CuGenDBv2

Gene ID	Spg004382
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cytochrome c oxidase subunit 3
Genome location	scaffold86:38190..41093
RNA-Seq Expression	Spg004382
Synteny	Spg004382
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR033945 - Cytochrome c oxidase subunit III domain IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AMC32832.1 cytochrome c oxidase subunit 3 [Chamaecrista fasciculata]

2.1e-60

99.17

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

KAG6585954.1 putative ATP synthase protein YMF19, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-62

68.64

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNT ILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLA VFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTAL--GPGSEGNELGSFFST
        IYGSTFFLATGFHGFHVIIG  +       Q   + + T+E   HH   +     W      VR+     +Y    W   TAL  GPGSEGNEL S    
Subjt:  IYGSTFFLATGFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTAL--GPGSEGNELGSFFST

Query:  LFFIRVRSACASRAIGALFS
        LF I VRSA  +R    LFS
Subjt:  LFFIRVRSACASRAIGALFS

YP_009531165.1 cytochrome c oxidase subunit III [Leucaena trichandra]

7.2e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

YP_009560011.1 cytochrome c oxidase subunit 3 [Acacia ligulata]

7.2e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

YP_009913616.1 cytochrome c oxidase subunit 3 [Luffa acutangula]

7.2e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

TrEMBL top hits

e value

%identity

Alignment

A0A120IH48 Cytochrome c oxidase subunit 3

1.0e-60

99.17

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A385I1U7 Cytochrome c oxidase subunit 3

3.5e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A3S5HWV6 Cytochrome c oxidase subunit 3

3.5e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A7D6CA08 Cytochrome c oxidase subunit 3

3.5e-61

100

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A7L7T968 Cytochrome c oxidase subunit 3

1.3e-60

99.17

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAP VEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

3.4e-61

93.55

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDP EIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLA+VFTGFQGMEYYQAP TISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIGCRYT
        IYGSTF+LATGFHGFHVIIG  ++
Subjt:  IYGSTFFLATGFHGFHVIIGCRYT

P14852 Cytochrome c oxidase subunit 3

9.1e-59

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDP EIP LNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATV LALV TGFQGMEYYQAP TISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

P14853 Cytochrome c oxidase subunit 3

4.4e-61

97.5

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPP GI VLDP EIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Q03227 Cytochrome c oxidase subunit 3

4.0e-62

99.17

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Q36952 Cytochrome c oxidase subunit 3

1.8e-59

95.83

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDP EIP LNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATVSLALV TGFQGMEYYQAP TISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

1.7e-60

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFFWASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

ATMG00730.1 cytochrome c oxidase subunit 3

1.7e-60

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Query:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFFWASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Sequences

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CDS sequence

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ATGTTCCTTTTTGCTTTTTTTTGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGA
AATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAG
CTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACT
GGCTTTCATGGTTTTCATGTGATTATAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTCAGTAAAGTAGTTAACCAAACACAAGAGATAGTTGCCCATCATAC
GGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGAAAGACTGCACTGCTTTGG
GCCCAGGAAGCGAAGGGAATGAGCTCGGCAGCTTCTTCTCCACACTGTTTTTTATCCGTGTCCGTTCCGCATGCGCTTCGCGCGCCATTGGCGCTTTGTTCTCCTCTTAT
TCTTCATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATTGAAAAGGCTGTCTCACATCGAGATGTCGATTCGTTTTCCGCCCCCAATGAGATGGGGAA
TTAG

mRNA sequence

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Protein sequence

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MFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
GFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTALGPGSEGNELGSFFSTLFFIRVRSACASRAIGALFSSY
SSLDGSDGLRRSFPTQIEKAVSHRDVDSFSAPNEMGN

Spg004382 (gene) of Sponge gourd (cylindrica) v1 genome