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Spg004117 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004117
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhloem filament protein
Genome locationscaffold4:2853080..2853433
RNA-Seq ExpressionSpg004117
SyntenySpg004117
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588755.1 hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1041.41Show/hide
Query:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MAVVA+I  ND + +  +D  +   S W+ IP V +V V  IAKFAV+ YN+     + + ++ CGW++EL G      LH+VV D LG   +++VVVS
Subjt:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588756.1 hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1141.41Show/hide
Query:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MA V   APND + +  +D ++   S W+PIP+V ++ V  +AKFAVE YN++    + + N+ CGW++EL G      LHV V D LG   +++VVVS
Subjt:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588758.1 hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1042.42Show/hide
Query:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MAVVA+IA ND + +  +D  +   S W+ IP V +V V  IAKFAVE YN+     + + ++ CGW++EL G      LH+ V D LG   ++ VVVS
Subjt:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS

KAG6588759.1 hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1142.42Show/hide
Query:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MAVVA+IA ND + +  +D  +   S W+ IP V +V V  IAKFAV+ YN+     + + ++ CGW++EL G      LH+VV D LG   +++VVVS
Subjt:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS

XP_023522970.1 uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo]3.1e-1142.42Show/hide
Query:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS
        MAVVA IA ND + +  +D  +   S W+ IP V +V V  IAKFAV+ YN+     + + ++ CGW++EL G     HLH+ V D LG   +++VVVS
Subjt:  MAVVARIAPNDIVLK-AMDKSV---SNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVS

TrEMBL top hitse value%identityAlignment
A0A6J1EIQ8 uncharacterized protein LOC1114345175.0e-0739.24Show/hide
Query:  AMDKSVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV
        A  + V  W+ IP V    + ++AKFAVE++N + G    +N++  GWY+EL        LH+   DFLG  L  EVVV
Subjt:  AMDKSVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1ELQ9 uncharacterized protein LOC1114345151.6e-0540.79Show/hide
Query:  KSVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV
        K V  W  IP V D+ +  + KF +E   I+FG    F  +  GWY EL         HV V DFLG +LK EVV+
Subjt:  KSVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1JG70 uncharacterized protein LOC111486626 isoform X25.5e-0638.67Show/hide
Query:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV
        +V  W+ IP V    V E+AK AVEQ+N+Q G    ++++  GWY EL        LH+   DFL  +L  E +V
Subjt:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV

A0A6J1JKF7 uncharacterized protein LOC111486626 isoform X15.5e-0638.67Show/hide
Query:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV
        +V  W+ IP V    V E+AK AVEQ+N+Q G    ++++  GWY EL        LH+   DFL  +L  E +V
Subjt:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV

P94012 Phloem filament protein5.5e-0638.67Show/hide
Query:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV
        +V  W+ IP V    V E+AK AVEQ+N+Q G    ++++  GWY EL        LH+   DFL  +L  E +V
Subjt:  SVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTGTTGCTCGTATCGCTCCCAATGACATCGTCCTCAAGGCGATGGACAAAAGCGTGAGCAATTGGTTACCAATTCCCAGCGTATGGGATGTTATTGTGGATGA
AATTGCAAAGTTTGCCGTGGAACAATACAACATTCAATTTGGGGGACATTACACATTCAATAATGTTGATTGTGGTTGGTATGTGGAGCTGTCGGGTGGAAAATTTCTAG
TCCATCTTCATGTTGTGGTGACAGACTTTCTTGGTGGTACCTTAAAAATTGAGGTTGTTGTGTCTGTAGGACTCGATATTTTTGATCCCAAGAATTGGAACCTCGAAGCT
TTCAACCCCCTCGCAGTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTGTTGCTCGTATCGCTCCCAATGACATCGTCCTCAAGGCGATGGACAAAAGCGTGAGCAATTGGTTACCAATTCCCAGCGTATGGGATGTTATTGTGGATGA
AATTGCAAAGTTTGCCGTGGAACAATACAACATTCAATTTGGGGGACATTACACATTCAATAATGTTGATTGTGGTTGGTATGTGGAGCTGTCGGGTGGAAAATTTCTAG
TCCATCTTCATGTTGTGGTGACAGACTTTCTTGGTGGTACCTTAAAAATTGAGGTTGTTGTGTCTGTAGGACTCGATATTTTTGATCCCAAGAATTGGAACCTCGAAGCT
TTCAACCCCCTCGCAGTTAACTGA
Protein sequenceShow/hide protein sequence
MAVVARIAPNDIVLKAMDKSVSNWLPIPSVWDVIVDEIAKFAVEQYNIQFGGHYTFNNVDCGWYVELSGGKFLVHLHVVVTDFLGGTLKIEVVVSVGLDIFDPKNWNLEA
FNPLAVN