; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004404 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004404
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold9:12179082..12181209
RNA-Seq ExpressionSpg004404
SyntenySpg004404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]1.8e-0832.57Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR
        +KI+ TPFE ++S   L+ E  KIF  +A + +NNL  L+E V  YF+ +E                     TK  ++     E+R+++E   +Q++LAR
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR
               L  K A+LEAKL  V  +   LS  +SK E +L  ++  +SK  EEI  ++CA  +  +D + L+ LR
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]3.9e-0825.65Show/hide
Query:  IRPSVFKAVSLMAKGKTFRLVIPILANIYHELSKVSNTSTIQLKKRVITALEID-TRKEPKDPGKLLISMTS-PSRLPLNDRVQEEEECSSEQSLTSPDA
        +R  VF A SLMA G  + L +P+LANIYH LS ++  S +      I  ++           G   + + + P   PLN  V+   E  S++SLT P  
Subjt:  IRPSVFKAVSLMAKGKTFRLVIPILANIYHELSKVSNTSTIQLKKRVITALEID-TRKEPKDPGKLLISMTS-PSRLPLNDRVQEEEECSSEQSLTSPDA

Query:  FASSVKNFGNS---------------------HASS-----------------------------------SKQVVNSSFRSTEKVPRHTH---EKVVVP
          S+++  G S                     H S+                                   S+  +++S R   + P  +    EKVV+ 
Subjt:  FASSVKNFGNS---------------------HASS-----------------------------------SKQVVNSSFRSTEKVPRHTH---EKVVVP

Query:  VF------------EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE----------ATKLHLEKA--LSTESRVVEEKDAL
         F            +KI+RTPFE I     L  E   +   + +  TN L PL+E++ SY K+++          A  L  +KA  L  ++  +EE   L
Subjt:  VF------------EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE----------ATKLHLEKA--LSTESRVVEEKDAL

Query:  QKQL---ARSISEVA-DLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRR
         ++L   A  I E A  L  +  ELE +L +++A+ E LS    +K + +  ++L V+K+++E++ +E  P ++   +  LA +RR
Subjt:  QKQL---ARSISEVA-DLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRR

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]3.6e-0933.14Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR
        +KI+RTPFE ++S   L+ E  KIF  +A + +NNL  L+E V  YF+ +E                     TK  ++     E+R+++E   +Q++LAR
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR
               L  K A+LEAKL  V  +   LS  +SK E +L  ++  +SK  EEI  ++CA  +  +D + L  LR
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]8.2e-0633.12Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE-ATKLHLEKALST-------------------ESRVVEEKDALQKQLAR
        +KI+RTPFE ++S   LE E HKIFD +A   ++NL  L+E V  YF+ +E   ++H    L +                   E+R++ E +  ++ L R
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE-ATKLHLEKALST-------------------ESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECA
               L  K A+LEAKL  V A+    S  + K + +L  ++  +SK  EEI  +ECA
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.1e-1034.86Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE-ATKLHLEKALST-------------------ESRVVEEKDALQKQLAR
        +KI+RTPFE ++S   LE E HKIFD +A + ++NL  L+E V  YF+ +E   ++H    L +                   E+R++ E +  +++L R
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE-ATKLHLEKALST-------------------ESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR
               L  K A+LEAKL  V A+   LS  + K + +L  ++  +SK  EEI  +ECAP V   D + L+TLR
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR

TrEMBL top hitse value%identityAlignment
A0A2N9HH11 Uncharacterized protein8.0e-0729.53Show/hide
Query:  KVPRHTHEKVVVPVFEKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE---------ATKLHLE------------KALSTE
        K  RH    +   + EKI++TPF+ +AS   L++E  KI   + + T  ++ PLQ+ V  + +              ++ LE              L+ E
Subjt:  KVPRHTHEKVVVPVFEKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE---------ATKLHLE------------KALSTE

Query:  SRVVEEKDALQKQLARSISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRRL
        S  +E +D+     +R+ +E++ + +K  EL  +L  +  +   L NS+S  E+ L   + AVS+I+EEIS+IE  PT+  SD   L  LR L
Subjt:  SRVVEEKDALQKQLARSISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRRL

A0A2N9HUN4 Uncharacterized protein8.0e-0729.53Show/hide
Query:  KVPRHTHEKVVVPVFEKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE---------ATKLHLE------------KALSTE
        K  RH    +   + EKI++TPF+ +AS   L++E  KI   + + T  ++ PLQ+ V  + +              ++ LE              L+ E
Subjt:  KVPRHTHEKVVVPVFEKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE---------ATKLHLE------------KALSTE

Query:  SRVVEEKDALQKQLARSISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRRL
        S  +E +D+     +R+ +E++ + +K  EL  +L  +  +   L NS+S  E+ L   + AVS+I+EEIS+IE  PT+  SD   L  LR L
Subjt:  SRVVEEKDALQKQLARSISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRRL

A0A5A7SJ85 Uncharacterized protein8.6e-0932.57Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR
        +KI+ TPFE ++S   L+ E  KIF  +A + +NNL  L+E V  YF+ +E                     TK  ++     E+R+++E   +Q++LAR
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR
               L  K A+LEAKL  V  +   LS  +SK E +L  ++  +SK  EEI  ++CA  +  +D + L+ LR
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR

A0A5A7V3X5 PMD domain-containing protein1.9e-0825.65Show/hide
Query:  IRPSVFKAVSLMAKGKTFRLVIPILANIYHELSKVSNTSTIQLKKRVITALEID-TRKEPKDPGKLLISMTS-PSRLPLNDRVQEEEECSSEQSLTSPDA
        +R  VF A SLMA G  + L +P+LANIYH LS ++  S +      I  ++           G   + + + P   PLN  V+   E  S++SLT P  
Subjt:  IRPSVFKAVSLMAKGKTFRLVIPILANIYHELSKVSNTSTIQLKKRVITALEID-TRKEPKDPGKLLISMTS-PSRLPLNDRVQEEEECSSEQSLTSPDA

Query:  FASSVKNFGNS---------------------HASS-----------------------------------SKQVVNSSFRSTEKVPRHTH---EKVVVP
          S+++  G S                     H S+                                   S+  +++S R   + P  +    EKVV+ 
Subjt:  FASSVKNFGNS---------------------HASS-----------------------------------SKQVVNSSFRSTEKVPRHTH---EKVVVP

Query:  VF------------EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE----------ATKLHLEKA--LSTESRVVEEKDAL
         F            +KI+RTPFE I     L  E   +   + +  TN L PL+E++ SY K+++          A  L  +KA  L  ++  +EE   L
Subjt:  VF------------EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE----------ATKLHLEKA--LSTESRVVEEKDAL

Query:  QKQL---ARSISEVA-DLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRR
         ++L   A  I E A  L  +  ELE +L +++A+ E LS    +K + +  ++L V+K+++E++ +E  P ++   +  LA +RR
Subjt:  QKQL---ARSISEVA-DLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRR

A0A5D3C453 Uncharacterized protein1.7e-0933.14Show/hide
Query:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR
        +KI+RTPFE ++S   L+ E  KIF  +A + +NNL  L+E V  YF+ +E                     TK  ++     E+R+++E   +Q++LAR
Subjt:  EKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLE--------------------ATKLHLEKALSTESRVVEEKDALQKQLAR

Query:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR
               L  K A+LEAKL  V  +   LS  +SK E +L  ++  +SK  EEI  ++CA  +  +D + L  LR
Subjt:  SISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAAGGTGAACGGAGGGAATGCTAACCACATTCGTCCCAGTGTTTTTAAAGCTGTCAGCTTAATGGCCAAGGGGAA
AACTTTCCGTCTTGTAATCCCCATCCTTGCCAACATCTACCACGAGTTAAGTAAAGTTTCCAATACTTCTACGATTCAACTGAAGAAGAGAGTCATAACAGCACTGGAGA
TCGACACTAGAAAAGAGCCAAAAGACCCAGGAAAGCTTCTGATCTCGATGACAAGTCCATCAAGACTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATGTTCGAGC
GAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCCGTGAAGAACTTCGGAAATTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCGTCTTTTCGTTCTACTGA
GAAAGTCCCTCGACATACTCATGAGAAAGTGGTTGTCCCAGTCTTTGAGAAGATTGTACGCACTCCTTTTGAAGATATTGCTAGCCTTGAGCACCTTGAGCAAGAATCTC
ACAAGATCTTCGATGTAATGGCAGAGGCCACTACGAACAACTTGAAACCTCTGCAAGAATTTGTTGGTAGCTACTTCAAGAAATTGGAGGCAACGAAGCTCCACTTAGAG
AAGGCTTTGTCTACCGAAAGTCGTGTTGTTGAGGAGAAAGATGCACTTCAGAAACAACTTGCTCGCTCTATCTCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACT
AGAGGCCAAGTTAACAGCTGTAGACGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTAAAAAGGAAAAGGACTTGGCTCATGAAAAACTTGCAGTTTCGAAAATACGTG
AGGAGATTAGTGACATCGAGTGTGCTCCCACCGTCAGCGCTTCAGACGTTCGCACCCTAGCGACACTTCGCAGACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAAGGTGAACGGAGGGAATGCTAACCACATTCGTCCCAGTGTTTTTAAAGCTGTCAGCTTAATGGCCAAGGGGAA
AACTTTCCGTCTTGTAATCCCCATCCTTGCCAACATCTACCACGAGTTAAGTAAAGTTTCCAATACTTCTACGATTCAACTGAAGAAGAGAGTCATAACAGCACTGGAGA
TCGACACTAGAAAAGAGCCAAAAGACCCAGGAAAGCTTCTGATCTCGATGACAAGTCCATCAAGACTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATGTTCGAGC
GAGCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCCGTGAAGAACTTCGGAAATTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCGTCTTTTCGTTCTACTGA
GAAAGTCCCTCGACATACTCATGAGAAAGTGGTTGTCCCAGTCTTTGAGAAGATTGTACGCACTCCTTTTGAAGATATTGCTAGCCTTGAGCACCTTGAGCAAGAATCTC
ACAAGATCTTCGATGTAATGGCAGAGGCCACTACGAACAACTTGAAACCTCTGCAAGAATTTGTTGGTAGCTACTTCAAGAAATTGGAGGCAACGAAGCTCCACTTAGAG
AAGGCTTTGTCTACCGAAAGTCGTGTTGTTGAGGAGAAAGATGCACTTCAGAAACAACTTGCTCGCTCTATCTCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACT
AGAGGCCAAGTTAACAGCTGTAGACGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTAAAAAGGAAAAGGACTTGGCTCATGAAAAACTTGCAGTTTCGAAAATACGTG
AGGAGATTAGTGACATCGAGTGTGCTCCCACCGTCAGCGCTTCAGACGTTCGCACCCTAGCGACACTTCGCAGACTTTAG
Protein sequenceShow/hide protein sequence
MFQSAPGLPFGSKVNGGNANHIRPSVFKAVSLMAKGKTFRLVIPILANIYHELSKVSNTSTIQLKKRVITALEIDTRKEPKDPGKLLISMTSPSRLPLNDRVQEEEECSS
EQSLTSPDAFASSVKNFGNSHASSSKQVVNSSFRSTEKVPRHTHEKVVVPVFEKIVRTPFEDIASLEHLEQESHKIFDVMAEATTNNLKPLQEFVGSYFKKLEATKLHLE
KALSTESRVVEEKDALQKQLARSISEVADLKTKVAELEAKLTAVDAKVESLSNSVSKKEKDLAHEKLAVSKIREEISDIECAPTVSASDVRTLATLRRL