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Spg004266 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004266
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranslation initiation factor IF-2
Genome locationscaffold6:6866609..6873187
RNA-Seq ExpressionSpg004266
SyntenySpg004266
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600462.1 hypothetical protein SDJN03_05695, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3895.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
KAG7031111.1 hypothetical protein SDJN02_05150 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3895.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
XP_022942601.1 uncharacterized protein LOC111447586 [Cucurbita moschata]1.9e-3895.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
XP_022980643.1 uncharacterized protein LOC111479946 [Cucurbita maxima]1.9e-3895.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
XP_038883040.1 uncharacterized protein LOC120074102 [Benincasa hispida]1.0e-3996.59Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EI+EETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQ+APNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+YK
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
TrEMBL top hitse value%identityAlignment
A0A1S3BT69 translation initiation factor IF-28.8e-3792.05Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQ VPL+KEIVD YSGPDRVTAK+QQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLV  FSQ+YK
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
A0A5D3CZK6 Translation initiation factor IF-28.8e-3792.05Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQ VPL+KEIVD YSGPDRVTAK+QQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLV  FSQ+YK
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
A0A6J1C8I7 uncharacterized protein LOC1110084061.0e-3794.38Show/hide
Query:  EIVEETM-QRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEE M QRVPLLKEIVDYYSGPDRVTAKQQQ ELERVAKTLPQSAPNS+KQFTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQQYK
Subjt:  EIVEETM-QRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
A0A6J1FPB3 uncharacterized protein LOC1114475869.4e-3995.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
A0A6J1IZW9 uncharacterized protein LOC1114799469.4e-3995.45Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        EIVEETMQRVPLLKEIVD YSGPDRVTAKQQQGELERVAKTLPQSAPNSVK+FTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQ+Y+
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53645.1 hydroxyproline-rich glycoprotein family protein7.9e-3069.32Show/hide
Query:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK
        E + E M + PL+KEIVD+YSGPDRVTAK+Q  EL+R+A TLP SAP+SVK+F +RA L+L+SNPGWGFDKK QFMDKLV E SQ YK
Subjt:  EIVEETMQRVPLLKEIVDYYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTTTGTCCTAGGCCTTATTCAAAAAGGCTTTACTGGGGCTTGAATACAGAAAGGGATGGGGGACCAAGGCAGTATGGGATGCCTTTGTACCACATTGGAAAGAT
ATGGGCTTCTGATGGGGTATACAAGTGGTTGGTTCTCCCTCCTCAATCGCCTGGCTTTTGGGGTGTGGCTCTCCAACTACTTAGATACCTAACAATTGGTATCAGAGCCG
GTGGTCGACGGCTTCGGAGTAATAGCCGGTGGTCGACAGCTTCGGAGAGGAGTGGCGGCGGAGGGGCTGACCGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCC
GAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGGCAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTGATGGGGATTATAGTGAGCAA
ACTGCAAAGGTGGTTGTCTCCAACTGAGTGGGTCTTGATGGTTGGAACTGAAGGCATTTCTAGGAACCTTTGGAAGGCTATCTCATCTATTGCCTTCTCTTTTACTGAGT
TTTTGAAGTTCTCAATTGGGGATGACTCGCTTGCTTCTAGTGCATTAACTGGCTTGGAAATCGTGGAAGAAACCATGCAGAGAGTTCCATTGTTAAAGGAGATAGTTGAT
TATTACAGTGGACCAGATAGAGTAACTGCAAAGCAACAACAGGGGGAGCTGGAAAGAGTCGCAAAAACACTTCCACAAAGTGCGCCTAATTCTGTAAAGCAGTTCACCAA
TCGTGCAGTTCTTTCTTTGCAGAGCAACCCAGGGTGGGGATTTGACAAGAAATGCCAGTTCATGGACAAGCTTGTGAGGGAGTTCTCCCAGCAATACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTTTGTCCTAGGCCTTATTCAAAAAGGCTTTACTGGGGCTTGAATACAGAAAGGGATGGGGGACCAAGGCAGTATGGGATGCCTTTGTACCACATTGGAAAGAT
ATGGGCTTCTGATGGGGTATACAAGTGGTTGGTTCTCCCTCCTCAATCGCCTGGCTTTTGGGGTGTGGCTCTCCAACTACTTAGATACCTAACAATTGGTATCAGAGCCG
GTGGTCGACGGCTTCGGAGTAATAGCCGGTGGTCGACAGCTTCGGAGAGGAGTGGCGGCGGAGGGGCTGACCGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCC
GAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGGCAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTGATGGGGATTATAGTGAGCAA
ACTGCAAAGGTGGTTGTCTCCAACTGAGTGGGTCTTGATGGTTGGAACTGAAGGCATTTCTAGGAACCTTTGGAAGGCTATCTCATCTATTGCCTTCTCTTTTACTGAGT
TTTTGAAGTTCTCAATTGGGGATGACTCGCTTGCTTCTAGTGCATTAACTGGCTTGGAAATCGTGGAAGAAACCATGCAGAGAGTTCCATTGTTAAAGGAGATAGTTGAT
TATTACAGTGGACCAGATAGAGTAACTGCAAAGCAACAACAGGGGGAGCTGGAAAGAGTCGCAAAAACACTTCCACAAAGTGCGCCTAATTCTGTAAAGCAGTTCACCAA
TCGTGCAGTTCTTTCTTTGCAGAGCAACCCAGGGTGGGGATTTGACAAGAAATGCCAGTTCATGGACAAGCTTGTGAGGGAGTTCTCCCAGCAATACAAGTAG
Protein sequenceShow/hide protein sequence
MPLCPRPYSKRLYWGLNTERDGGPRQYGMPLYHIGKIWASDGVYKWLVLPPQSPGFWGVALQLLRYLTIGIRAGGRRLRSNSRWSTASERSGGGGADRNQPSEASPCTAA
ETSAFRGGAIVRDQGSMGCLCPTLERYGLLMGIIVSKLQRWLSPTEWVLMVGTEGISRNLWKAISSIAFSFTEFLKFSIGDDSLASSALTGLEIVEETMQRVPLLKEIVD
YYSGPDRVTAKQQQGELERVAKTLPQSAPNSVKQFTNRAVLSLQSNPGWGFDKKCQFMDKLVREFSQQYK