; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004005 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004005
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMADS-box protein JOINTLESS-like isoform X2
Genome locationscaffold4:1182000..1183287
RNA-Seq ExpressionSpg004005
SyntenySpg004005
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136891.2 MADS-box protein SVP isoform X1 [Cucumis sativus]3.6e-3683.84Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++Q +LERH+SVHSENLPNLNEPSVELQLESNIRAKLNEEV+KK+HELRQMKGEELQGLG+EELKKLEKSLQGGLSRV EIMDG+N +L+SDI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

XP_022141961.1 MADS-box protein JOINTLESS-like isoform X1 [Momordica charantia]1.3e-3889.69Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV
        +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG+EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV

XP_022141962.1 MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia]1.3e-3889.69Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV
        +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG+EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV

XP_022971944.1 MADS-box protein JOINTLESS-like isoform X2 [Cucurbita maxima]4.7e-3685.86Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLGLEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

XP_031744925.1 MADS-box protein SVP isoform X2 [Cucumis sativus]3.6e-3683.84Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++Q +LERH+SVHSENLPNLNEPSVELQLESNIRAKLNEEV+KK+HELRQMKGEELQGLG+EELKKLEKSLQGGLSRV EIMDG+N +L+SDI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

TrEMBL top hitse value%identityAlignment
A0A6J1CKS2 MADS-box protein JOINTLESS-like isoform X16.4e-3989.69Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV
        +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG+EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV

A0A6J1CLA0 MADS-box protein JOINTLESS-like isoform X26.4e-3989.69Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV
        +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG+EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV

A0A6J1I4L2 MADS-box protein JOINTLESS-like isoform X32.3e-3685.86Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLGLEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

A0A6J1I8F3 MADS-box protein JOINTLESS-like isoform X12.3e-3685.86Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLGLEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

A0A6J1IA12 MADS-box protein JOINTLESS-like isoform X22.3e-3685.86Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI
        ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLGLEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI

SwissProt top hitse value%identityAlignment
O82794 MADS-box protein AGL246.0e-1047.5Show/hide
Query:  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTE
        M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EV+ KT +LR+++GE+L GL LEEL++LEK L+ GLSRV+E
Subjt:  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTE

Q69TG5 MADS-box transcription factor 553.3e-0845.71Show/hide
Query:  LQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        LQLE +  + LNE++ + + +LRQM+GEEL+GL +EEL+++EK+L+ GL RV    D + ++ IS+++RK
Subjt:  LQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

Q9FUY6 MADS-box protein JOINTLESS4.7e-1547.42Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        +M+ +LER   +HS+NL  L++PS+ELQL E++  ++L++E+ +K+H LRQM+GEELQGL +EEL++LE+SL+ GLSRV E    + +  I+ +++K
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

Q9FVC1 MADS-box protein SVP1.6e-1547.42Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        +M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    + +  IS++++K
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

Q9XJ66 MADS-box transcription factor 221.7e-1241.67Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        +M  +++++++ HS NL    +PS++L LE +  A LNE++ + +  LRQM+GEEL+GL ++EL++LEK+L+ GL RV    D + +E IS+++RK
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

Arabidopsis top hitse value%identityAlignment
AT2G22540.1 K-box region and MADS-box transcription factor family protein1.2e-1647.42Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        +M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    + +  IS++++K
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

AT2G22540.2 K-box region and MADS-box transcription factor family protein1.5e-1647.92Show/hide
Query:  MQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL+RV E    + +  IS++++K
Subjt:  MQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

AT3G57230.1 AGAMOUS-like 163.9e-0433.33Show/hide
Query:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK
        +M+ ++ER+S    E   + N+P+ E+Q      A L  ++       RQM GEEL GL +E L+ LE  L+  L  V    D   IE I  + R+
Subjt:  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK

AT4G24540.1 AGAMOUS-like 244.3e-1147.5Show/hide
Query:  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTE
        M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EV+ KT +LR+++GE+L GL LEEL++LEK L+ GLSRV+E
Subjt:  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACATCGTTCACGATAACGCCCGCACTATCCATATTTTATGGGAGGATATTTTGTCTCTTGGCTGCTTTTTGGTCTTCAGTTTCTAGCGACTTTTCCAATTATAA
TGCCTCGGACATTGCTCTTAATTGGAAGGCTATGCAGGGGCTACTTGAGAGGCATAGTAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGC
AGCTTGAGAGTAATATTCGAGCCAAGTTGAATGAAGAAGTTGATAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAAGAGCTTCAAGGATTGGGGCTGGAGGAACTT
AAGAAATTAGAGAAGTCGCTTCAAGGAGGACTCAGCCGTGTTACAGAAATAATGGATGGAAGAAATATTGAATTGATCAGTGATATTGAGAGGAAGGTAACCATTAAATT
ATACCCTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACATCGTTCACGATAACGCCCGCACTATCCATATTTTATGGGAGGATATTTTGTCTCTTGGCTGCTTTTTGGTCTTCAGTTTCTAGCGACTTTTCCAATTATAA
TGCCTCGGACATTGCTCTTAATTGGAAGGCTATGCAGGGGCTACTTGAGAGGCATAGTAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGC
AGCTTGAGAGTAATATTCGAGCCAAGTTGAATGAAGAAGTTGATAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAAGAGCTTCAAGGATTGGGGCTGGAGGAACTT
AAGAAATTAGAGAAGTCGCTTCAAGGAGGACTCAGCCGTGTTACAGAAATAATGGATGGAAGAAATATTGAATTGATCAGTGATATTGAGAGGAAGGTAACCATTAAATT
ATACCCTGATTAG
Protein sequenceShow/hide protein sequence
MITSFTITPALSIFYGRIFCLLAAFWSSVSSDFSNYNASDIALNWKAMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEEL
KKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTIKLYPD