| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7015092.1 DNA topoisomerase 3-alpha, partial [Cucurbita argyrosperma subsp. argyrosperma] | 3.7e-161 | 81.92 | Show/hide |
Query: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
MKFEAKRNFDF+ DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK I EV+ K S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+
Subjt: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
Query: T--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
T AQSEGGGSCFKCGKLGHWARDCDAPG GGSF+ASGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATN+M+Y
Subjt: T--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
Query: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW
GSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYRCPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT D SK + T R GSSCYKCGGEGHW
Subjt: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW
Query: ARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
ARDCSQS PSN SS G+CFKCGKPGHWARDCSN
Subjt: ARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| XP_022931285.1 cold shock domain-containing protein 3-like [Cucurbita moschata] | 3.7e-161 | 81.74 | Show/hide |
Query: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
MKFEAKRNFDF+ +DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK I EV+ K S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN
Subjt: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
Query: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
+T AQSEGGGSCFKCGKLGHWARDCDAPG GGSF+ SGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATN+M+
Subjt: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
Query: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYRCPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT DTSK + T R GSSCYKCGGEGH
Subjt: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
Query: WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
WARDCSQS PSN SS G+CFKCGKPGHWARDCSNC
Subjt: WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
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| XP_022984959.1 cold shock domain-containing protein 3-like [Cucurbita maxima] | 9.9e-167 | 83.82 | Show/hide |
Query: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
MKFEAKRNFDF+ +DD+DEDFLSEVAAAEARALASKRRKIPNH+I+PPK I EV++K S N D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN
Subjt: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
Query: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
+T AQS+GGGSCFKCGKLGHWARDCDAPG GGSF+AS N DTSVAEK+CPCG GVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATN+M+
Subjt: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
Query: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMA KNQ+SA+KVYGNT DTSK + T R GSSCYKCGGEGH
Subjt: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
Query: WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
WARDCSQS PSNPP AEFGR+QSS G+CFKCGKPGHWARDCSNC
Subjt: WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
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| XP_023552737.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo] | 9.0e-168 | 83.48 | Show/hide |
Query: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
MKFEAKRNFDF+ DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK + EV+ K S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN+
Subjt: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
Query: T--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
T AQSEGGGSCFKCGKLGHWARDCDAPG GGSF+ASGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKC VRQENGGCGFFEWCDNAS+TN+M+Y
Subjt: T--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
Query: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW
GSQNRASSSSFSDL+CPCGAG CI LTAKTG+NVGQQFYRCPSYQATCGFFQWCKEPSMA KNQ S +KVYGNT DTSK + T R GSSCYKCGGEGHW
Subjt: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHW
Query: ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
ARDCSQS PSNPP AEFGR+QSS G+CFKCGKPGHWARDCSNC
Subjt: ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
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| XP_038903890.1 cold shock domain-containing protein 3-like [Benincasa hispida] | 7.4e-162 | 83.72 | Show/hide |
Query: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
MK EAKRNFDF+ E+DNDEDFLS VAAAEA ALASKRRKIPNH IDPPKN + EVSDK LN++ EG+YIAALKGNP +LSQISG NSGNKG SAN+
