; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004096 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004096
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIB domain-containing protein
Genome locationscaffold4:2371543..2374269
RNA-Seq ExpressionSpg004096
SyntenySpg004096
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927946.1 uncharacterized protein LOC111434699 [Cucurbita moschata]8.1e-5989.13Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGE SLL  RASAT SSVK  YQ PP NL FARTVTFAS+SNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]3.6e-5987.68Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STF+SGEPSLLV+RASA  SSVK  YQLP PNLRF+RT+TFAS+SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_022989003.1 uncharacterized protein LOC111486197 [Cucurbita maxima]2.1e-5989.86Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGE SLL  RASATSSSVK  YQ PP NL FARTVTFAS+SNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]3.6e-5987.68Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STF+SGEPSLLV+RASA  SSVK  YQLP PNLRF+RT+TFAS+SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIW HIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KP+DKK+IICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]6.0e-6292.75Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAFLSTFISGEPSLLV +ASAT++SVK  YQLP PNLRFARTVTFAS+SNQATAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A6J1D4Q4 uncharacterized protein LOC1110172916.4e-5481.16Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STF SGEP+LLV+RASA  SS+K   QLPP NLRF R VTFA++S+QATASRR+PRGIMKPR ISPEMQALVG PEISRTQALKVIW HIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        +P +KK+I+CDEKLKKIFGGKDEVGFL+IAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1EIX1 uncharacterized protein LOC1114346993.9e-5989.13Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGE SLL  RASAT SSVK  YQ PP NL FARTVTFAS+SNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552441.8e-5987.68Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STF+SGEPSLLV+RASA  SSVK  YQLP PNLRF+RT+TFAS+SNQ TAS RQPRGIMKPRRISPEMQALVGAPEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710826.7e-5987.68Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STF+SGE SLL++RASA  SSVK  YQLP PNLRF+RT+TFAS+SNQATAS RQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKLKKIFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861971.0e-5989.86Show/hide
Query:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGE SLL  RASATSSSVK  YQ PP NL FARTVTFAS+SNQATAS+RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp279.4e-1045.45Show/hide
Query:  KPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIF
        KP ++SP++   +G  ++SR Q +K +W +IK H+LQ P+DK+ I+CD+KLK +F
Subjt:  KPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIF

Q05024 Protein TRI13.2e-1050Show/hide
Query:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGK
        +S  +Q  +G+ E+ RTQ +K+IW +IKEH+LQ P D++ I+CDEK++ IFG K
Subjt:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGK

Q08747 Upstream activation factor subunit UAF301.4e-0848.08Show/hide
Query:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFG
        +S  + +L+G  E++RT+ ++ +WA+IK HNLQ P++KK I+CDEKL+ I G
Subjt:  ISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFG

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.1e-1844.33Show/hide
Query:  RTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHF
        RT+   +++ +A     + +GI K R +S ++ +  G  E++R  ALK +W ++K HNLQ P++KK I CD+KLK IF GKD+VG  EI  L+SPHF
Subjt:  RTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHF

AT2G14880.1 SWIB/MDM2 domain superfamily protein6.2e-3365.42Show/hide
Query:  PPPNLRFARTVTFASSSNQATA-SRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAG
        P   LR  R VT A+ S++ TA ++R PRGIMKPR +SPEMQ +V  PEI+RTQALK IWA+IKEH+LQ P +K+ I+CDEKLKKIF G+D VGFLEIA 
Subjt:  PPPNLRFARTVTFASSSNQATA-SRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAG

Query:  LISPHFL
        LI PHFL
Subjt:  LISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.5e-1846.39Show/hide
Query:  RTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHF
        R +   ++S+    + RQ  GI+K   +S  +   +G  E+SRT A+K IW +IK +NLQ P +K+ I+CDE+LK IF GKD VGFLEI+ L+S HF
Subjt:  RTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.6e-2044.27Show/hide
Query:  GEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPR--GIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKV
        G  SLL   + ATSS V       P     A+      + + + A ++ PR  GI K   +SP +   +G  E SRT A+K IW +IK H+LQ P+DK+ 
Subjt:  GEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPR--GIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKV

Query:  IICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        I CDE LK IF GKD+VGFLEI+ L+SPHF+
Subjt:  IICDEKLKKIFGGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein4.0e-3256.83Show/hide
Query:  FLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVT---FASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNL
        F +TF+  + + L  R+S  S S   L    P NLR  R VT    ASS    T   R+PRGIMKPR +S  MQ +VG PEI RTQALK IWA+IKEH+L
Subjt:  FLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVT---FASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNL

Query:  QKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL
        Q P +K+ I+CDEKLKKIF GK+ VGFLEIA LI PHFL
Subjt:  QKPSDKKVIICDEKLKKIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCCTCTCCACCTTCATCTCCGGCGAACCGTCGCTCCTCGTCTCCAGAGCCTCCGCCACCTCCTCCTCCGTCAAGCCTCTCTATCAACTCCCTCCCCCGAATTT
GCGCTTCGCCCGTACCGTTACCTTTGCTTCGTCCTCCAACCAGGCCACTGCCTCCCGCCGGCAACCCCGTGGCATCATGAAGCCCCGGAGGATTTCGCCGGAGATGCAAG
CGCTTGTCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATCTGGGCTCACATTAAAGAACATAATCTTCAGAAACCTAGCGACAAGAAAGTCATAATTTGC
GATGAGAAGCTGAAGAAAATATTCGGAGGGAAAGATGAAGTCGGGTTTCTGGAGATTGCAGGGTTAATAAGTCCCCACTTCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCCTCTCCACCTTCATCTCCGGCGAACCGTCGCTCCTCGTCTCCAGAGCCTCCGCCACCTCCTCCTCCGTCAAGCCTCTCTATCAACTCCCTCCCCCGAATTT
GCGCTTCGCCCGTACCGTTACCTTTGCTTCGTCCTCCAACCAGGCCACTGCCTCCCGCCGGCAACCCCGTGGCATCATGAAGCCCCGGAGGATTTCGCCGGAGATGCAAG
CGCTTGTCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATCTGGGCTCACATTAAAGAACATAATCTTCAGAAACCTAGCGACAAGAAAGTCATAATTTGC
GATGAGAAGCTGAAGAAAATATTCGGAGGGAAAGATGAAGTCGGGTTTCTGGAGATTGCAGGGTTAATAAGTCCCCACTTCCTATAA
Protein sequenceShow/hide protein sequence
MAFLSTFISGEPSLLVSRASATSSSVKPLYQLPPPNLRFARTVTFASSSNQATASRRQPRGIMKPRRISPEMQALVGAPEISRTQALKVIWAHIKEHNLQKPSDKKVIIC
DEKLKKIFGGKDEVGFLEIAGLISPHFL