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Spg004137 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004137
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold9:14651484..14660961
RNA-Seq ExpressionSpg004137
SyntenySpg004137
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO99700.1 Retrotransposon gag protein [Corchorus capsularis]3.2e-0442.11Show/hide
Query:  EGGARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEF
        EG AR W  SLPS+S++SW EM ++FL KY P     +  KR+    Q  +E +H++
Subjt:  EGGARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEF

XP_008388875.2 uncharacterized protein LOC103451222 [Malus domestica]7.1e-0434.18Show/hide
Query:  ARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEFTASIYIAWNITPPLSEECWKVGPQT
        AR+WI +LPS S+++W+++  IFL KY+P +  ++   ++++  Q P E FHE       AW     L  +C   G  T
Subjt:  ARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEFTASIYIAWNITPPLSEECWKVGPQT

XP_018505701.1 PREDICTED: uncharacterized protein LOC103958290 [Pyrus x bretschneideri]5.4e-0432.56Show/hide
Query:  GARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEFTASIYIAWNITPPLSEECWKVGPQTGPLGPT
        GAR+W+ +LPS S++SW+++ + FL KY+P +  ++ + +++   Q P E  HE       AW     L  +C    P +G  G T
Subjt:  GARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEFTASIYIAWNITPPLSEECWKVGPQTGPLGPT

