| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 1.6e-174 | 99.06 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKRTWVESCPTRVFELD VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 2.7e-174 | 98.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK TWVESCPTRVFELDPVTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 6.2e-171 | 96.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+D+AAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE++TWVESCPTRVFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 2.4e-170 | 96.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_038891253.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Benincasa hispida] | 4.8e-171 | 96.88 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCH+DQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALD+KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LM+TLT EEKRTWVESCPTRVFE D VTHQV VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 7.7e-175 | 99.06 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKRTWVESCPTRVFELD VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 1.3e-174 | 98.75 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSD+AAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK TWVESCPTRVFELDPVTHQVMVV+PEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.0e-171 | 96.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+D+AAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE++TWVESCPTRVFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 1.1e-170 | 96.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 1.1e-170 | 96.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSD+AAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELDPVTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 5.3e-48 | 40.69 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S ELD D YD + + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 3.8e-147 | 81.88 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 1.5e-135 | 76.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 1.8e-48 | 41.03 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S ELD D YD + + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 6.4e-70 | 49.49 | Show/hide |
Query: RFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
R P+++I E+++D F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CSVE
Subjt: RFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
L KC ++ DVTS DL S + V+PV S ++ E + I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+ T+ ++P I +N++ ++ LT
Subjt: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
Query: EEKRTWVESCPTRVFELDP--VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
++K WV SCPT+V+ P T QV + DP Y E KKAE+ GK LV + ++D FIFTVES+GA+K ++L AI I+K+KL ++
Subjt: EEKRTWVESCPTRVFELDP--VTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 1.9e-29 | 30.41 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDAAAATGEALDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P ++ + + + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDAAAATGEALDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 1.9e-29 | 30.41 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDAAAATGEALDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P ++ + + + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDAAAATGEALDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDPV---THQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 1.1e-136 | 76.56 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I + DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 7.3e-93 | 74.03 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ + ++T ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQV
+M TLT EEK +ES PT+VF +DPVT QV
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 2.7e-148 | 81.88 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDAAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ ++DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRTWVESCPTRVFELDPVTHQVMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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