; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004320 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004320
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold5:18109087..18112398
RNA-Seq ExpressionSpg004320
SyntenySpg004320
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]9.9e-4936.97Show/hide
Query:  EQLGNKEDQLCRDPKKRKEAAEEEVGDSESV----------TSRRPNL----KDDWTHREPEPSHKKV----RRSSP---------SRP---------KQ
        E   + E  L RDPKK K   E +  +S +           T +R  +    K    H+ P P+  K     R S P          RP         K+
Subjt:  EQLGNKEDQLCRDPKKRKEAAEEEVGDSESV----------TSRRPNL----KDDWTHREPEPSHKKV----RRSSP---------SRP---------KQ

Query:  CNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFAT
           D+EELL++ D PFT+++M  +VP KFK+PT  Q+D   DPV HL AY   MD +G  E  RCR F+ TL G AR WF ++ R SI SFK LA AF T
Subjt:  CNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFAT

Query:  QFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPS-LQDEKLLNSIGESQQRTYMEFMTRAQRY
        QF+G + R +    LLT+KQ   ESL+DY+ RF+ E LQ             G    +      S L   S ++DE L  S G+    T+ E ++RAQRY
Subjt:  QFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPS-LQDEKLLNSIGESQQRTYMEFMTRAQRY

Query:  ISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDP
        +S  E   SK+E          D +R D      GD+   +R E    R RS  K+         KFEKYTP +VP+EQVL  +++  LLK   +MK+  
Subjt:  ISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDP

Query:  DRRDKNKYCMYHGDHGHTTREC
         +R K +YC++H DHGH T++C
Subjt:  DRRDKNKYCMYHGDHGHTTREC

XP_030930730.1 uncharacterized protein LOC115956518 [Quercus lobata]1.5e-4131.81Show/hide
Query:  NKEDQLCRDPKKRKEAAEE------EVGDS-ESVTSRR-PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFK
        N+  Q C + +   +A E       E+G    S TSR  P+LK+  D   +  E   + +RR++P         IE+L+   D PFT  + G  +P KFK
Subjt:  NKEDQLCRDPKKRKEAAEE------EVGDS-ESVTSRR-PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFK

Query:  IPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYI
        +P+   YDG +DP  H+  + T M F G  ++  CRAF  TL G AR WF KIP   + SF+EL+  F   F+  +  ++S  +LLT++QG  ESL+ +I
Subjt:  IPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYI

Query:  TRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSG
        TRF+ E L          ++    + ++ +        H  +  +  ++ + E + +T  E +  AQ +++ ++ + +K+  R          R E    
Subjt:  TRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSG

Query:  RHRGDEISRNRQEHTSGRGRSETKEVRNRPEL--KGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC
        RH       + Q     +GR+E K+ R+  ++   G+ + YTPL+ PL+QVL  +++   LK   KMK DP++R+KNKYC +H DHGH   EC
Subjt:  RHRGDEISRNRQEHTSGRGRSETKEVRNRPEL--KGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC

XP_030932814.1 uncharacterized protein LOC115958537 [Quercus lobata]2.0e-4133.04Show/hide
Query:  KKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKS
        KKV        ++ N  +E+L+   D PFT  + G  +P KFK+P+   YDG +DP  H+  + T M   G  ++  CRAF  TL G AR WF KIP  S
Subjt:  KKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKS

Query:  IGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQR
        + SF+EL+  F   F+G +  + S  +LLT++QG  ESL+ +ITRF+ E L          ++    + ++ +        H  +  +  ++ + E + +
Subjt:  IGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQR

Query:  TYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPEL--KGKFEKYTPLSVPLEQVLAAVQN
        T  E +   Q  ++ E+ + +K+  R          R E    RH       + Q     +GR+E K+ R+  +    G+ + YTPL+ PL+QVL  +++
Subjt:  TYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPEL--KGKFEKYTPLSVPLEQVLAAVQN

Query:  TDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC
           LK   KMK DP++R+KNKYC +H DHGH T EC
Subjt:  TDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC

XP_030968695.1 uncharacterized protein LOC115989173 [Quercus lobata]4.0e-4232.34Show/hide
Query:  EVGDSESVTSRR--PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMD
        E+G     T+ R  P+LK+  D   +  E   + +RR++P         IE+L+   D PFT  + G  +P KFK+P+   YDG +DP  H+  + T M 
Subjt:  EVGDSESVTSRR--PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMD

