; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004351 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004351
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold5:18686927..18690270
RNA-Seq ExpressionSpg004351
SyntenySpg004351
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]9.6e-1027.42Show/hide
Query:  LLKQREDKGEGIAEASLEPEDSETEEPRLPYNRFINNLARAKYVELMK-RDFLFER------EFSGDLPHFLRVGITNHGWELFCSKPESVKEHVVCKFY
        +++ +E+  + I +   + E     EPR    +FI+  A AKY + ++ ++F  ER      +  G +P +L   I    WE  C  P S    VV +FY
Subjt:  LLKQREDKGEGIAEASLEPEDSETEEPRLPYNRFINNLARAKYVELMK-RDFLFER------EFSGDLPHFLRVGITNHGWELFCSKPESVKEHVVCKFY

Query:  ANIDEEEGYNEMVV----APSNEQL--------------------------NDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSLSIDV
        AN    E   +++V     P +++L                          +D+V E+    A+W + +     F+ + L++E              ++V
Subjt:  ANIDEEEGYNEMVV----APSNEQL--------------------------NDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSLSIDV

Query:  GKIVANEIFGCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGI
        GK+VA  IF C  +  GKLFFP  IT LC+ AGVP   ED  +  KG+
Subjt:  GKIVANEIFGCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.7e-1126.34Show/hide
Query:  GIAEASLEPEDSETEEPRLPYNRFINNLARAKYVELMKRDFLFEREFSGDLPHFLRVGITNHGWELFCSKPESVKEHVVCKFYANI-DEEEG--------
        GI   + +   +   E      R+ NN+ + + +   K   L   E  G LP   +V IT H W+ FC+ PE     +V +FYAN+ D EE         
Subjt:  GIAEASLEPEDSETEEPRLPYNRFINNLARAKYVELMKRDFLFEREFSGDLPHFLRVGITNHGWELFCSKPESVKEHVVCKFYANI-DEEEG--------

Query:  --------------------YNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL----------------------
                            ++E +   + + L  V+  V    A+W +S     T   + L   A  W  F+K R L                      
Subjt:  --------------------YNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL----------------------

Query:  -SIDVGKIVANEIFGCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARL
         SI+VG+++ +EI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  -SIDVGKIVANEIFGCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.6e-1530.7Show/hide
Query:  IDEEEGYNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL-----------------------SIDVGKIVANEIF
        +DE   + E +  P   +L  V+  V    A+W +S     T   + L   A  W  F+K R L                       SI+VG+++ +EI 
Subjt:  IDEEEGYNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL-----------------------SIDVGKIVANEIF

Query:  GCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARLQR---TQEARQ---------------GGLVCGIHTILERLALSTSRQEFVER
         C  +K G LFFP+ IT LC+ A    NEE   L + G ID   +AR+ +   T+  +Q               G ++  +  + +RL    S+QE   +
Subjt:  GCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARLQR---TQEARQ---------------GGLVCGIHTILERLALSTSRQEFVER

Query:  QSQNFWIYVKCRDANLKKALQENFSKPL
        Q Q FW Y K RD  LKKALQ NF++P+
Subjt:  QSQNFWIYVKCRDANLKKALQENFSKPL

TrEMBL top hitse value%identityAlignment
A0A2P5DXM3 Uncharacterized protein3.7e-1530.7Show/hide
Query:  IDEEEGYNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL-----------------------SIDVGKIVANEIF
        +DE   + E +  P   +L  V+  V    A+W +S     T   + L   A  W  F+K R L                       SI+VG+++ +EI 
Subjt:  IDEEEGYNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSL-----------------------SIDVGKIVANEIF

Query:  GCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARLQR---TQEARQ---------------GGLVCGIHTILERLALSTSRQEFVER
         C  +K G LFFP+ IT LC+ A    NEE   L + G ID   +AR+ +   T+  +Q               G ++  +  + +RL    S+QE   +
Subjt:  GCWWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARLQR---TQEARQ---------------GGLVCGIHTILERLALSTSRQEFVER

