; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004255 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004255
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin domain-containing protein
Genome locationscaffold6:6156786..6160233
RNA-Seq ExpressionSpg004255
SyntenySpg004255
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]5.3e-5695.65Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQT  DG+IKKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAE SLAQAIVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022142761.1 ubiquitin domain-containing protein 1-like [Momordica charantia]1.5e-5592.17Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS+TNGDG+ K+IRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]4.1e-5693.91Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAE SLAQAI+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022942916.1 ubiquitin domain-containing protein 1-like [Cucurbita moschata]9.1e-5693.04Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGC GSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]1.4e-5695.65Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDALRAAAEAE SLAQAI+DSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein2.6e-5695.65Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQT  DG+IKKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAE SLAQAIVDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1CN58 ubiquitin domain-containing protein 1-like7.5e-5692.17Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS+TNGDG+ K+IRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like2.0e-5693.91Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAE SLAQAI+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1FQA3 ubiquitin domain-containing protein 1-like4.4e-5693.04Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGC GSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X24.4e-5693.04Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGC GSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 13.3e-2449.58Show/hide
Query:  GCAGSSQTNGDGTIKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDERGAK
        G    +Q    G  + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIVD A + + +  LT CYDE G +
Subjt:  GCAGSSQTNGDGTIKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDERGAK

Query:  YELPNYVLSEPTNLIRDSS
        Y+LP Y L+ P NLI + S
Subjt:  YELPNYVLSEPTNLIRDSS

Q5EAE3 Ubiquitin domain-containing protein 27.3e-2447.97Show/hide
Query:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE
        +GS   N +GT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  LT CYDE
Subjt:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE

Query:  RGAKYELPNYVLSEPTNLIRDSS
         G +Y+LP Y L+ P N+I + S
Subjt:  RGAKYELPNYVLSEPTNLIRDSS

Q640W6 Ubiquitin domain-containing protein 12.5e-2448.78Show/hide
Query:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE
        +GS   N DGT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  LT CYDE
Subjt:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE

Query:  RGAKYELPNYVLSEPTNLIRDSS
         G +Y+LP Y L+ P N+I + S
Subjt:  RGAKYELPNYVLSEPTNLIRDSS

Q6DG43 Ubiquitin domain-containing protein 21.1e-2448.78Show/hide
Query:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE
        +GS   N DGT       + +++ KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA+A    +  LAQAI+D A + + +  LT CYDE
Subjt:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE

Query:  RGAKYELPNYVLSEPTNLIRDSS
         G +Y+LP Y LS P N+I + S
Subjt:  RGAKYELPNYVLSEPTNLIRDSS

Q6PGH0 Ubiquitin domain-containing protein 22.5e-2448.78Show/hide
Query:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE
        +GS   N DGT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  LT CYDE
Subjt:  AGSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ERSLAQAIVDSAGVIVQNADLTICYDE

Query:  RGAKYELPNYVLSEPTNLIRDSS
         G +Y+LP Y L+ P N+I + S
Subjt:  RGAKYELPNYVLSEPTNLIRDSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein4.2e-4372.32Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ERSLAQAIVDSAGVIVQNADLTICYDERGAKYEL
        MGC+ SS+T  +G  +KIR+PK WKHPQPI+R +LTQ+R+EFWDTAPHYGG+KEIWDALRAAAE  + SLAQ I++SAGVIVQN DLTICYDE+G+KYEL
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ERSLAQAIVDSAGVIVQNADLTICYDERGAKYEL

Query:  PNYVLSEPTNLI
        P YVL +P+NLI
Subjt:  PNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein5.0e-5283.64Show/hide
Query:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP
        MGCAGS+Q+  DG++KKIRKPKPWKH QPIT+++L +LR+EFWDTAPHYGGRKEIWDALRAAAEA+ SLAQAIVDSAGVIVQN DLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNL
         YVLSEPTNL
Subjt:  NYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein7.0e-4673.04Show/hide
Query:  MGCAGSSQTNGDGTI--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYE
        MGC GSSQ   +G    KKI KPKPW H +PITR+QLT +R+EFWDT+PHYGG++EIW+ALRAAAEA+  LAQ IVDSAGVIVQN DLT+C+DERGA+YE
Subjt:  MGCAGSSQTNGDGTI--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYE

Query:  LPNYVLSEPTNLIRD
        LP YVLSEPTNLIR+
Subjt:  LPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGAACCATAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACACA
ACTACGGGATGAGTTTTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGATGCACTACGAGCAGCTGCCGAAGCCGAGCGATCTCTTGCGCAAGCAATTG
TAGACAGCGCTGGGGTCATTGTTCAAAATGCAGATTTGACGATCTGTTACGACGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCGACCAATTTG
ATTCGTGACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGAACCATAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACACA
ACTACGGGATGAGTTTTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGATGCACTACGAGCAGCTGCCGAAGCCGAGCGATCTCTTGCGCAAGCAATTG
TAGACAGCGCTGGGGTCATTGTTCAAAATGCAGATTTGACGATCTGTTACGACGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCGACCAATTTG
ATTCGTGACAGTTCATAA
Protein sequenceShow/hide protein sequence
MGCAGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAERSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNL
IRDSS