Subjt: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANS
Query: TAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGS
TAQSEGGGSCFKCGKLGHWARDCDAPGGGGSF+ASGN D SVAEKACPCGLGVC +LTANTERNRGRKFYKCPVRQENGGCGFFEWCD S +M+YGS
Subjt: TAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGS
Query: QNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTG--SSCYKCGGEGHW
QNRASSSSFSD+QCPCGAG CIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQ+SA+KVY NT+D SKS+A TVRTG SSCYKCGGEGHW
Subjt: QNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTG--SSCYKCGGEGHW
Query: ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSN
ARDCSQS NPP EFGRSQSS GTCFKCGKPGHWARDC+N
Subjt: ARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KVB6 Uncharacterized protein | 9.2e-118 | 70.75 | Show/hide |
Query: AAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAP
AAE +L K R +PN +ID PKN + EVS K LN+D G YIA KG+ LSQISG A+S N+TAQSEG GSCFKCGKLGHWARDCDAP
Subjt: AAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAP
Query: GGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTA
GGGGSF++SGN D SV +KACPCG G+C VLTANTERNRGRKFYKCPVRQENGGCGFFEWCD+AS NV+SYGSQN SSSFSDLQCPCGAG C ILTA
Subjt: GGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTA
Query: KTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRT--GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSH-
KTG NVG+QFY CPS QA+C FF+WC+EPSM TKNQ S KVYGNTNDTSKS V+T SS YK G EGHWARD SQS + S P AE+GRSQSS
Subjt: KTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRT--GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSH-
Query: GTCFKCGKPGHWARDCSN
G+CFKCG PGHWARDCSN
Subjt: GTCFKCGKPGHWARDCSN
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| A0A2P5AI83 DNA topoisomerase, type IA | 9.0e-97 | 55.43 | Show/hide |
Query: MKFEAKRNF-DFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFT--S
MK E K++F + + E+ +DEDFLS VAAAEA ALASKRR+I + + + + S ++D +G+Y+AALKGN + + TA+ +G
Subjt: MKFEAKRNF-DFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFT--S
Query: ANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSF--NASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNV
+ A + GG SCFKCGK GHWARDCD GGGG N G D S+ EK+CPCGLG+C VLTANTE+NRGRKFYKCP+RQENGGCGFFEWCDN S N
Subjt: ANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSF--NASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNV
Query: MSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQ-ATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGG
M+ GS S+SS+ LQCPCGAG C+ILTAK+G NVGQQFYRCP+ Q ++CGFF+WC E +++ ++++KV N +DT+ S + VRTGSSC+KCG
Subjt: MSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQ-ATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGG
Query: EGHWARDCSQSHTPSNPPSAEFG--RSQSSHGTCFKCGKPGHWARDCSNC
EGHWARDCS PS+ P+AE G +S GTC+KCGKPGHW+RDC+ C
Subjt: EGHWARDCSQSHTPSNPPSAEFG--RSQSSHGTCFKCGKPGHWARDCSNC
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| A0A6J1C4N6 DNA-binding protein HEXBP-like | 2.2e-156 | 76.58 | Show/hide |
Query: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANS-------GNK
MK EAKRNF+F+ EDD+DEDFLS VAAAEARALASKRR+IPNH+IDPPK I E + EGLY+AAL+G PN+ SQISG TANS N+
Subjt: MKFEAKRNFDFEFEDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANS-------GNK
Query: GFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASAT
GF SAN TAQSEGGGSCFKCGKLGHWARDCDAPGGGGSF +G TD SVAEKACPCGLGVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCD+AS T
Subjt: GFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASAT
Query: NVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGT-----------
NVM+YGSQNRASSS FSDL CPCGAG CIILTAKTGENVGQQFYRCPSYQ +CGFFQWCKEP MATKNQ++ K+YGN NDTSKS A T
Subjt: NVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGT-----------
Query: ---VRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
VRTGSSCYKCGGEGHWARDCSQSHT SNPP AE GR+ S+ GTCFKC KPGHWARDC NC
Subjt: ---VRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
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| A0A6J1EZ11 cold shock domain-containing protein 3-like | 1.8e-161 | 81.74 | Show/hide |
Query: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
MKFEAKRNFDF+ +DD+DEDFLSEVAAAEARALASKRRKIPNH+IDPPK I EV+ K S N+D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN
Subjt: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
Query: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