Query:  FHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQE
          G  ++  CRAF  TL G AR WF KIP  S+ SF+EL+  F   F+G +  ++S  +LLT++QG  ESL+ +ITRF+ E L          ++    +
Subjt:  FHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQE

Query:  SIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKE
         ++ +        H  +  +  ++ + E + +T  E +  AQ +++ E+ + +K+  R          R E    RH       + Q     +GR+E ++
Subjt:  SIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKE

Query:  VRN--RPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC
         R+  +    G+ + YTPL+ PL QVL  +++   LK   KMK DP++R+KNKYC +H DHGH   EC
Subjt:  VRN--RPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTREC

XP_030969721.1 uncharacterized protein LOC115989997 [Quercus lobata]2.6e-4129.95Show/hide
Query:  QLGNKEDQLCRDPKKRKEAAEEEVGDSE---------------SVTSRR-PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDD
        +L  +  +L  +  +R++  EE  G ++                 TSR  P+LK+  D   +  E   + +RR++P         IE+L+   D PFT  
Subjt:  QLGNKEDQLCRDPKKRKEAAEEEVGDSE---------------SVTSRR-PNLKD--DWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDD

Query:  VMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVK
        + G  +P KFK+P+   YDG +DP  H+  +   M   G  ++  CRAF  TL G AR WF KIP  S+ SF+EL+  F   F+G +  ++S  +LLT++
Subjt:  VMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVK

Query:  QGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVL
        QG  ESL+ +ITRF+ E L          ++    + ++ +        H  +  +  ++ + E + +T  E +   Q +++ E+ + +K+         
Subjt:  QGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVL

Query:  VSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRN--RPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHT
           R+R ++   H    +  + Q     +GR+E ++ R+  +    G+ + YTPL+ PL QVL  +++   LK   KMK DP++R+KNKYC +H DHGH 
Subjt:  VSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRN--RPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHT

Query:  TREC
        T EC
Subjt:  TREC

TrEMBL top hitse value%identityAlignment
A0A6J1DWY0 uncharacterized protein LOC1110252934.8e-4936.97Show/hide
Query:  EQLGNKEDQLCRDPKKRKEAAEEEVGDSESV----------TSRRPNL----KDDWTHREPEPSHKKV----RRSSP---------SRP---------KQ
        E   + E  L RDPKK K   E +  +S +           T +R  +    K    H+ P P+  K     R S P          RP         K+
Subjt:  EQLGNKEDQLCRDPKKRKEAAEEEVGDSESV----------TSRRPNL----KDDWTHREPEPSHKKV----RRSSP---------SRP---------KQ

Query:  CNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFAT
           D+EELL++ D PFT+++M  +VP KFK+PT  Q+D   DPV HL AY   MD +G  E  RCR F+ TL G AR WF ++ R SI SFK LA AF T
Subjt:  CNEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFAT

Query:  QFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPS-LQDEKLLNSIGESQQRTYMEFMTRAQRY
        QF+G + R +    LLT+KQ   ESL+DY+ RF+ E LQ             G    +      S L   S ++DE L  S G+    T+ E ++RAQRY
Subjt:  QFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPS-LQDEKLLNSIGESQQRTYMEFMTRAQRY

Query:  ISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDP
        +S  E   SK+E          D +R D      GD+   +R E    R RS  K+         KFEKYTP +VP+EQVL  +++  LLK   +MK+  
Subjt:  ISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDP

Query:  DRRDKNKYCMYHGDHGHTTREC
         +R K +YC++H DHGH T++C
Subjt:  DRRDKNKYCMYHGDHGHTTREC

A0A7N2LNH8 Ribonuclease H9.7e-4234.38Show/hide
Query:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ
        + D+++L+   D PFT  V    +P KF++P+   YDG KDP+ HL+ + TLM   G  +   CRAF  TL G AR WF +I   SI +FKEL+  F T 
Subjt:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ

Query:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS
        F+G    +KS   L+ +KQ   E+L+ YI+RF+ E L          +I    + I+ +           L+  K L S+ ++  +T  E + RA +Y++
Subjt:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS

Query:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR
         E+ L S                RED+  +    E SR  Q    GR     ++ R +P + G+F  +TPL+ P++QVL  +++   L   GK+KSDP +
Subjt:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR

