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Spg004056 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004056
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationscaffold4:2044968..2045994
RNA-Seq ExpressionSpg004056
SyntenySpg004056
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011598.1 hypothetical protein SDJN02_26504, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2581.48Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEGW
        MSYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAYG P PQH   Q+++VGF+EGW
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEGW

XP_022148715.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]1.5e-2889.87Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYGQPPPQ QQQQQQ VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

XP_022927665.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]4.3e-2887.34Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYGQPPPQ+ QQQ+Q+VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

XP_023529875.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]1.2e-2786.08Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSY++QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYGQPPPQ+ QQQ+Q+VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]4.4e-2582.5Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GY PKDAYPPPGYPPQGGYPPAGYP  GYPPPAYGPAYG P PQH   Q+++VGF+EG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

TrEMBL top hitse value%identityAlignment
A0A5A7SME1 Cysteine-rich and transmembrane domain-containing protein A-like6.9e-2479.27Show/hide
Query:  SYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPP-PAYGPAY-GQPPPQHQQQQQQQVGFLEGW
        SYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPP P YGPAY G PPPQ+Q  Q+++VGF+EGW
Subjt:  SYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPP-PAYGPAY-GQPPPQHQQQQQQQVGFLEGW

A0A6J1D3P4 cysteine-rich and transmembrane domain-containing protein WIH2-like7.1e-2989.87Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYGQPPPQ QQQQQQ VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

A0A6J1EPM1 cysteine-rich and transmembrane domain-containing protein WIH2-like2.1e-2887.34Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYGQPPPQ+ QQQ+Q+VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.8e-2481.25Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAYG P PQH   Q+++VGF+EG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

A0A6J1JP18 cysteine-rich and transmembrane domain-containing protein WIH2-like2.1e-2887.34Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MSYY+QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYGQPPPQ+ QQQ+Q+VGFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEG

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin7.4e-0768.63Show/hide
Query:  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ
        PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ
Subjt:  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ

Q17094 Rhodopsin (Fragment)7.4e-0768.63Show/hide
Query:  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ
        PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ
Subjt:  PPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQ

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B1.9e-1058.82Show/hide
Query:  SQPPPPVGVPPPQGYPPGGYPKDAYPPPG--YPPQGGYPPAGYPQPGYPPPAYG----PAYGQP----PPQHQQQQQQQVGFLEG
        SQ PP VGVPP   YP  G PKDAYPPPG  YP QG  PP GYPQ GYPP  Y     P  G P    PPQ QQQQ+   G LEG
Subjt:  SQPPPPVGVPPPQGYPPGGYPKDAYPPPG--YPPQGGYPPAGYPQPGYPPPAYG----PAYGQP----PPQHQQQQQQQVGFLEG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.2e-1971.26Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MS Y+Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    PP Y P Y  PPPQHQQQQ    GFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGQPPPQHQQQQQQQVGFLEG

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH11.0e-0858.97Show/hide
Query:  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQ--QQQQQVGFLEG
        Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PPPQ+ Q  QQ+Q  G LEG
Subjt:  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQ--QQQQQVGFLEG

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein1.6e-2071.26Show/hide
Query:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGQPPPQHQQQQQQQVGFLEG
        MS Y+Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    PP Y P Y  PPPQHQQQQ    GFLEG
Subjt:  MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGQPPPQHQQQQQQQVGFLEG

AT3G49845.1 unknown protein5.6e-1045.79Show/hide
Query:  YSQPPPPVGVPPPQGYPP-GGYPKDAYPPP-GYP----PQGGYPPAGYPQP-----------GYPPPAY--------------GPAYGQPPPQHQQQQQQ
        Y  P  PV  PPPQGYPP  GYP   YPPP GYP    PQ GYPPAGYP P           GYPPP Y               P YGQ PP++++ ++ 
Subjt:  YSQPPPPVGVPPPQGYPP-GGYPKDAYPPP-GYP----PQGGYPPAGYPQP-----------GYPPPAY--------------GPAYGQPPPQHQQQQQQ

Query:  QVGFLEG
          GF+EG
Subjt:  QVGFLEG

AT5G45350.1 proline-rich family protein4.9e-0656.06Show/hide
Query:  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYGQPPP
        PP G PPP  YPP GYP+  YPPP   YPP  GYPP  YP    GYPP P YG     P YG  PP
Subjt:  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYGQPPP

AT5G45350.2 proline-rich family protein4.9e-0656.06Show/hide
Query:  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYGQPPP
        PP G PPP  YPP GYP+  YPPP   YPP  GYPP  YP    GYPP P YG     P YG  PP
Subjt:  PPVGVPPPQGYPPGGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYGQPPP

AT5G67600.1 unknown protein7.3e-1058.97Show/hide
Query:  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQ--QQQQQVGFLEG
        Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PPPQ+ Q  QQ+Q  G LEG
Subjt:  YSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQ--QQQQQVGFLEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACAGTCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGGAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCA
GGGCGGTTATCCTCCTGCCGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCAACCTCCGCCTCAACATCAACAACAACAACAGCAACAAG
TTGGATTCCTTGAAGGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTACTACAGTCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGGAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCA
GGGCGGTTATCCTCCTGCCGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCAACCTCCGCCTCAACATCAACAACAACAACAGCAACAAG
TTGGATTCCTTGAAGGCTGGTAA
Protein sequenceShow/hide protein sequence
MSYYSQPPPPVGVPPPQGYPPGGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGQPPPQHQQQQQQQVGFLEGW