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Spg004048 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004048
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCYSTM domain-containing protein
Genome locationscaffold4:1565948..1567187
RNA-Seq ExpressionSpg004048
SyntenySpg004048
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD40851.1 TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera]5.2e-2791.04Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
EEF35140.1 conserved hypothetical protein [Ricinus communis]4.0e-2791.04Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
KAF9609677.1 hypothetical protein IFM89_017856 [Coptis chinensis]2.7e-2892.42Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFV
        M+DPKYAYPYP P  GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCLLDECCCDPSIIFV
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFV
KAG6571885.1 hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2993.94Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFV
        MSDPKYAYPYP P GGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSI+ V
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFV
XP_010254642.1 PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera]5.2e-2791.04Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
TrEMBL top hitse value%identityAlignment
A0A1U8A0R0 uncharacterized protein LOC1045955642.5e-2791.04Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
A0A2C9UQL9 CYSTM domain-containing protein4.3e-2789.55Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCL+DECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
A0A2P5FH35 Cysteine-rich transmembrane CYSTM domain containing protein3.3e-2789.55Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCDPSIIF++
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
A0A314Y8T5 CYSTM domain-containing protein3.3e-2787.88Show/hide
Query:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIF
        MSDPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCL+DECCCDPS++F
Subjt:  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIF
B9SMJ5 CYSTM domain-containing protein1.9e-2791.04Show/hide
Query:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
        MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCDPSIIFV+
Subjt:  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA
SwissProt top hitse value%identityAlignment
Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B1.3e-0450Show/hide
Query:  PKYAYP---YPAPQGGYYQGPPVMAPPQYAAPPPKRQ-----PGFLEGCLAALCCCCLLDEC
        P   YP   YP PQG   QG P    PQ   PP ++Q     PG LEGC+AALCC C+LD C
Subjt:  PKYAYP---YPAPQGGYYQGPPVMAPPQYAAPPPKRQ-----PGFLEGCLAALCCCCLLDEC
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.2e-0758.33Show/hide
Query:  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC
        P+  YP    PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCCLLD C
Subjt:  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC
Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH12.1e-0757.14Show/hide
Query:  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLLDEC
        PK  YP   YP    P  GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLLD C
Subjt:  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLLDEC
Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein1.3e-0437.65Show/hide
Query:  YPYPAPQGGY-----------YQGPPVMA--PPQYAAPPPKRQP---------------------GFLEGCLAALCCCCLLDECC
        YP P P GGY           YQG       P Q+  PPP   P                      F+ GCLAALCCCCLL+ECC
Subjt:  YPYPAPQGGY-----------YQGPPVMA--PPQYAAPPPKRQP---------------------GFLEGCLAALCCCCLLDECC
AT2G41420.1 proline-rich family protein8.8e-0958.33Show/hide
Query:  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC
        P+  YP    PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCCLLD C
Subjt:  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC
AT3G49845.1 unknown protein5.4e-0648.33Show/hide
Query:  PKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQP------GFLEGCLAALCCCCLLDEC
        P   YP   P    YQGPP   PP Y   PPK +       GF+EGCLA LCCC LL+ C
Subjt:  PKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQP------GFLEGCLAALCCCCLLDEC
AT4G33660.1 unknown protein3.8e-2068.92Show/hide
Query:  MSDPKYAYPYPAPQGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSII
        MSDPKYAYPYPAP G Y QG  PPV  PPQY          PPP R+ GFLEG LAALCCCCL+DECCCDP+II
Subjt:  MSDPKYAYPYPAPQGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSII
AT5G67600.1 unknown protein1.5e-0857.14Show/hide
Query:  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLLDEC
        PK  YP   YP    P  GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLLD C
Subjt:  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLLDEC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACCCCAAATATGCCTATCCCTACCCAGCTCCTCAAGGAGGTTATTATCAAGGACCGCCGGTGATGGCACCGCCGCAGTACGCCGCGCCGCCGCCCAAAAGACA
GCCAGGCTTCTTGGAGGGATGCCTTGCAGCCCTGTGCTGCTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCTTTGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACCCCAAATATGCCTATCCCTACCCAGCTCCTCAAGGAGGTTATTATCAAGGACCGCCGGTGATGGCACCGCCGCAGTACGCCGCGCCGCCGCCCAAAAGACA
GCCAGGCTTCTTGGAGGGATGCCTTGCAGCCCTGTGCTGCTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCTTTGTTGCTTGA
Protein sequenceShow/hide protein sequence
MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA