; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004077 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004077
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:2350692..2353906
RNA-Seq ExpressionSpg004077
SyntenySpg004077
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588707.1 hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3875.86Show/hide
Query:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP
        A T+VQANA LF RKVKQLRRQ SS A  S         K+ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD DGVDDL+P
Subjt:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP

Query:  DSDPSPGPRFAAVFGA
        D+ PSPGPR AAV GA
Subjt:  DSDPSPGPRFAAVFGA

XP_022148740.1 uncharacterized protein LOC111017332 [Momordica charantia]1.2e-4271.54Show/hide
Query:  SESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCW
        SE   V   M     AV+ANA + LR++KQLRRQ SSFAMES AKE    Q+++ ETEP PYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSR+CW
Subjt:  SESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCW

Query:  FRDSDGVDDLHPDSDPSPGPRFAAVFGARD
        FRDSDGVDD +PD +PS GPRFAA FG +D
Subjt:  FRDSDGVDDLHPDSDPSPGPRFAAVFGARD

XP_022927901.1 uncharacterized protein LOC111434665 [Cucurbita moschata]2.2e-4464.63Show/hide
Query:  NHFSKGPINWIFPERNFSELSCLASDFPGKFSEFSFSESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNS
        NHFSK PINW FP +    L+     FPGKF       +      MAR  T+VQANA LF R VKQLRRQ SS A  S         K+ETETEPL YNS
Subjt:  NHFSKGPINWIFPERNFSELSCLASDFPGKFSEFSFSESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNS

Query:  STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGA
        STWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD DGVDDL+PD+ PSPGPR AAV GA
Subjt:  STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGA

XP_022989019.1 uncharacterized protein LOC111486209 [Cucurbita maxima]1.1e-3875.86Show/hide
Query:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP
        A T+VQANA LF RKVKQLRRQ SS A  S         K+ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD DGVDDL+P
Subjt:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP

Query:  DSDPSPGPRFAAVFGA
        D+ PSPGPR AAV GA
Subjt:  DSDPSPGPRFAAVFGA

XP_038887565.1 uncharacterized protein LOC120077680 [Benincasa hispida]5.3e-4676.03Show/hide
Query:  MARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDD
        MAR C AVQANA LFLRK++QLRRQ SSF +ES  ++AP+ ++DETETE L YNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFS+LCWFRDSDG+DD
Subjt:  MARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDD

Query:  LHPDSDPSPGPRFAAVFGARD
        L+ D+D SP PRFA VF  RD
Subjt:  LHPDSDPSPGPRFAAVFGARD

TrEMBL top hitse value%identityAlignment
A0A0A0K7S0 Uncharacterized protein2.9e-3472.28Show/hide
Query:  VQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDP
        +QAN  LFLRK+KQL+ Q     ++ST+++A + + DETETE LPYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASF RLCWFRDSD VDDL+PD D 
Subjt:  VQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDP

Query:  S
        S
Subjt:  S

A0A1S3C0N8 uncharacterized protein LOC1034952986.6e-3467.59Show/hide
Query:  MARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDD
        M+R    +QAN  LFLRK+KQL+RQ  S  ++ST+++  + + DETET+ LPYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSD VDD
Subjt:  MARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDD

Query:  LHPDSDPS
        L+ +++ S
Subjt:  LHPDSDPS

A0A6J1D3R9 uncharacterized protein LOC1110173325.9e-4371.54Show/hide
Query:  SESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCW
        SE   V   M     AV+ANA + LR++KQLRRQ SSFAMES AKE    Q+++ ETEP PYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSR+CW
Subjt:  SESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCW

Query:  FRDSDGVDDLHPDSDPSPGPRFAAVFGARD
        FRDSDGVDD +PD +PS GPRFAA FG +D
Subjt:  FRDSDGVDDLHPDSDPSPGPRFAAVFGARD

A0A6J1EIT6 uncharacterized protein LOC1114346651.1e-4464.63Show/hide
Query:  NHFSKGPINWIFPERNFSELSCLASDFPGKFSEFSFSESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNS
        NHFSK PINW FP +    L+     FPGKF       +      MAR  T+VQANA LF R VKQLRRQ SS A  S         K+ETETEPL YNS
Subjt:  NHFSKGPINWIFPERNFSELSCLASDFPGKFSEFSFSESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNS

Query:  STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGA
        STWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD DGVDDL+PD+ PSPGPR AAV GA
Subjt:  STWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGA

A0A6J1JN70 uncharacterized protein LOC1114862095.2e-3975.86Show/hide
Query:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP
        A T+VQANA LF RKVKQLRRQ SS A  S         K+ETETEPL YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS + WFRD DGVDDL+P
Subjt:  ACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP

Query:  DSDPSPGPRFAAVFGA
        D+ PSPGPR AAV GA
Subjt:  DSDPSPGPRFAAVFGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein1.8e-0465.38Show/hide
Query:  SSTWVPHPRTGIYFPQGHEWVMKDVP
        +S+WVPH  TGIY+P+G E VM+DVP
Subjt:  SSTWVPHPRTGIYFPQGHEWVMKDVP

AT3G19550.1 unknown protein2.4e-1240.59Show/hide
Query:  TAVQANASLFLRKVKQL--RRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP
        T +     L LR  KQ   R  +SS A +S      + +              +WVPHPRTGI+FP G E VM+DVP  AASF    W R+ DGVD   P
Subjt:  TAVQANASLFLRKVKQL--RRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHP

Query:  D
        D
Subjt:  D


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCAGAGGCGAAACCGACAAATGGGATGGGTCAAGACCGAAGGGGTCGGGCACTTTACCCGACCCCCCTGCTCGGCCTTGGACCAAGGCCGAGGCCGAGTCCCA
CCGACTCCGCTCGGTCCCTGCAGCCTCCAGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACACCTCCGAATTCCTGAAAACCCTAGGATGAGCAGCATCGGAGACGGTG
TGGCTAGCACCACACCGGTGTGCAGGTTTACCCTTTTGCAGGCCACATCTTCTCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGAATCACTTTTCC
AAAGGCCCTATAAATTGGATTTTCCCAGAAAGAAACTTCTCAGAATTAAGCTGTTTGGCTTCGGATTTTCCCGGAAAGTTTTCTGAATTTTCTTTCTCAGAAAGTGCTTC
TGTGTTTCATTTTATGGCAAGGGCTTGTACGGCTGTTCAAGCAAATGCATCATTGTTTCTTAGGAAAGTGAAGCAATTGAGGCGCCAATTGAGCAGCTTTGCAATGGAGT
CCACAGCCAAAGAAGCCCCACATGATCAAAAAGATGAGACAGAAACAGAGCCACTGCCCTACAACTCATCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCT
CAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAGCTTCCTTCTCTCGGCTTTGCTGGTTCCGGGACTCCGATGGCGTCGACGACCTCCACCCCGACTCCGA
CCCCTCTCCCGGGCCTCGGTTCGCCGCTGTTTTCGGCGCCCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCCAGAGGCGAAACCGACAAATGGGATGGGTCAAGACCGAAGGGGTCGGGCACTTTACCCGACCCCCCTGCTCGGCCTTGGACCAAGGCCGAGGCCGAGTCCCA
CCGACTCCGCTCGGTCCCTGCAGCCTCCAGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACACCTCCGAATTCCTGAAAACCCTAGGATGAGCAGCATCGGAGACGGTG
TGGCTAGCACCACACCGGTGTGCAGGTTTACCCTTTTGCAGGCCACATCTTCTCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGAATCACTTTTCC
AAAGGCCCTATAAATTGGATTTTCCCAGAAAGAAACTTCTCAGAATTAAGCTGTTTGGCTTCGGATTTTCCCGGAAAGTTTTCTGAATTTTCTTTCTCAGAAAGTGCTTC
TGTGTTTCATTTTATGGCAAGGGCTTGTACGGCTGTTCAAGCAAATGCATCATTGTTTCTTAGGAAAGTGAAGCAATTGAGGCGCCAATTGAGCAGCTTTGCAATGGAGT
CCACAGCCAAAGAAGCCCCACATGATCAAAAAGATGAGACAGAAACAGAGCCACTGCCCTACAACTCATCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCT
CAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAGCTTCCTTCTCTCGGCTTTGCTGGTTCCGGGACTCCGATGGCGTCGACGACCTCCACCCCGACTCCGA
CCCCTCTCCCGGGCCTCGGTTCGCCGCTGTTTTCGGCGCCCGGGATTGA
Protein sequenceShow/hide protein sequence
MDPRGETDKWDGSRPKGSGTLPDPPARPWTKAEAESHRLRSVPAASSRPGSAWFVLKHLRIPENPRMSSIGDGVASTTPVCRFTLLQATSSPALKQIHCRLSRGAKNHFS
KGPINWIFPERNFSELSCLASDFPGKFSEFSFSESASVFHFMARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFP
QGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGARD