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Spg004408 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004408
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 1
Genome locationscaffold9:11296284..11297825
RNA-Seq ExpressionSpg004408
SyntenySpg004408
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003724 - RNA helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1211023.1 hypothetical protein CJ030_MR6G019586 [Morella rubra]1.4e-0483.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DE+GALVDELV+NT++LIRATSREIDKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
XP_004141514.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]1.4e-0486.67Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        D+IGALVD+LVLNT+RLIRATS+EIDKWKR
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
XP_016902400.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]6.3e-0590Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        D+IGALVD+LVLNT+RLIRATSREIDKWKR
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
XP_022156030.1 glycine-rich cell wall structural protein 1 [Momordica charantia]2.8e-0593.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DEIGALVDELV+NTRRLIRATSREIDKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
XP_042976365.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic [Carya illinoinensis]1.4e-0483.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DEIGALVDELV+NT++LIRATSRE+DKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
TrEMBL top hitse value%identityAlignment
A0A0A0KSM8 Uncharacterized protein6.8e-0586.67Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        D+IGALVD+LVLNT+RLIRATS+EIDKWKR
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
A0A1S4E347 glycine-rich cell wall structural protein 13.1e-0590Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        D+IGALVD+LVLNT+RLIRATSREIDKWKR
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
A0A5N6R0G3 Uncharacterized protein6.8e-0583.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DEIGALVDELV+NT++LIRATSRE+DKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
A0A6A1VE47 Uncharacterized protein6.8e-0583.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DE+GALVDELV+NT++LIRATSREIDKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
A0A6J1DP59 glycine-rich cell wall structural protein 11.4e-0593.33Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKWKR
        DEIGALVDELV+NTRRLIRATSREIDKW+R
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKWKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10330.1 glycine-rich protein4.4e-0453.57Show/hide
Query:  DEIGALVDELVLNTRRLIRATSREIDKW
        +E+ +L+DELV++T++L++AT+ EIDKW
Subjt:  DEIGALVDELVLNTRRLIRATSREIDKW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCCAAGCCACTGGTCAAACTGACTATTGCTGACCCTGTCAGTTTGCAGAGATTCTTGCATAAGCTGCCAGTGGTTAGTGTTAAGTCTATTACAATGAGGGTTAG
CTGTTGTCCACATTGTTCGACAATACACTACTTTGTCCTTGATTGTCTGAGTGAAGTCATAGAAACTGACAGTCTGATTGTCCATATTATTGAACTACCGGATGAGATTG
GTGCGCTTGTTGACGAGCTTGTCCTCAATACGAGGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCCAAGCCACTGGTCAAACTGACTATTGCTGACCCTGTCAGTTTGCAGAGATTCTTGCATAAGCTGCCAGTGGTTAGTGTTAAGTCTATTACAATGAGGGTTAG
CTGTTGTCCACATTGTTCGACAATACACTACTTTGTCCTTGATTGTCTGAGTGAAGTCATAGAAACTGACAGTCTGATTGTCCATATTATTGAACTACCGGATGAGATTG
GTGCGCTTGTTGACGAGCTTGTCCTCAATACGAGGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA
Protein sequenceShow/hide protein sequence
MLPKPLVKLTIADPVSLQRFLHKLPVVSVKSITMRVSCCPHCSTIHYFVLDCLSEVIETDSLIVHIIELPDEIGALVDELVLNTRRLIRATSREIDKWKR