TrEMBL top hitse value%identityAlignment
A0A1R3JY09 Retrotransposon gag protein1.5e-0442.11Show/hide
Query:  EGGARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEF
        EG AR W  SLPS+S++SW EM ++FL KY P     +  KR+    Q  +E +H++
Subjt:  EGGARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGTCCAAGGCGCAAGCAAGGCGCTTTCCTACGGTTCATCTCCTGACTCTCTTAATTGCTCTTTTATGCTTATTATTTTGGGGCGGTTAATCAAGCCTTGGGG
CTTAGATATGGTTCGTCTATGGCCGTCTAAGCGCGGATCGCTTCCATGGGATGTCGAGGCGGTGAAAATACCAAAGCGGAGCACTCAAGACTTAAAAACAACATCAAACG
GTGCAAAATTGAAGCAGCCAAACAAGGAAGACCCGAGAGGTGGCGTCGAGACGCTACCTCACGACGTCTCGACACTACAAACTCAAAAGACCACTCAAATTGTTGTGGGT
GGCGTCTCGACGCTGTTTCGTTATTTAAATGCAGCAGTTTCACGATTTAGGCTTGTCTACGGTCGTCTTGAAGGGATTGAATCCCAAGCGGAAGCGGTTTTCACAGTTCG
TGTTTTAATTTCGATTATTCCGAATACCGGGGAAGAAGTGAATTCCATCTTGTATTGTCATGTCCCCAGCCCTCCACTCGATCTTGTCCCCAAGAAGGATACTCCCGCTG
GCATGTCTCCTACATGGACACCTTGGATCAATACATCTGTATCGAATACAAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGGGATAAGGCTGGGTACTTTATCCTA
GTGACACTATGGATACGGCCCACTTTGTATTTTGATACAAACGCAATGATCCAACGCGTTCGTGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTCCATCAGG
TCCCACCGGTAGCTCTATAAGGGCGTTGAGCGAGATCAAGACTTTTTCGCTGCTGGAATTTTCTGCAAATAGTAAGGGAAAAGGCGAAACGGATCAAGATCGTCTTCAAA
GATCCAGTGACAAATCTTTACAAGAGCAGACACTTCCCTACCAAGAAGCAAGGAAAAGGCAATTGAGCTTCATGGATATCTGGCAGACTCTCGACCCGTTGTCCACTGAG
ATAGAAAGGGTCGAGCGTGCAGTGCAAGTCTACTTTTCAGCTCCTAAATATCCACCACCTCCCTGCGTTGTTAATCACGAAGAAGGAGGAGCTAGGAAGTGGATTTTCTC
ATTGCCTTCAAGATCGGTATCTTCTTGGAGCGAGATGAGAAGTATTTTCCTAAAGAAGTACCACCCTACTACGCTGTTGATTGAAGACACCAAAAGAATGGTCAATGCGA
CGCAAGCGCCTGAGGAGTTGTTCCATGAGTTCACCGCTTCAATCTATATTGCATGGAACATCACACCCCCACTTTCAGAGGAGTGTTGGAAGGTTGGACCTCAAACAGGT
CCATTAGGTCCCACCAGTAGCTCGTGTAAGGCATTAAGGGGTAGGGCTGACGTCAGCGTTCGCTTCGCTGGCGTCAGCGACGCGCGGTCCAAGAGGATAGTGCGCGCGGT
CCAGCTTCAGCGGTCCGGTTCGGCAATTCGGTCCAAGAAGAGGAGCGGTTCACGTCTGGTTCACGCGGTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGTCCAAGGCGCAAGCAAGGCGCTTTCCTACGGTTCATCTCCTGACTCTCTTAATTGCTCTTTTATGCTTATTATTTTGGGGCGGTTAATCAAGCCTTGGGG
CTTAGATATGGTTCGTCTATGGCCGTCTAAGCGCGGATCGCTTCCATGGGATGTCGAGGCGGTGAAAATACCAAAGCGGAGCACTCAAGACTTAAAAACAACATCAAACG
GTGCAAAATTGAAGCAGCCAAACAAGGAAGACCCGAGAGGTGGCGTCGAGACGCTACCTCACGACGTCTCGACACTACAAACTCAAAAGACCACTCAAATTGTTGTGGGT
GGCGTCTCGACGCTGTTTCGTTATTTAAATGCAGCAGTTTCACGATTTAGGCTTGTCTACGGTCGTCTTGAAGGGATTGAATCCCAAGCGGAAGCGGTTTTCACAGTTCG
TGTTTTAATTTCGATTATTCCGAATACCGGGGAAGAAGTGAATTCCATCTTGTATTGTCATGTCCCCAGCCCTCCACTCGATCTTGTCCCCAAGAAGGATACTCCCGCTG
GCATGTCTCCTACATGGACACCTTGGATCAATACATCTGTATCGAATACAAAGCGGGTCGTATCACATAGTGTTACCAGGATAAGGGATAAGGCTGGGTACTTTATCCTA
GTGACACTATGGATACGGCCCACTTTGTATTTTGATACAAACGCAATGATCCAACGCGTTCGTGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTCCATCAGG
TCCCACCGGTAGCTCTATAAGGGCGTTGAGCGAGATCAAGACTTTTTCGCTGCTGGAATTTTCTGCAAATAGTAAGGGAAAAGGCGAAACGGATCAAGATCGTCTTCAAA
GATCCAGTGACAAATCTTTACAAGAGCAGACACTTCCCTACCAAGAAGCAAGGAAAAGGCAATTGAGCTTCATGGATATCTGGCAGACTCTCGACCCGTTGTCCACTGAG
ATAGAAAGGGTCGAGCGTGCAGTGCAAGTCTACTTTTCAGCTCCTAAATATCCACCACCTCCCTGCGTTGTTAATCACGAAGAAGGAGGAGCTAGGAAGTGGATTTTCTC
ATTGCCTTCAAGATCGGTATCTTCTTGGAGCGAGATGAGAAGTATTTTCCTAAAGAAGTACCACCCTACTACGCTGTTGATTGAAGACACCAAAAGAATGGTCAATGCGA
CGCAAGCGCCTGAGGAGTTGTTCCATGAGTTCACCGCTTCAATCTATATTGCATGGAACATCACACCCCCACTTTCAGAGGAGTGTTGGAAGGTTGGACCTCAAACAGGT
CCATTAGGTCCCACCAGTAGCTCGTGTAAGGCATTAAGGGGTAGGGCTGACGTCAGCGTTCGCTTCGCTGGCGTCAGCGACGCGCGGTCCAAGAGGATAGTGCGCGCGGT
CCAGCTTCAGCGGTCCGGTTCGGCAATTCGGTCCAAGAAGAGGAGCGGTTCACGTCTGGTTCACGCGGTTCGTTGA
Protein sequenceShow/hide protein sequence
MEGVQGASKALSYGSSPDSLNCSFMLIILGRLIKPWGLDMVRLWPSKRGSLPWDVEAVKIPKRSTQDLKTTSNGAKLKQPNKEDPRGGVETLPHDVSTLQTQKTTQIVVG
GVSTLFRYLNAAVSRFRLVYGRLEGIESQAEAVFTVRVLISIIPNTGEEVNSILYCHVPSPPLDLVPKKDTPAGMSPTWTPWINTSVSNTKRVVSHSVTRIRDKAGYFIL
VTLWIRPTLYFDTNAMIQRVRVVDMRVGVSCAMSPSGPTGSSIRALSEIKTFSLLEFSANSKGKGETDQDRLQRSSDKSLQEQTLPYQEARKRQLSFMDIWQTLDPLSTE
IERVERAVQVYFSAPKYPPPPCVVNHEEGGARKWIFSLPSRSVSSWSEMRSIFLKKYHPTTLLIEDTKRMVNATQAPEELFHEFTASIYIAWNITPPLSEECWKVGPQTG
PLGPTSSSCKALRGRADVSVRFAGVSDARSKRIVRAVQLQRSGSAIRSKKRSGSRLVHAVR