+T AQSEGGGSCFKCGKLGHWARDCDAPG GGSF+ SGN DTSVAEK+CPCG+GVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATN+M+
Subjt: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
Query: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYRCPSYQATCGFFQWCKE SMA KNQ+S +KVYGNT DTSK + T R GSSCYKCGGEGH
Subjt: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
Query: WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
WARDCSQS PSN SS G+CFKCGKPGHWARDCSNC
Subjt: WARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSNC
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| A0A6J1JBZ0 cold shock domain-containing protein 3-like | 4.8e-167 | 83.82 | Show/hide |
Query: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
MKFEAKRNFDF+ +DD+DEDFLSEVAAAEARALASKRRKIPNH+I+PPK I EV++K S N D EG+YIAALKG+P +LSQ+SGR ANSGNKGF SAN
Subjt: MKFEAKRNFDFEF-EDDNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSAN
Query: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
+T AQS+GGGSCFKCGKLGHWARDCDAPG GGSF+AS N DTSVAEK+CPCG GVC VLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATN+M+
Subjt: ST--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMS
Query: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
YGSQNRASSSSFSDL+CPCGAG CI LTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMA KNQ+SA+KVYGNT DTSK + T R GSSCYKCGGEGH
Subjt: YGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGH
Query: WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
WARDCSQS PSNPP AEFGR+QSS G+CFKCGKPGHWARDCSNC
Subjt: WARDCSQSHTPSNPPSAEFGRSQSSH-GTCFKCGKPGHWARDCSNC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O65639 Cold shock protein 1 | 7.5e-08 | 26.2 | Show/hide |
Query: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGL
VS+ + + G+ + A +G+ ++ G+ K S + A+ GGGS C+ CG+LGH ++DC GGGG
Subjt: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGL
Query: GVCFVLTANTERNRGRK-FYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQ
R+RG + Y C G G F D SA N R ++ +D CG +VG C G
Subjt: GVCFVLTANTERNRGRK-FYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQ
Query: WCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRTG----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK
+ A K G+ T K AG VR+G +CY CGG GH ARDC+ PS S R G+ C+K
Subjt: WCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRTG----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK
Query: CGKPGHWARDCSN
CGK GH+AR+CS+
Subjt: CGKPGHWARDCSN
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| P27484 Glycine-rich protein 2 | 6.3e-07 | 46.43 | Show/hide |
Query: GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
GS C+KCG GH+ARDCSQS G G C+KCG+ GH+AR+C++
Subjt: GSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| Q04832 DNA-binding protein HEXBP | 1.7e-07 | 25.42 | Show/hide |
Query: QSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQN
++E SC CGK GH+AR+C D+ E++ C E + R +CP +G G C MS N
Subjt: QSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQN
Query: RASSSSFSDLQC-PCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARD
A + +C CG G CPS +Q + YG S G +CYKCG GH +RD
Subjt: RASSSSFSDLQC-PCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARD
Query: CSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
C P+ + G S + TC+KCG GH +RDC N
Subjt: CSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| Q94C69 Cold shock domain-containing protein 3 | 1.8e-09 | 28.38 | Show/hide |
Query: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVC
VSD F + GE + G+ I TA G NS+ S GG+CF CG++GH A+DCD GG SF G + + CG
Subjt: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVC
Query: FVLTANTE--------RNRGRKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQAT
F GR Y C G G + C S N YG S C G NVG C T
Subjt: FVLTANTE--------RNRGRKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQAT
Query: CGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
CG + TSK +G G +CY+CGG GH ARDC + + S+ G S+ CF CGK GH+AR+C++
Subjt: CGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| Q9NG98 DNA topoisomerase 3-alpha | 1.4e-06 | 24.87 | Show/hide |
Query: NRGRKFYKCPVRQENGGCGFFEWCDN--ASATNVMSYGS--------------------------------------------------QNRASSSSFSD
N GR +YKCP E C FF+W D +SA + S GS +N A+ +
Subjt: NRGRKFYKCPVRQENGGCGFFEWCDN--ASATNVMSYGS--------------------------------------------------QNRASSSSFSD
Query: LQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYG--NTNDTSKSIAGTVRTGS----SCYKCGGEGHWARDC
