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Spg004347 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004347
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCYSTM domain-containing protein
Genome locationscaffold5:17659392..17660822
RNA-Seq ExpressionSpg004347
SyntenySpg004347
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF30889.1 conserved hypothetical protein [Ricinus communis]3.1e-1266.07Show/hide
Query:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        MP SE +++  PPGYPT D    KK+    TKK+GDR FIEGCLFALCCCWLCEAC
Subjt:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

ESR34507.1 hypothetical protein CICLE_v10006402mg [Citrus clementina]1.5e-1165.45Show/hide
Query:  SEARQDHQPPGYPTED--VGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        SE   +  P GYPTE+   G GKK+    TKK+GDR FIEGCLFALCCCWLCEAC
Subjt:  SEARQDHQPPGYPTED--VGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

KAG5055048.1 hypothetical protein JHK85_007558 [Glycine max]3.1e-1267.92Show/hide
Query:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC
        E + +  PPGYPTE+  A K++F+  TKKRGDR FIEGCLFALCCCWLCE CC
Subjt:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC

XP_007028562.2 PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Theobroma cacao]3.1e-1266.07Show/hide
Query:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        MP S+A+++  P GYPT D+ A KK F   TKK+GDR FIEGCLFALCCCWLCE C
Subjt:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

XP_022744616.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Durio zibethinus]6.8e-1260.71Show/hide
Query:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        MP SEA+++ +P GYP+ +  A +K+ +  TKK+GDR FIEGCLFALCCCWLCE C
Subjt:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

TrEMBL top hitse value%identityAlignment
A0A0B2R9Y8 CYSTM domain-containing protein1.5e-1267.92Show/hide
Query:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC
        E + +  PPGYPTE+  A K++F+  TKKRGDR FIEGCLFALCCCWLCE CC
Subjt:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC

A0A6P5YWU3 cysteine-rich and transmembrane domain-containing protein WIH23.3e-1260.71Show/hide
Query:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        MP SEA+++ +P GYP+ +  A +K+ +  TKK+GDR FIEGCLFALCCCWLCE C
Subjt:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

B9SZT3 CYSTM domain-containing protein1.5e-1266.07Show/hide
Query:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        MP SE +++  PPGYPT D    KK+    TKK+GDR FIEGCLFALCCCWLCEAC
Subjt:  MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

I1JN62 CYSTM domain-containing protein1.5e-1267.92Show/hide
Query:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC
        E + +  PPGYPTE+  A K++F+  TKKRGDR FIEGCLFALCCCWLCE CC
Subjt:  EARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC

V4S2H5 CYSTM domain-containing protein7.3e-1265.45Show/hide
Query:  SEARQDHQPPGYPTED--VGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        SE   +  P GYPTE+   G GKK+    TKK+GDR FIEGCLFALCCCWLCEAC
Subjt:  SEARQDHQPPGYPTED--VGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32190.1 unknown protein9.5e-0441.07Show/hide
Query:  PISEARQDHQPP-GYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        P+S       PP GYPT D+        + TK +GD  F++GCL A+CCC + +AC
Subjt:  PISEARQDHQPP-GYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEAC

AT5G04080.1 unknown protein4.7e-1150.79Show/hide
Query:  ISEARQDHQPPGYP-----TEDVGAGKK----RFWDATKKRGDRSFIEGCLFALCCCWLCEAC
        + + R  + P GYP     +E  G  KK    RF++ TK++GDR FIEGCLFALCCCW+CE C
Subjt:  ISEARQDHQPPGYP-----TEDVGAGKK----RFWDATKKRGDRSFIEGCLFALCCCWLCEAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATATCAGAAGCAAGACAAGACCATCAACCACCAGGGTACCCGACCGAGGATGTCGGGGCGGGGAAGAAACGCTTCTGGGACGCTACAAAGAAACGAGGAGACAG
AAGTTTTATTGAAGGATGCCTTTTTGCCTTGTGTTGCTGCTGGCTTTGTGAGGCATGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATATCAGAAGCAAGACAAGACCATCAACCACCAGGGTACCCGACCGAGGATGTCGGGGCGGGGAAGAAACGCTTCTGGGACGCTACAAAGAAACGAGGAGACAG
AAGTTTTATTGAAGGATGCCTTTTTGCCTTGTGTTGCTGCTGGCTTTGTGAGGCATGCTGCTGA
Protein sequenceShow/hide protein sequence
MPISEARQDHQPPGYPTEDVGAGKKRFWDATKKRGDRSFIEGCLFALCCCWLCEACC