; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004242 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004242
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich protein 5-like
Genome locationscaffold6:6396588..6399042
RNA-Seq ExpressionSpg004242
SyntenySpg004242
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577050.1 hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1966.17Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGG
        M+TYAIVLITCG VIA+ VIL C+C +G RKKKK    TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T   + GGG GGG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGG

Query:  DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
         GG +GGGDGGGGGCG   GGGC GGGCGGGCG
Subjt:  DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

XP_022931328.1 glycine-rich protein 5-like [Cucurbita moschata]1.3e-1765.93Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG
        M+TYAIVLITCG VIA+ VIL C+C +G RKKKK    TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T  + DGGGG GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG

Query:  G-DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
        G +GGGDG G  GGGGCG   GGGC GGGCGGGCG
Subjt:  G-DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

XP_022985127.1 glycine-rich protein 5-like [Cucurbita maxima]1.2e-1867.16Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG
        M+TYAIVLIT G VIA+ VIL C+C +G RKKKKT   TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T  S DGGGG GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG

Query:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
        G+GG DGGG  GGGGCG   GGGC GGGCGGGCG
Subjt:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

XP_023552868.1 glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo]4.0e-1967.16Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG
        M+TYAIVLITCG VIA+ VIL C+C +G RKKKK    TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T  S DGGGG GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG

Query:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
         +GGGDGGG  GGGGCG   GGGC GGGCGGGCG
Subjt:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

XP_038889436.1 acanthoscurrin-1-like [Benincasa hispida]2.1e-1562.79Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGG
        MKTY IVLITCGSVIA ++IL C+C+FG RK  K  T TY  +A   R  DLERGQ ++      GG+TILAGA  GLATAAV+T      G D  G GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGG

Query:  GDGGGDGG--GGGCGGGGCGGGGCGGGCG
        G GGG+GG  GGGCGGGGCGGGGCGGGCG
Subjt:  GDGGGDGG--GGGCGGGGCGGGGCGGGCG

TrEMBL top hitse value%identityAlignment
A0A0A0KVE1 Uncharacterized protein3.5e-1360.47Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGG
        MKTYAIVLI  GSVI AV+IL C+C+FG  +KKKT T       P+  L D+ERGQ  +      GGMTIL GA  GLATAAV+T ++   GG GGGD G
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGG

Query:  GDGGGDGGGGGCGGGGCG--GGGCGGGCG
          G GDGGGGG  GGGCG  GGGCGGGCG
Subjt:  GDGGGDGGGGGCGGGGCG--GGGCGGGCG

A0A2G9HGH5 Uncharacterized protein2.1e-1355Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRL------RDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSI--DGGG
        MK YA+VLI  GS+ A +++LCCLC  G RKKK+   +  +A+APRP L      RD+E+G++S+ +  K GGM +L GAG  +A  AV    I   GGG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRL------RDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSI--DGGG

Query:  GDGGGDGGGDGGGDGGGGG---CGGGGCGGGGCG--GGCG
        G GGG GGGDGGG GGG G   CGGGGCGGGGCG  GGCG
Subjt:  GDGGGDGGGDGGGDGGGGG---CGGGGCGGGGCG--GGCG

A0A2Z7BIQ3 Loricrin-like4.2e-1458.91Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTIL---AGAGVGLATAAVLTGSIDGGGGDGGG
        MK Y IVLITCGSV AA+++LCCLC  G +K++ T + T A + PR   RD+ERG+ ++ + AK+GGM IL   AGA   +A A+VL+G   GGGG GG 
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTIL---AGAGVGLATAAVLTGSIDGGGGDGGG

Query:  DGGGDGGGDGGGGGCGG-GGCGG-GGCGG
        DGGGD  GDG GGGCGG GGCGG GGCGG
Subjt:  DGGGDGGGDGGGGGCGG-GGCGG-GGCGG

A0A6J1EY84 glycine-rich protein 5-like6.2e-1865.93Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG
        M+TYAIVLITCG VIA+ VIL C+C +G RKKKK    TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T  + DGGGG GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG

Query:  G-DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
        G +GGGDG G  GGGGCG   GGGC GGGCGGGCG
Subjt:  G-DGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

A0A6J1J409 glycine-rich protein 5-like5.6e-1967.16Show/hide
Query:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG
        M+TYAIVLIT G VIA+ VIL C+C +G RKKKKT   TY +SA RP     RDLE G      EAK GGMTILAGA  GLATAAV+T  S DGGGG GG
Subjt:  MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPR---LRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTG-SIDGGGGDGG

Query:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG
        G+GG DGGG  GGGGCG   GGGC GGGCGGGCG
Subjt:  GDGGGDGGGDGGGGGCG---GGGCGGGGCGGGCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTACGCCATCGTTCTCATAACTTGCGGCTCTGTGATAGCCGCTGTGGTGATCTTGTGCTGTCTCTGTCAATTTGGGACTCGTAAAAAGAAGAAAACAAGAAC
GTCCACCTATGCAGCCAGTGCTCCAAGGCCAAGGCTGCGTGATCTTGAGCGCGGCCAAGACTCTCAAAGAACTGAAGCCAAGACTGGTGGGATGACTATTCTGGCTGGAG
CTGGTGTTGGTTTGGCTACTGCAGCTGTGCTTACTGGTTCTATTGATGGAGGAGGAGGGGATGGGGGAGGAGATGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCGGT
GGCTGTGGAGGTGGGGGCTGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGAGTGATCATTGTGTATTGTGTTTATACATTGGAAGGTCGTAAAAGAAAGGAAATGAGAAG
AGCTACAAGTACACCTAGTGCTCCAAATCCAGCGCCATCACAACAAACATATCATGATGTTGAACTCGAACAAGGCCCTCGAAAAAGTGAAACTGTGGACGGTGGGATGG
TTATTTTAGGTACGTACTACATCCATGGTCATCGATGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTTACGCCATCGTTCTCATAACTTGCGGCTCTGTGATAGCCGCTGTGGTGATCTTGTGCTGTCTCTGTCAATTTGGGACTCGTAAAAAGAAGAAAACAAGAAC
GTCCACCTATGCAGCCAGTGCTCCAAGGCCAAGGCTGCGTGATCTTGAGCGCGGCCAAGACTCTCAAAGAACTGAAGCCAAGACTGGTGGGATGACTATTCTGGCTGGAG
CTGGTGTTGGTTTGGCTACTGCAGCTGTGCTTACTGGTTCTATTGATGGAGGAGGAGGGGATGGGGGAGGAGATGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCGGT
GGCTGTGGAGGTGGGGGCTGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGAGTGATCATTGTGTATTGTGTTTATACATTGGAAGGTCGTAAAAGAAAGGAAATGAGAAG
AGCTACAAGTACACCTAGTGCTCCAAATCCAGCGCCATCACAACAAACATATCATGATGTTGAACTCGAACAAGGCCCTCGAAAAAGTGAAACTGTGGACGGTGGGATGG
TTATTTTAGGTACGTACTACATCCATGGTCATCGATGCCGGTGA
Protein sequenceShow/hide protein sequence
MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGGGDGGGDGGGG
GCGGGGCGGGGCGGGCGVIIVYCVYTLEGRKRKEMRRATSTPSAPNPAPSQQTYHDVELEQGPRKSETVDGGMVILGTYYIHGHRCR