+ C CG + K G N G+ FY CP+ + +CGFF+W E +NQ +++ +G N N +S + + C C EGH C
Subjt: LQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYG--NTNDTSKSIAGTVRTGS----SCYKCGGEGHWARDC
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G17870.1 cold shock domain protein 3 | 1.3e-10 | 28.38 | Show/hide |
Query: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVC
VSD F + GE + G+ I TA G NS+ S GG+CF CG++GH A+DCD GG SF G + + CG
Subjt: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVC
Query: FVLTANTE--------RNRGRKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQAT
F GR Y C G G + C S N YG S C G NVG C T
Subjt: FVLTANTE--------RNRGRKFYKCPVRQENGGCGFF-EWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQAT
Query: CGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
CG + TSK +G G +CY+CGG GH ARDC + + S+ G S+ CF CGK GH+AR+C++
Subjt: CGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| AT3G42860.1 zinc knuckle (CCHC-type) family protein | 8.4e-63 | 42.38 | Show/hide |
Query: DNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGK
D ++DFL ++AA EA A A + R ++S EG Y+AALKG+ + Q N +K + S A + GG
Subjt: DNDEDFLSEVAAAEARALASKRRKIPNHSIDPPKNVITEVSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGNKGFTSANSTAQSEGGGSCFKCGK
Query: LGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASATNVMSYGSQNRASSSSFSDLQ
+ GGGG +G D EK+CPCG+G+C +LT+NT +N GRKFYKCP R+ENGGCGFF+WCD +S T+ + S + + F D Q
Subjt: LGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCD--NASATNVMSYGSQNRASSSSFSDLQ
Query: CPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCS-QSHTPSNPP
CPCGAG C +LTAKTGENVG+QFYRCP ++ +CGFF+WC + +++ S K N D+ +TG+ CYKCG EGHWARDC+ QS T
Subjt: CPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQMSANKVYGNTNDTSKSIAGTVRTGSSCYKCGGEGHWARDCS-QSHTPSNPP
Query: SAEFGRSQSSHGTCFKCGKPGHWARDCS
+S S+ G CFKCGKPGHW+RDC+
Subjt: SAEFGRSQSSHGTCFKCGKPGHWARDCS
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| AT3G43590.1 zinc knuckle (CCHC-type) family protein | 2.5e-06 | 22.58 | Show/hide |
Query: GGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLG-VCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRA
G SC+ CG+ GH + +C P S+ A C G C++ + G + CP + +NG G C +
Subjt: GGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLG-VCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRA
Query: SSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATC-----GFFQW---CKEPSMATKNQMSANKVYGNTNDTSKSIAGTV---RTGSSCYKCG
S D+QC Y C S+ C W C + ++ + Y +N+ + + R S CY+CG
Subjt: SSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATC-----GFFQW---CKEPSMATKNQMSANKVYGNTNDTSKSIAGTV---RTGSSCYKCG
Query: GEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
EGH+AR+C N S + S C++C GH+AR+C N
Subjt: GEGHWARDCSQSHTPSNPPSAEFGRSQSSHGTCFKCGKPGHWARDCSN
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| AT4G36020.1 cold shock domain protein 1 | 5.3e-09 | 26.2 | Show/hide |
Query: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGL
VS+ + + G+ + A +G+ ++ G+ K S + A+ GGGS C+ CG+LGH ++DC GGGG
Subjt: VSDKFSLNSDGEGLYIAALKGNPNVLSQISGRTANSGN--KGFTSANSTAQSEGGGS-CFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGL
Query: GVCFVLTANTERNRGRK-FYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQ
R+RG + Y C G G F D SA N R ++ +D CG +VG C G
Subjt: GVCFVLTANTERNRGRK-FYKCPVRQENGGCGFFEWCDNASATNVMSYGSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQATCGFFQ
Query: WCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRTG----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK
+ A K G+ T K AG VR+G +CY CGG GH ARDC+ PS S R G+ C+K
Subjt: WCKEPSMATKNQMSANKVYGNTND-----TSKSIAGTVRTG----SSCYKCGGEGHWARDCSQSHTPSN-----PPSAEFGRSQSSHGT--------CFK
Query: CGKPGHWARDCSN
CGK GH+AR+CS+
Subjt: CGKPGHWARDCSN
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| AT5G13920.1 GRF zinc finger / Zinc knuckle protein | 1.3e-18 | 34.84 | Show/hide |
Query: NSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
N T Q+ G CF+C + GHW DC TD CPCG G C + ANT N GRKFYKCP Q C FF+WCD + ++
Subjt: NSTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFNASGNTDTSVAEKACPCGLGVCFVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNVMSY
Query: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQ--ATCGFFQW
+F+ C CGAGPC + + G+ + C + CGFF+W
Subjt: GSQNRASSSSFSDLQCPCGAGPCIILTAKTGENVGQQFYRCPSYQ--ATCGFFQW
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