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Spg004022 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004022
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA helicase
Genome locationscaffold4:2863069..2866627
RNA-Seq ExpressionSpg004022
SyntenySpg004022
Gene Ontology termsGO:0032508 - DNA duplex unwinding (biological process)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001208 - MCM domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR031327 - Mini-chromosome maintenance protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455167.1 PREDICTED: probable DNA helicase MCM9 isoform X1 [Cucumis melo]1.8e-1088Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
XP_008455168.1 PREDICTED: probable DNA helicase MCM9 isoform X3 [Cucumis melo]1.8e-1088Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
XP_008455169.1 PREDICTED: probable DNA helicase MCM9 isoform X4 [Cucumis melo]1.8e-1088Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
XP_016901680.1 PREDICTED: probable DNA helicase MCM9 isoform X2 [Cucumis melo]1.8e-1088Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
XP_022952902.1 probable DNA helicase MCM9 isoform X2 [Cucurbita moschata]1.8e-1088Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
TrEMBL top hitse value%identityAlignment
A0A5A7SLG2 DNA helicase8.6e-1188Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
A0A5D3C4S8 DNA helicase8.6e-1188Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
A0A6J1GLI2 DNA helicase8.6e-1188Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
A0A6J1I3C7 DNA helicase8.6e-1188Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
A0A6J1I4M2 DNA helicase8.6e-1188Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
SwissProt top hitse value%identityAlignment
B8B406 Probable DNA helicase MCM91.5e-1284Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNR+VITTGLGSTSAGLTV AVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
F1N2W9 DNA helicase MCM94.5e-0968Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLK+AAK++ R+V+TTG+GSTSAGLTV AVKD G    N E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
F4IFF3 Probable DNA helicase MCM96.7e-1386Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTV AVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
Q69QA6 Probable DNA helicase MCM91.5e-1284Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNR+VITTGLGSTSAGLTV AVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
Q9NXL9 DNA helicase MCM94.5e-0968Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLK+AAK++ R+V+TTG+GSTSAGLTV AVKD G    N E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
Arabidopsis top hitse value%identityAlignment
AT1G44900.1 minichromosome maintenance (MCM2/3/5) family protein4.5e-0456.76Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD
        T KSQFLK+  K   RAV TTG G+++ GLT A  KD
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD
AT1G44900.2 minichromosome maintenance (MCM2/3/5) family protein4.5e-0456.76Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD
        T KSQFLK+  K   RAV TTG G+++ GLT A  KD
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKD
AT2G07690.1 Minichromosome maintenance (MCM2/3/5) family protein3.4e-0446Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        T KSQFLKF  K +  AV T+G GS++AGLT + ++D        E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
AT2G07690.2 Minichromosome maintenance (MCM2/3/5) family protein3.4e-0446Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        T KSQFLKF  K +  AV T+G GS++AGLT + ++D        E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
AT2G14050.1 minichromosome maintenance 94.8e-1486Show/hide
Query:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV
        TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTV AVKDGG  ML  E GA+
Subjt:  TGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGTGACGTGTCGACGGCGACTTGCAAATCATGGACGGGGCGAGCTGGTGGTCGACGACGACTTGGAGGTGCGAGCGTTCGGATGCAGGAAGGTGATGGAGGA
TCTTGATCATATTCTTTGGAGTTGTGATTTTGCTTGTGCAGTCCGAAGTTGTACTGGAAAGTCACAGTTCTTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTA
CCACTGGATTAGGAAGCACTAGTGCCGGACTAACTGTTGCTGCTGTCAAGGATGGAGGACTTCTAATGCTAAATAAAGAACCTGGAGCAGTAAATGCTCAAACTCAAACT
GAGGAATGTCAGTTTAGGACGGAAAGAAGGGAGAGGGCGGAGGAAGATCTGGATGATATCCTTTGGAGTTGTGATTTTGTCTGGTCTATATGGGGTTTGTTCTTTGATGC
GTTCGGGTTGCAGGTTAGGAGTTTCAGTGACTACAGGGAGATGATCCGGGGAGTTCCTCATCCATTTGCCGTTTCGCGAGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGTGACGTGTCGACGGCGACTTGCAAATCATGGACGGGGCGAGCTGGTGGTCGACGACGACTTGGAGGTGCGAGCGTTCGGATGCAGGAAGGTGATGGAGGA
TCTTGATCATATTCTTTGGAGTTGTGATTTTGCTTGTGCAGTCCGAAGTTGTACTGGAAAGTCACAGTTCTTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTA
CCACTGGATTAGGAAGCACTAGTGCCGGACTAACTGTTGCTGCTGTCAAGGATGGAGGACTTCTAATGCTAAATAAAGAACCTGGAGCAGTAAATGCTCAAACTCAAACT
GAGGAATGTCAGTTTAGGACGGAAAGAAGGGAGAGGGCGGAGGAAGATCTGGATGATATCCTTTGGAGTTGTGATTTTGTCTGGTCTATATGGGGTTTGTTCTTTGATGC
GTTCGGGTTGCAGGTTAGGAGTTTCAGTGACTACAGGGAGATGATCCGGGGAGTTCCTCATCCATTTGCCGTTTCGCGAGATGGATAG
Protein sequenceShow/hide protein sequence
MRQVTCRRRLANHGRGELVVDDDLEVRAFGCRKVMEDLDHILWSCDFACAVRSCTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGLLMLNKEPGAVNAQTQT
EECQFRTERRERAEEDLDDILWSCDFVWSIWGLFFDAFGLQVRSFSDYREMIRGVPHPFAVSRDG