Query:  QSQNFWIYVKCRDANLKKALQENFSKPL
        Q Q FW Y K RD  LKKALQ NF++P+
Subjt:  QSQNFWIYVKCRDANLKKALQENFSKPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACGAGAGTAAGAAAAGAGAGGGATAGTGAGGAAGAGGAGGTACCTGTTACCCCCGAAGTACCGAAAACGAAGGCAAAGAAAAAGAAGACACCGGAAGAAAA
AGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGGTAGTAGAGGATGTTGCTGCCGAGGTAGTTGAAGAAGGCAATCTGAAGGAAC
CTGAAGGACAAAACCCAGAGCAGACTGACCCGATAGTTGCGGATACGGAGGAAGTTCAAGAAGAAAATACGGAGGAAGTTCAAGAAAAACAGATTGAGGATGCGCAAGAA
GGACGGACAGAGTTTGCGCTTGAAAAAGGTAATGAACAAGAGTCGAAGGCTCGAGTAGAGGTTATCATGCCGGAAGAGAAAAAAGAGGCCGAAGACAAAGCAAGAGAGGA
AGCAGAGAAAAAGGCTGAGGAAGAAGTTTTGCTCAAACAAAGGGAAGACAAGGGCGAGGGTATTGCTGAAGCATCGCTGGAACCAGAAGATAGCGAAACAGAGGAACCAA
GGTTGCCGTACAATCGCTTTATCAACAATCTTGCCAGAGCAAAGTATGTTGAGCTGATGAAGAGAGACTTCCTGTTTGAGAGAGAATTTAGTGGTGATCTTCCACATTTT
TTGCGGGTCGGCATTACGAACCACGGCTGGGAGTTATTCTGTTCCAAGCCTGAATCTGTGAAAGAGCATGTAGTGTGCAAGTTTTATGCAAATATTGACGAGGAAGAGGG
ATACAATGAGATGGTTGTGGCGCCATCTAATGAGCAATTAAACGATGTTGTTCGGGAAGTTGGTGTTGAAGAGGCGCAGTGGAGACTTTCGAAAACAGAGAAAAGGACAT
TCCAGGCAGCCTATCTAAAGAATGAAGCAAATACATGGATGGGATTCATCAAACAAAGGTCTCTCAGTATTGATGTGGGCAAGATTGTTGCGAATGAAATATTTGGATGC
TGGTGGAAGAAAGTTGGGAAGTTGTTTTTCCCAAATACGATTACAATGCTTTGCAAGCGAGCAGGGGTTCCGGAAAATGAAGAAGATATCATATTATTCGACAAGGGAAT
CATTGATACGCCTAACTTGGCACGGCTTCAGCGCACGCAAGAAGCACGTCAGGGTGGTCTTGTTTGTGGCATTCACACGATTTTAGAACGACTGGCACTGTCGACCAGCA
GGCAAGAGTTTGTTGAGAGGCAATCTCAAAATTTCTGGATCTATGTTAAATGTCGTGATGCCAACCTGAAGAAGGCGCTACAGGAAAATTTTTCCAAACCCTTGGACTGG
TTAAGCTTAATTAGATCAAGAAGAACTATATTGCTGCAGCAGTCCTTGGTTTTGCAGAATGCTCAGGTTAAGGTTGAAGGTAGTGTTGGATTATCTGTTTTGATTGAGTT
CAAAGCAAGGAGCAAAACTGCCACGTCACAACTCGTTATCCATTTTAATGAGCCGAAGTTTGTTGAGCTATTCTCGGATTTAAGAAGCAAGGAGAGCCATCCACGTGTCC
AATTTGACCTAATTAGGGCTTGCTATCACCCTATAAAAGGAGGAGTCGTCTCAAGTCAAATGTATTCCATTCTGGGGAGGGACATTCCACTCTTGGAAAGTTCATTTCCA
TTATTGGGAGCCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACGAGAGTAAGAAAAGAGAGGGATAGTGAGGAAGAGGAGGTACCTGTTACCCCCGAAGTACCGAAAACGAAGGCAAAGAAAAAGAAGACACCGGAAGAAAA
AGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGGTAGTAGAGGATGTTGCTGCCGAGGTAGTTGAAGAAGGCAATCTGAAGGAAC
