAAAAA
GATGTTGAACTCGGATATGAGGCTTCGTTTCTGAGCATCAGTAGTGTGGAAGAGTGTCCCGGAGAAGATGTTGAAGAGCCCACGACTGACAAGGAGGACCCTCCTTCTGA
TTTCTACATGTGCTTTAGAGAAGAAGAGTCGCAGGATCTCATGGGGGGTGAAGAGAGAGCCTTGATTCCGGTGCAGCCTCAGGAAACGTTCGGAAATACTCCCCTTATAG
TTAACAGAGATCAACAGGATGGGAACGGGTCAGAAGGCGAAGGGGATTTTCCTTTCTCTAGGCAAATGGTGAAGAATCTAAAGAAGTGGAACATGTGGAACAAGGACTCG
TTTGGCCACATCACAGATACAAAACGTTCCATCATGGGGAGGATCGATGATATAGACAAGATAGAGGAAAATGGGGGCATGTCCAGTGGGGTTGGAAGTGATAAAGCTCT
ATGGTGCCTCGAGAAATCAGGTATTTTCTCCTCAAAATCTGCTTTCTTGGAGCTGGCAGAAAGCCTTATCCCCGCTGGTCTGTTCTTTGTGTTGAGGAATGCTGAGTTTT
TGGACCACATTTTTCTCCATTGCCCTTTTGCTTATGCGGCTTGGAGGTGGTTGCTGGGGGAATTTAACATCTATGTTTCTCTCCCTGAAAAGATTGATGTGTGGCTGGAT
GAGGTGTTATCGGGTTGGAATTTTAAAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTGATGTGGAACCTTTTGCTTGAGAGAAATCGTCGGTTGGTAGA
GGTTGTTCCTTCGGCATTGGTTCTGTTTATACTGAGAAAACTTCCTCCAAGGCGTGTATCTGATCGGTATCACCCCATTGAATGA
Protein sequenceShow/hide protein sequence
MNGQGDEGEEKEKLVLDGHKNMNRSFAEALRGEPSGEAHRRTLKSAKKPNLQDLWNQEAGETEVKGINWNETLVITRRDFHEDWGRILDTIQKQTQQSYIINPFLPDKAL
LKCPTGEMARLLTANRGWVTFGPLTVKVEYWNPNIHGRTSVIPSYGGWIRFRNILLHLWSLATFKAIGDIGRETWQILAGGGDEFFFGSEKGYSPNPVDIWRVQDGDFCP
AVNIMYPYLPIMGDVMGANPNVQIEVRKSPALKQRDNQNSPMGPTQLTTVQNDALLKENPISKPGTQSKKKKKKGKSVAFENGSKSQASMKRGQIFSTNNQNPTERREEK
DVELGYEASFLSISSVEECPGEDVEEPTTDKEDPPSDFYMCFREEESQDLMGGEERALIPVQPQETFGNTPLIVNRDQQDGNGSEGEGDFPFSRQMVKNLKKWNMWNKDS
FGHITDTKRSIMGRIDDIDKIEENGGMSSGVGSDKALWCLEKSGIFSSKSAFLELAESLIPAGLFFVLRNAEFLDHIFLHCPFAYAAWRWLLGEFNIYVSLPEKIDVWLD
EVLSGWNFKGRGKILWSMAARALMWNLLLERNRRLVEVVPSALVLFILRKLPPRRVSDRYHPIE