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Spg004088 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004088
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein HAPLESS 2 isoform X1
Genome locationscaffold4:2467719..2468304
RNA-Seq ExpressionSpg004088
SyntenySpg004088
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK30002.1 protein HAPLESS 2 isoform X1 [Cucumis melo var. makuwa]3.4e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSLAS  FSAIGK+FGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
XP_011653782.1 uncharacterized protein LOC101218855 isoform X3 [Cucumis sativus]3.4e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSLAS  FSAIGK+FGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
XP_022154011.1 uncharacterized protein LOC111021352 [Momordica charantia]1.5e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASS+ASGFFSA+GK+F SPLDFLSGKSC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
XP_038897053.1 uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]8.9e-0685.71Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSL SG FSAIGKVFGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
XP_038897054.1 uncharacterized protein LOC120085227 isoform X2 [Benincasa hispida]8.9e-0685.71Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSL SG FSAIGKVFGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
TrEMBL top hitse value%identityAlignment
A0A0A0L1V0 Uncharacterized protein1.6e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSLAS  FSAIGK+FGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
A0A1S4DVV8 protein HAPLESS 2 isoform X11.6e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSLAS  FSAIGK+FGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
A0A5D3E285 Protein HAPLESS 2 isoform X11.6e-0582.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASSLAS  FSAIGK+FGSPLDFLSG+SC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
A0A6J1DMF3 uncharacterized protein LOC1110213527.4e-0682.86Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNVASS+ASGFFSA+GK+F SPLDFLSGKSC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
A0A803QLH3 Uncharacterized protein2.1e-0845.88Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLVPFLYVSLAFLIMWLLPFSVWINMGFHLLHRKFLRFQFVKDGHGLDPFILC
        MGNV  S  SGF    G +F SPLDFLSGKSC                    S+W NMGFHLLHR+FL  QF K G  +   + C
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLVPFLYVSLAFLIMWLLPFSVWINMGFHLLHRKFLRFQFVKDGHGLDPFILC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21722.1 unknown protein9.5e-0665.71Show/hide
Query:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV
        MGNV  S  +GF  +IG  FGSPLDFLSGKSC  V
Subjt:  MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATGTGGCCAGTTCATTGGCTTCTGGGTTCTTTTCGGCCATTGGCAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAAGTCTTGCAGGTTGGTACCATT
TCTTTATGTTTCTCTTGCTTTTCTGATCATGTGGCTTCTACCCTTCAGTGTGTGGATCAACATGGGATTTCATTTGCTACATAGAAAATTTCTGCGTTTCCAATTTGTTA
AAGATGGGCATGGTCTTGATCCTTTCATACTTTGTGATTTTGGATTGGCCATGTCCAAAATAACTAAAAATGGCATGACAAAAGCGAATTTGATCGTTTTGAAAACATTT
CCAAAAATGCCCTTGGTTCTGTTAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAATGTGGCCAGTTCATTGGCTTCTGGGTTCTTTTCGGCCATTGGCAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAAGTCTTGCAGGTTGGTACCATT
TCTTTATGTTTCTCTTGCTTTTCTGATCATGTGGCTTCTACCCTTCAGTGTGTGGATCAACATGGGATTTCATTTGCTACATAGAAAATTTCTGCGTTTCCAATTTGTTA
AAGATGGGCATGGTCTTGATCCTTTCATACTTTGTGATTTTGGATTGGCCATGTCCAAAATAACTAAAAATGGCATGACAAAAGCGAATTTGATCGTTTTGAAAACATTT
CCAAAAATGCCCTTGGTTCTGTTAGCATAG
Protein sequenceShow/hide protein sequence
MGNVASSLASGFFSAIGKVFGSPLDFLSGKSCRLVPFLYVSLAFLIMWLLPFSVWINMGFHLLHRKFLRFQFVKDGHGLDPFILCDFGLAMSKITKNGMTKANLIVLKTF
PKMPLVLLA