; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004350 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004350
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:17762518..17765390
RNA-Seq ExpressionSpg004350
SyntenySpg004350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]5.8e-2160.33Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+RP SSS+ AP P+SADQYAMDLGFT VTR  SR  GI    P ESST PPRPS NL+ PS GVVQ+RPP SPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.8e-2266.67Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+RPSSSS+  P PMSADQYAMDLGFT VTRSRSR   IR   P ESST PP+PS NL+ PSGGVVQ+R PVSPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKR
         AVTP+KR
Subjt:  AAVTPEKR

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.2e-2160.33Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+ PSSSS+ A  PM++DQYAMDL FT VTRSRSR   IR   P ESST PPRP ANL+ PSGGVVQ+RPP SPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]5.8e-2157.85Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+  SSSS+ AP P  ADQYAM++GFT VTRSRSR   IR +  +  ST PPRPS NL+HPS GVVQ+RPP SPSS   SS P S+TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]8.1e-2363.56Show/hide
Query:  RGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYSAAV
        R  ++SSKG+RPSSSS+ AP PMSADQY MDLGFT V RSRSR   IR   P ESST PPRP ANL+ PSG VVQ+RPP SPSS   SS P  +TYS AV
Subjt:  RGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYSAAV

Query:  TPEKRF-PKNSIDGGFRQ
        TP+KRF P+  I   F++
Subjt:  TPEKRF-PKNSIDGGFRQ

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.8e-2160.33Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+RP SSS+ AP P+SADQYAMDLGFT VTR  SR  GI    P ESST PPRPS NL+ PS GVVQ+RPP SPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

A0A5A7U8A0 Uncharacterized protein8.7e-2366.67Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+RPSSSS+  P PMSADQYAMDLGFT VTRSRSR   IR   P ESST PP+PS NL+ PSGGVVQ+R PVSPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKR
         AVTP+KR
Subjt:  AAVTPEKR

A0A5A7URC1 Uncharacterized protein5.6e-2260.33Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+ PSSSS+ A  PM++DQYAMDL FT VTRSRSR   IR   P ESST PPRP ANL+ PSGGVVQ+RPP SPSS   SS P  +TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

A0A5D3BPD3 Uncharacterized protein2.8e-2157.85Show/hide
Query:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS
        +  R  ++SSKG+  SSSS+ AP P  ADQYAM++GFT VTRSRSR   IR +  +  ST PPRPS NL+HPS GVVQ+RPP SPSS   SS P S+TYS
Subjt:  SENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYS

Query:  AAVTPEKRF-PKNSIDGGFRQ
         AVTP+KRF P+  I   F++
Subjt:  AAVTPEKRF-PKNSIDGGFRQ

A0A5D3CKX1 Uncharacterized protein3.9e-2363.56Show/hide
Query:  RGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYSAAV
        R  ++SSKG+RPSSSS+ AP PMSADQY MDLGFT V RSRSR   IR   P ESST PPRP ANL+ PSG VVQ+RPP SPSS   SS P  +TYS AV
Subjt:  RGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYSAAV

Query:  TPEKRF-PKNSIDGGFRQ
        TP+KRF P+  I   F++
Subjt:  TPEKRF-PKNSIDGGFRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAAATAGAGGCAGAGCCTCCTCTTCAAAGGGCAGTCGCCCATCTTCTTCTTCTTCTCCAGCACCTCCTCCTATGAGTGCTGATCAATATGCAATGGATTTGGG
GTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTTGTCCATCCTT
CTGGCGGAGTTGTTCAATTGAGACCTCCTGTCTCTCCTTCTTCAGCAATCGGATCATCGATCCCGACCTCTTCAACATACTCTGCGGCTGTAACGCCTGAAAAGAGATTT
CCAAAGAATTCTATAGATGGCGGCTTCAGACAGAAGCGCATCCCCAGCTTCTTCTGCACAAGAAGGAGAAGAAAGCGATCCGGATTACGATCTGGACGATCCATTCCTCG
ACTCACAACCTATAAGAAGAAGCAGCAGTGCGATCAAGGTCAAAGATCCTATATTTTGAAGACGAAGATAGTTGGCAATTGTCCTGAAGATCGTGAGGACCTAGTTTGGT
GTTCCCGGCCGTCAACCATGAAGATGAGGCCCAAAGGAAATGAAGGGAGGCCCAAAGGAAATGAAGGGAGGCCCAAATTCAAGTCCAAATCCGTAGCTGAAAGTTCTGGA
ATTCACCTAGCGTCGAGACGCTGTACGGACAGCGTCACGAGGCTGATCCCATTTCTTTGCCAGCAAGTCGATGACGTCACAGCGTCGCGACGCTGTGCCAATAGCGTCGC
GATGCTACCCTATTTCCAAGCCTATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAAATAGAGGCAGAGCCTCCTCTTCAAAGGGCAGTCGCCCATCTTCTTCTTCTTCTCCAGCACCTCCTCCTATGAGTGCTGATCAATATGCAATGGATTTGGG
GTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGCGGTATACGCCCTATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTTGTCCATCCTT
CTGGCGGAGTTGTTCAATTGAGACCTCCTGTCTCTCCTTCTTCAGCAATCGGATCATCGATCCCGACCTCTTCAACATACTCTGCGGCTGTAACGCCTGAAAAGAGATTT
CCAAAGAATTCTATAGATGGCGGCTTCAGACAGAAGCGCATCCCCAGCTTCTTCTGCACAAGAAGGAGAAGAAAGCGATCCGGATTACGATCTGGACGATCCATTCCTCG
ACTCACAACCTATAAGAAGAAGCAGCAGTGCGATCAAGGTCAAAGATCCTATATTTTGAAGACGAAGATAGTTGGCAATTGTCCTGAAGATCGTGAGGACCTAGTTTGGT
GTTCCCGGCCGTCAACCATGAAGATGAGGCCCAAAGGAAATGAAGGGAGGCCCAAAGGAAATGAAGGGAGGCCCAAATTCAAGTCCAAATCCGTAGCTGAAAGTTCTGGA
ATTCACCTAGCGTCGAGACGCTGTACGGACAGCGTCACGAGGCTGATCCCATTTCTTTGCCAGCAAGTCGATGACGTCACAGCGTCGCGACGCTGTGCCAATAGCGTCGC
GATGCTACCCTATTTCCAAGCCTATAAATAG
Protein sequenceShow/hide protein sequence
MSENRGRASSSKGSRPSSSSSPAPPPMSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVHPSGGVVQLRPPVSPSSAIGSSIPTSSTYSAAVTPEKRF
PKNSIDGGFRQKRIPSFFCTRRRRKRSGLRSGRSIPRLTTYKKKQQCDQGQRSYILKTKIVGNCPEDREDLVWCSRPSTMKMRPKGNEGRPKGNEGRPKFKSKSVAESSG
IHLASRRCTDSVTRLIPFLCQQVDDVTASRRCANSVAMLPYFQAYK