Query:  RDKNKYCMYHGDHGHTTREC
        R ++KYC +H DHGH T +C
Subjt:  RDKNKYCMYHGDHGHTTREC

A0A7N2MG20 Ribonuclease H9.7e-4234.38Show/hide
Query:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ
        + D+++L+   D PFT  V    +P KF++P+   YDG KDP+ HL+ + TLM   G  +   CRAF  TL G AR WF +I   SI +FKEL+  F T 
Subjt:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ

Query:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS
        F+G    +KS   L+ +KQ   E+L+ YI+RF+ E L          +I    + I+ +           L+  K L S+ ++  +T  E + RA +Y++
Subjt:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS

Query:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR
         E+ L S                RED+  +    E SR  Q    GR     ++ R +P + G+F  +TPL+ P++QVL  +++   L   GK+KSDP +
Subjt:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR

Query:  RDKNKYCMYHGDHGHTTREC
        R ++KYC +H DHGH T +C
Subjt:  RDKNKYCMYHGDHGHTTREC

A0A7N2N013 Ribonuclease H5.7e-4234.38Show/hide
Query:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ
        + D+++L+   D PFT  V    +P KF++P+   YDG KDP+ HL+ + TLM   G  +   CRAF  TL G AR WF +I   SI +FKEL+  F T 
Subjt:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ

Query:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS
        F+G    +KS   L+ +KQ   E+L+ YI+RF+ E L          +I    + I+ +           L+  K L S+ ++  +T  E + RA +Y++
Subjt:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS

Query:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR
         E+ L S                RED+  +    E SR  Q    GR     ++ R +P + G+F  +TPL+ P++QVL  +++   L   GK+KSDP +
Subjt:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR

Query:  RDKNKYCMYHGDHGHTTREC
        R ++KYC +H DHGH T +C
Subjt:  RDKNKYCMYHGDHGHTTREC

A0A7N2N9G0 Reverse transcriptase6.3e-4133.44Show/hide
Query:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ
        + D+++L+   D PFT  V    +P KF++P    YDG KDP+ HL+ + TLM   G  +   CRAF  TL G AR WF ++   SIG+FKEL+  F   
Subjt:  NEDIEELLEEMDPPFTDDVMGVEVPQKFKIPTF-QYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQ

Query:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS
        F+G    +KS   L+++KQ   E+L+ YI+RF+ E L          ++    + I+ +           L+  K L S+ ++  +T  E + RA +Y++
Subjt:  FLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYIS

Query:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR
         E+ L +                RE+K  +    E +R  Q     R     +E R RP + G+F  +TPL+ P++QVL  +++ + L   GK+KSDP++
Subjt:  VEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRGRSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDR

Query:  RDKNKYCMYHGDHGHTTREC
        R ++KYC +H DHGH T +C
Subjt:  RDKNKYCMYHGDHGHTTREC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATATGGGGCAAAATCTGACGAAGATTTTGAGTTTATTGAAGAAACCCGAGCAGCTAGGGAACAAGGAAGACCAGCTGTGCAGGGACCCTAAGAAGAGGAAAGA
GGCAGCAGAGGAGGAGGTCGGGGATTCAGAGAGCGTTACGAGCAGAAGGCCGAACCTAAAAGATGACTGGACTCACAGAGAACCCGAACCTAGTCACAAAAAGGTCCGCA
GAAGCTCGCCGTCAAGGCCAAAGCAATGTAATGAGGATATAGAGGAGCTGCTAGAGGAGATGGATCCGCCCTTCACAGATGACGTTATGGGGGTTGAAGTGCCACAGAAG
TTCAAAATACCCACCTTCCAGTATGACGGAAAGAAAGATCCGGTCCAACACCTGAAGGCGTACCTCACCTTGATGGATTTTCATGGGGCCGACGAAGATACTAGATGTCG
AGCCTTTGCACTTACCTTGACCGGCTTGGCAAGGCAATGGTTTGGCAAGATACCCCGAAAATCCATAGGGTCGTTCAAAGAGCTGGCACTGGCCTTCGCCACGCAGTTTT
TAGGGGCCAAAAACCGACGTAAGTCGCATATCAATTTGTTGACAGTCAAACAAGGGCCAAGAGAAAGCTTGAAGGATTACATCACGAGATTCAGTAATGAAGTCCTGCAG
GCCACTCTCACCCGTACAAATCAAAGGACAATCCCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGTCATCCTAGTTTGCAAGACGAAAA
ACTGCTCAACTCCATAGGAGAAAGCCAGCAGCGAACATATATGGAATTCATGACTCGAGCACAGCGATATATCAGTGTTGAGGAGTTGTTGAGGTCCAAGCAAGAAGATA
GGGAAAGTTGGGGGGTATTAGTCTCCGACAGACGAAGGGAAGACAAAAGCGGGAGGCACCGAGGAGATGAAATTAGTCGGAACAGGCAAGAGCATACCTCGGGCCGAGGC
CGATCAGAAACAAAGGAGGTCCGAAACCGACCAGAACTGAAAGGCAAGTTTGAAAAATATACCCCACTGTCGGTCCCTCTCGAACAGGTTCTCGCAGCTGTCCAGAATAC
AGATTTGCTGAAGCGGGCAGGAAAGATGAAGTCAGATCCAGACAGGAGAGACAAGAACAAATACTGCATGTACCATGGGGACCACGGTCACACAACGCGGGAATGCATAT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATATGGGGCAAAATCTGACGAAGATTTTGAGTTTATTGAAGAAACCCGAGCAGCTAGGGAACAAGGAAGACCAGCTGTGCAGGGACCCTAAGAAGAGGAAAGA
GGCAGCAGAGGAGGAGGTCGGGGATTCAGAGAGCGTTACGAGCAGAAGGCCGAACCTAAAAGATGACTGGACTCACAGAGAACCCGAACCTAGTCACAAAAAGGTCCGCA
GAAGCTCGCCGTCAAGGCCAAAGCAATGTAATGAGGATATAGAGGAGCTGCTAGAGGAGATGGATCCGCCCTTCACAGATGACGTTATGGGGGTTGAAGTGCCACAGAAG
TTCAAAATACCCACCTTCCAGTATGACGGAAAGAAAGATCCGGTCCAACACCTGAAGGCGTACCTCACCTTGATGGATTTTCATGGGGCCGACGAAGATACTAGATGTCG
AGCCTTTGCACTTACCTTGACCGGCTTGGCAAGGCAATGGTTTGGCAAGATACCCCGAAAATCCATAGGGTCGTTCAAAGAGCTGGCACTGGCCTTCGCCACGCAGTTTT
TAGGGGCCAAAAACCGACGTAAGTCGCATATCAATTTGTTGACAGTCAAACAAGGGCCAAGAGAAAGCTTGAAGGATTACATCACGAGATTCAGTAATGAAGTCCTGCAG
GCCACTCTCACCCGTACAAATCAAAGGACAATCCCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGTCATCCTAGTTTGCAAGACGAAAA
ACTGCTCAACTCCATAGGAGAAAGCCAGCAGCGAACATATATGGAATTCATGACTCGAGCACAGCGATATATCAGTGTTGAGGAGTTGTTGAGGTCCAAGCAAGAAGATA
GGGAAAGTTGGGGGGTATTAGTCTCCGACAGACGAAGGGAAGACAAAAGCGGGAGGCACCGAGGAGATGAAATTAGTCGGAACAGGCAAGAGCATACCTCGGGCCGAGGC
CGATCAGAAACAAAGGAGGTCCGAAACCGACCAGAACTGAAAGGCAAGTTTGAAAAATATACCCCACTGTCGGTCCCTCTCGAACAGGTTCTCGCAGCTGTCCAGAATAC
AGATTTGCTGAAGCGGGCAGGAAAGATGAAGTCAGATCCAGACAGGAGAGACAAGAACAAATACTGCATGTACCATGGGGACCACGGTCACACAACGCGGGAATGCATAT
AG
Protein sequenceShow/hide protein sequence
MDDMGQNLTKILSLLKKPEQLGNKEDQLCRDPKKRKEAAEEEVGDSESVTSRRPNLKDDWTHREPEPSHKKVRRSSPSRPKQCNEDIEELLEEMDPPFTDDVMGVEVPQK
FKIPTFQYDGKKDPVQHLKAYLTLMDFHGADEDTRCRAFALTLTGLARQWFGKIPRKSIGSFKELALAFATQFLGAKNRRKSHINLLTVKQGPRESLKDYITRFSNEVLQ
ATLTRTNQRTIPHGQESIIHSGLRPSCLGHPSLQDEKLLNSIGESQQRTYMEFMTRAQRYISVEELLRSKQEDRESWGVLVSDRRREDKSGRHRGDEISRNRQEHTSGRG
RSETKEVRNRPELKGKFEKYTPLSVPLEQVLAAVQNTDLLKRAGKMKSDPDRRDKNKYCMYHGDHGHTTRECI