| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 1.2e-106 | 75.44 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPNRVELG+CLSSYIDNG+TESHRYFL RRTVLEMLRDRGY+ SD DL+LQQFREIYGQSPDVDRLKLSAVH SDPSKRILVIFCGTG+V
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAV+LFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQVVKV+YDGDMT SHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| XP_022950955.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita moschata] | 2.3e-105 | 74.02 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGY++NPSDIDL+LQQFREIYGQ DVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQ+VKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| XP_022971518.1 DNA-directed RNA polymerase V subunit 5A isoform X2 [Cucurbita maxima] | 1.4e-105 | 74.02 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGY++NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYY LEKGQ+VKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 2.1e-106 | 74.38 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGY++NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQ+VKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 3.3e-107 | 75.09 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGY++N SDIDLSLQQFREIYGQSPDVDRLKLSAVH SDPSKR+LVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVL+EEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLR DA+ARYYGLEKGQVVKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 1.4e-103 | 71.89 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYID+GTTESHRYFLSRRTV+EML+DRGY++N +ID SLQQFRE +GQ PDVDRLKLSA H SDPSKR+LV+FCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQVVKV+YDGDMTR+H+TYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 1.4e-103 | 72.24 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPN VE G+CLSSYID+GTTESHRYFLSRRTV+EML+DRGY++N DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR+LV+FCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KVNAIRNIAGQI NKD+LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQVVKV+YDGDMT +HVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 6.0e-107 | 75.44 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGFE EPNRVELG+CLSSYIDNG+TESHRYFL RRTVLEMLRDRGY+ SD DL+LQQFREIYGQSPDVDRLKLSAVH SDPSKRILVIFCGTG+V
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAV+LFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQVVKV+YDGDMT SHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| A0A6J1GH86 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.1e-105 | 74.02 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGY++NPSDIDL+LQQFREIYGQ DVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYYGLEKGQ+VKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 6.6e-106 | 74.02 | Show/hide |
Query: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
MEEDGF EPNRVELG+CLSSYID+GTTESHRY+LSRRTVLEMLRDRGY++NPSDIDL+LQQFREIYGQ PDVDRLKLSA H +DPSKRILVIFCGTGAV
Subjt: MEEDGFEEEPNRVELGSCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAV
Query: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
KV+AIRNIAGQIVNK+TLHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQ
Subjt: KVNAIRNIAGQIVNKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIIC
Query: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPRMLRTDAIARYY LEKGQ+VKV+YDGDMTRSHVTYRCVW
Subjt: CGVVILLAQSGTSLLDCRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.8e-21 | 27.03 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDR-----LKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLIL
E++R + R+TVL+M+ DRGY V ++D L+ F+E +G P + L + H DP+ ++ V F + + I+ I Q + + + I+
Subjt: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDR-----LKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLIL
Query: IVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLAL
+VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ Q
Subjt: IVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLAL
Query: LQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
LPR+ + D +ARY+GL +GQVVK+ + ++TYR V
Subjt: LQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 9.8e-22 | 28.74 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY + S++ ++ QQF +G + + L +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDD
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E Q
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDD
Query: QGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
LPR+ TD IARY+GL++GQVVK+ + +VTYR V
Subjt: QGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 1.8e-44 | 36.36 | Show/hide |
Query: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
+C+S D G ES R++L+R T EMLRDRGY VN +++ L+L +FR ++G+ P+++RL++ SDP K+ILV+F GT + V ++R + QI N
Subjt: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
Query: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLD
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLPY+ +
Subjt: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLD
Query: CRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
D+ RYYGL+K QVVK++Y + VTYRC+
Subjt: CRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 3.9e-71 | 51.89 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY V+ DI+LSL FR +YG+ PDVDRL++SA+H SD +K++ ++F GT VKVNAIR++ I++++T
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDC
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDC
Query: RLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPR+ + DAI RYYGLEKGQVVKV+Y G++T SHV +RCVW
Subjt: RLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 7.9e-64 | 49.22 | Show/hide |
Query: IDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
I + E H+Y+L+RRT +EMLRDRGY V+ DI+LSLQQFR +YG+ PDVD L++SA H D SK+I V+FCGTG VKVNA+R IA +++++ + GLI
Subjt: IDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALL
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALL
Query: QGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
LPR+ D I RYYGLE GQV+KV+Y +++ SHVTYRCV
Subjt: QGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 5.6e-65 | 49.22 | Show/hide |
Query: IDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
I + E H+Y+L+RRT +EMLRDRGY V+ DI+LSLQQFR +YG+ PDVD L++SA H D SK+I V+FCGTG VKVNA+R IA +++++ + GLI
Subjt: IDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALL
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQ
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALL
Query: QGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
LPR+ D I RYYGLE GQV+KV+Y +++ SHVTYRCV
Subjt: QGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.9e-23 | 28.74 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY + S++ ++ QQF +G + + L +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDD
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E Q
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQGDD
Query: QGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
LPR+ TD IARY+GL++GQVVK+ + +VTYR V
Subjt: QGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.3e-45 | 36.36 | Show/hide |
Query: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
+C+S D G ES R++L+R T EMLRDRGY VN +++ L+L +FR ++G+ P+++RL++ SDP K+ILV+F GT + V ++R + QI N
Subjt: SCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKD
Query: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLD
LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLPY+ +
Subjt: TLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLD
Query: CRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
D+ RYYGL+K QVVK++Y + VTYRC+
Subjt: CRLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.8e-72 | 51.89 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY V+ DI+LSL FR +YG+ PDVDRL++SA+H SD +K++ ++F GT VKVNAIR++ I++++T
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQSPDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDC
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQ
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDC
Query: RLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
LPR+ + DAI RYYGLEKGQVVKV+Y G++T SHV +RCVW
Subjt: RLALLQGDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYRCVW
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 4.2e-20 | 28.63 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQS---PDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIV
E R F RRTVL+MLRDRGY++ SD++L ++F + + ++ + + L +SA +P+ +I V + V V I+ + D +H I++V
Subjt: ESHRYFLSRRTVLEMLRDRGYSVNPSDIDLSLQQFREIYGQS---PDVDRLKLSAVHTSDPSKRILVIFCGTGAVKVNAIRNIAGQIVNKDTLHGLILIV
Query: QNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQ
IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ Q
Subjt: QNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPYVLRRGKILIICCGVVILLAQSGTSLLDCRLALLQ
Query: GDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYR
LPR+L TD +ARYYGL++GQVVK+ + + TYR
Subjt: GDDQGVPPLSAVSGEGKLPRMLRTDAIARYYGLEKGQVVKVSYDGDMTRSHVTYR
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