; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004237 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004237
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L33-like
Genome locationscaffold6:5824633..5826201
RNA-Seq ExpressionSpg004237
SyntenySpg004237
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577004.1 hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sororia]8.6e-6584.81Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+RLCLD ALSCG RNRFLCNS+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSI YGSVICMAKRYAPNTTKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEVK
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

KAG7015026.1 rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6585.44Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+RLCLD ALSCG RNRFLCNS+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEVK
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

XP_022922689.1 uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata]3.1e-6282.17Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+R CLD ALSCG RNRFLC+S+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIR+GSVICMA+RYAPN TKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEV
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEV
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEV

XP_022922690.1 uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata]1.1e-6282.28Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+R CLD ALSCG RNRFLC+S+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIR+GSVICMA+RYAPN TKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEVK
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

XP_023552499.1 uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo]2.1e-6382.91Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+RLC D ALSCG RNRFLC+S+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIR+GSV CMAKRYAPNTTKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEVK
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A5A7UZ21 50S ribosomal protein L33-like4.0e-6081.88Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLS--QSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPD
        MAT IQR CLDL LSCG+RN+FL NSSSS PSNF+TF S SF ATLS   S +PN+KG L Q A ERSIRYGSVICMAKRYAP+TTKRKRLSRKRGGDP 
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLS--QSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKKKTRRKGG++DFKIVRLSS A TGFFYAKKKSRKMADKIE+QKYDPIA RHVLFTEVK
Subjt:  KKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X11.5e-6282.17Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+R CLD ALSCG RNRFLC+S+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIR+GSVICMA+RYAPN TKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEV
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEV
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X25.1e-6382.28Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+R CLD ALSCG RNRFLC+S+SSTP +F++FK LSFSA LS SV+PN+K SLSQSARERSIR+GSVICMA+RYAPN TKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        KKTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTEVK
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

A0A6J1J250 uncharacterized protein LOC111482725 isoform X22.1e-6180.38Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+RLCL  AL CG RNRFLC+S+SSTP +F++FK LSFSA LS  V+PN+K SLSQSARERSIR+GSVICMA+RYAPNTTKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        +KTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTE K
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

A0A6J1J566 uncharacterized protein LOC111482725 isoform X12.1e-6180.38Show/hide
Query:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK
        MA  I+RLCL  AL CG RNRFLC+S+SSTP +F++FK LSFSA LS  V+PN+K SLSQSARERSIR+GSVICMA+RYAPNTTKRKRLSRKRGGDP+KK
Subjt:  MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        +KTRRKGG++DFKI+RLSS AGTGFFYAKKKSRKMADKIELQK+DP+AKRHVLFTE K
Subjt:  KKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK

SwissProt top hitse value%identityAlignment
B6IN38 50S ribosomal protein L331.3e-0750.98Show/hide
Query:  KRDFKIVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK
        K++  +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A++HV+F E K
Subjt:  KRDFKIVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK

Q2W1A2 50S ribosomal protein L335.0e-0754.35Show/hide
Query:  IVRLSSAAGTGFFY-AKKKSRKMADKIELQKYDPIAKRHVLFTEVK
        +++L S AGTGFFY AKK  RK  +K+E +KYDP+ ++HV F E K
Subjt:  IVRLSSAAGTGFFY-AKKKSRKMADKIELQKYDPIAKRHVLFTEVK

Q5FFJ4 50S ribosomal protein L334.5e-0854.35Show/hide
Query:  IVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK
        +V+L+S+AGTG+FY KK++ +K+ +K+  +KYDP+A++HVLFTE K
Subjt:  IVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK

Q5HBV6 50S ribosomal protein L334.5e-0854.35Show/hide
Query:  IVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK
        +V+L+S+AGTG+FY KK++ +K+ +K+  +KYDP+A++HVLFTE K
Subjt:  IVRLSSAAGTGFFYAKKKS-RKMADKIELQKYDPIAKRHVLFTEVK

Q9RSS4 50S ribosomal protein L338.5e-0754.35Show/hide
Query:  IVRLSSAAGTGFFYAKKKSRKMAD-KIELQKYDPIAKRHVLFTEVK
        IV++ S+AGTGF+Y   K+R+    K+EL+KYDP+AK+HV+F E K
Subjt:  IVRLSSAAGTGFFYAKKKSRKMAD-KIELQKYDPIAKRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein3.8e-1056.45Show/hide
Query:  DKKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRK-MADKIELQKYDPIAKRHVLFTEVK
        DK+KKT        F  +RL SAAGTGFFY K+KS K + +K+E +KYDP   RHVLFTE K
Subjt:  DKKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRK-MADKIELQKYDPIAKRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein3.8e-1056.45Show/hide
Query:  DKKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRK-MADKIELQKYDPIAKRHVLFTEVK
        DK+KKT        F  +RL SAAGTGFFY K+KS K + +K+E +KYDP   RHVLFTE K
Subjt:  DKKKKTRRKGGKRDFKIVRLSSAAGTGFFYAKKKSRK-MADKIELQKYDPIAKRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAGCAATTCAAAGGCTTTGTTTGGATTTGGCGCTTTCTTGTGGAAGAAGGAATCGATTTCTCTGCAATTCGTCTTCTTCAACTCCTTCAAACTTCCTCACTTT
CAAGTCTCTCTCCTTCTCTGCTACCCTCTCGCAGAGCGTCCTTCCCAATCTCAAAGGATCGTTGTCACAGAGCGCTCGGGAGAGATCAATCCGTTATGGATCTGTGATTT
GCATGGCCAAAAGATATGCTCCTAACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAGAAGACAAGGAGGAAAGGAGGAAAGAGA
GATTTCAAAATAGTCCGACTTTCCTCAGCAGCTGGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCCTAT
TGCAAAACGTCATGTTCTGTTCACTGAAGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAGCAATTCAAAGGCTTTGTTTGGATTTGGCGCTTTCTTGTGGAAGAAGGAATCGATTTCTCTGCAATTCGTCTTCTTCAACTCCTTCAAACTTCCTCACTTT
CAAGTCTCTCTCCTTCTCTGCTACCCTCTCGCAGAGCGTCCTTCCCAATCTCAAAGGATCGTTGTCACAGAGCGCTCGGGAGAGATCAATCCGTTATGGATCTGTGATTT
GCATGGCCAAAAGATATGCTCCTAACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGACAAGAAAAAGAAGACAAGGAGGAAAGGAGGAAAGAGA
GATTTCAAAATAGTCCGACTTTCCTCAGCAGCTGGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCCTAT
TGCAAAACGTCATGTTCTGTTCACTGAAGTCAAGTGA
Protein sequenceShow/hide protein sequence
MATAIQRLCLDLALSCGRRNRFLCNSSSSTPSNFLTFKSLSFSATLSQSVLPNLKGSLSQSARERSIRYGSVICMAKRYAPNTTKRKRLSRKRGGDPDKKKKTRRKGGKR
DFKIVRLSSAAGTGFFYAKKKSRKMADKIELQKYDPIAKRHVLFTEVK