CTGAAGGACAAAACCCAGAGCAGACTGACCCGATAGTTGCGGATACGGAGGAAGTTCAAGAAGAAAATACGGAGGAAGTTCAAGAAAAACAGATTGAGGATGCGCAAGAA
GGACGGACAGAGTTTGCGCTTGAAAAAGGTAATGAACAAGAGTCGAAGGCTCGAGTAGAGGTTATCATGCCGGAAGAGAAAAAAGAGGCCGAAGACAAAGCAAGAGAGGA
AGCAGAGAAAAAGGCTGAGGAAGAAGTTTTGCTCAAACAAAGGGAAGACAAGGGCGAGGGTATTGCTGAAGCATCGCTGGAACCAGAAGATAGCGAAACAGAGGAACCAA
GGTTGCCGTACAATCGCTTTATCAACAATCTTGCCAGAGCAAAGTATGTTGAGCTGATGAAGAGAGACTTCCTGTTTGAGAGAGAATTTAGTGGTGATCTTCCACATTTT
TTGCGGGTCGGCATTACGAACCACGGCTGGGAGTTATTCTGTTCCAAGCCTGAATCTGTGAAAGAGCATGTAGTGTGCAAGTTTTATGCAAATATTGACGAGGAAGAGGG
ATACAATGAGATGGTTGTGGCGCCATCTAATGAGCAATTAAACGATGTTGTTCGGGAAGTTGGTGTTGAAGAGGCGCAGTGGAGACTTTCGAAAACAGAGAAAAGGACAT
TCCAGGCAGCCTATCTAAAGAATGAAGCAAATACATGGATGGGATTCATCAAACAAAGGTCTCTCAGTATTGATGTGGGCAAGATTGTTGCGAATGAAATATTTGGATGC
TGGTGGAAGAAAGTTGGGAAGTTGTTTTTCCCAAATACGATTACAATGCTTTGCAAGCGAGCAGGGGTTCCGGAAAATGAAGAAGATATCATATTATTCGACAAGGGAAT
CATTGATACGCCTAACTTGGCACGGCTTCAGCGCACGCAAGAAGCACGTCAGGGTGGTCTTGTTTGTGGCATTCACACGATTTTAGAACGACTGGCACTGTCGACCAGCA
GGCAAGAGTTTGTTGAGAGGCAATCTCAAAATTTCTGGATCTATGTTAAATGTCGTGATGCCAACCTGAAGAAGGCGCTACAGGAAAATTTTTCCAAACCCTTGGACTGG
TTAAGCTTAATTAGATCAAGAAGAACTATATTGCTGCAGCAGTCCTTGGTTTTGCAGAATGCTCAGGTTAAGGTTGAAGGTAGTGTTGGATTATCTGTTTTGATTGAGTT
CAAAGCAAGGAGCAAAACTGCCACGTCACAACTCGTTATCCATTTTAATGAGCCGAAGTTTGTTGAGCTATTCTCGGATTTAAGAAGCAAGGAGAGCCATCCACGTGTCC
AATTTGACCTAATTAGGGCTTGCTATCACCCTATAAAAGGAGGAGTCGTCTCAAGTCAAATGTATTCCATTCTGGGGAGGGACATTCCACTCTTGGAAAGTTCATTTCCA
TTATTGGGAGCCGAATAG
Protein sequenceShow/hide protein sequence
MAKTRVRKERDSEEEEVPVTPEVPKTKAKKKKTPEEKEAKRRRRQQRAEDQEIVQKVVEDVAAEVVEEGNLKEPEGQNPEQTDPIVADTEEVQEENTEEVQEKQIEDAQE
GRTEFALEKGNEQESKARVEVIMPEEKKEAEDKAREEAEKKAEEEVLLKQREDKGEGIAEASLEPEDSETEEPRLPYNRFINNLARAKYVELMKRDFLFEREFSGDLPHF
LRVGITNHGWELFCSKPESVKEHVVCKFYANIDEEEGYNEMVVAPSNEQLNDVVREVGVEEAQWRLSKTEKRTFQAAYLKNEANTWMGFIKQRSLSIDVGKIVANEIFGC
WWKKVGKLFFPNTITMLCKRAGVPENEEDIILFDKGIIDTPNLARLQRTQEARQGGLVCGIHTILERLALSTSRQEFVERQSQNFWIYVKCRDANLKKALQENFSKPLDW
LSLIRSRRTILLQQSLVLQNAQVKVEGSVGLSVLIEFKARSKTATSQLVIHFNEPKFVELFSDLRSKESHPRVQFDLIRACYHPIKGGVVSSQMYSILGRDIPLLESSFP
LLGAE