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Spg004410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTMV resistance protein N-like
Genome locationscaffold9:9117017..9117853
RNA-Seq ExpressionSpg004410
SyntenySpg004410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039320.1 TMV resistance protein N-like [Cucumis melo var. makuwa]1.3e-0926.79Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG
        ++ S   R + QRYIE+ T  +EEY  +     +  CF+H++ G++I   C+  +   S D     IAL+    +    +     + +  NF+I LETD 
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG

Query:  YPPKCLRNVEKKCPMFSRAK-VCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVSKDR
         P K      K        + + VF+IPF  +S  +  +    +  SI   NP +KV+ CG S+LF+++  VF+  ++     S  F ++ M   +   +
Subjt:  YPPKCLRNVEKKCPMFSRAK-VCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVSKDR

Query:  SH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK
        +H     L EG             R V V  P+          +D  SS  + E     + H  ++L+R+LKS++RR F+
Subjt:  SH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK

XP_008459548.2 PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]3.3e-1027.56Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG
        ++ S   R + QRYIE+ T  +EEY  +     +  CF+H++ G++I   C+  +   S D     IAL+    +    +     + +  NF+I LETD 
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG

Query:  YPPKC----LRNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVS
         P K      +N +K  P      + VF+IPF  +S  +  +    +  SI   NP +KV+ CG S+LF+++  VF+  ++     S  F ++ M   + 
Subjt:  YPPKC----LRNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVS

Query:  KDRSH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK
          ++H     L EG             R V V  P+          +D  SS  + E     + H  ++LKR+LKS++RR F+
Subjt:  KDRSH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK

XP_022141782.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia]1.5e-1028.57Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLS------SSNFMIRLE
        D+ S   R + QRYIE  T  +EEY  S     +  CF+HK+ G++I   C      S  + R       +GI    L+AF +L       S NF+I+LE
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLS------SSNFMIRLE

Query:  TDGYPPKCL----RNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMFTRVSKD
        TD  P K       N +K  P      + VFYIPF K+S  +       +  SI   NP +KV+ CG S+LF+++  +F+  ++   F +     +   D
Subjt:  TDGYPPKCL----RNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMFTRVSKD

Query:  RSHLTEG-RYVEVE---------------------------DPEQDDVSSTSSSEDDDNSSGH------SIVLLKRSLKSIIRRTFK
          H+  G ++VEV                             P +   ++   S   + S+G       S ++LK+SLKS++ RTF+
Subjt:  RSHLTEG-RYVEVE---------------------------DPEQDDVSSTSSSEDDDNSSGH------SIVLLKRSLKSIIRRTFK

XP_022141874.1 TMV resistance protein N-like isoform X1 [Momordica charantia]1.1e-0826.18Show/hide
Query:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE
        R + QRY+E+ T  +E+Y       +   CF+ K  G +I   C+  + S    +   A+  A  +   +        S +F+IR+ETD  P K    ++
Subjt:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE

Query:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE
             + S   + VFYIP  K+SE +       I  SI   NP +KV+ CGAS+L+ ++   F+  ++   F +   +           +   D S L +
Subjt:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE

Query:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF
        G  RY                        PE  +D  +ST++S +   +   SI++LKR+LK+++ RTF+   L+
Subjt:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF

XP_022141875.1 uncharacterized protein LOC111012131 isoform X2 [Momordica charantia]1.1e-0826.18Show/hide
Query:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE
        R + QRY+E+ T  +E+Y       +   CF+ K  G +I   C+  + S    +   A+  A  +   +        S +F+IR+ETD  P K    ++
Subjt:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE

Query:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE
             + S   + VFYIP  K+SE +       I  SI   NP +KV+ CGAS+L+ ++   F+  ++   F +   +           +   D S L +
Subjt:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE

Query:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF
        G  RY                        PE  +D  +ST++S +   +   SI++LKR+LK+++ RTF+   L+
Subjt:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF

TrEMBL top hitse value%identityAlignment
A0A1S3CAF1 LOW QUALITY PROTEIN: TMV resistance protein N-like1.6e-1027.56Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG
        ++ S   R + QRYIE+ T  +EEY  +     +  CF+H++ G++I   C+  +   S D     IAL+    +    +     + +  NF+I LETD 
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG

Query:  YPPKC----LRNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVS
         P K      +N +K  P      + VF+IPF  +S  +  +    +  SI   NP +KV+ CG S+LF+++  VF+  ++     S  F ++ M   + 
Subjt:  YPPKC----LRNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVS

Query:  KDRSH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK
          ++H     L EG             R V V  P+          +D  SS  + E     + H  ++LKR+LKS++RR F+
Subjt:  KDRSH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK

A0A5A7T7U3 TMV resistance protein N-like6.1e-1026.79Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG
        ++ S   R + QRYIE+ T  +EEY  +     +  CF+H++ G++I   C+  +   S D     IAL+    +    +     + +  NF+I LETD 
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINM---TKLAAFGKLSSSNFMIRLETDG

Query:  YPPKCLRNVEKKCPMFSRAK-VCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVSKDR
         P K      K        + + VF+IPF  +S  +  +    +  SI   NP +KV+ CG S+LF+++  VF+  ++     S  F ++ M   +   +
Subjt:  YPPKCLRNVEKKCPMFSRAK-VCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNML-----SKCFQNRPMFTRVSKDR

Query:  SH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK
        +H     L EG             R V V  P+          +D  SS  + E     + H  ++L+R+LKS++RR F+
Subjt:  SH-----LTEG-------------RYVEVEDPE----------QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFK

A0A6J1CJB7 uncharacterized protein LOC111012131 isoform X25.2e-0926.18Show/hide
Query:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE
        R + QRY+E+ T  +E+Y       +   CF+ K  G +I   C+  + S    +   A+  A  +   +        S +F+IR+ETD  P K    ++
Subjt:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE

Query:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE
             + S   + VFYIP  K+SE +       I  SI   NP +KV+ CGAS+L+ ++   F+  ++   F +   +           +   D S L +
Subjt:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE

Query:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF
        G  RY                        PE  +D  +ST++S +   +   SI++LKR+LK+++ RTF+   L+
Subjt:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF

A0A6J1CK08 TMV resistance protein N-like isoform X15.2e-0926.18Show/hide
Query:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE
        R + QRY+E+ T  +E+Y       +   CF+ K  G +I   C+  + S    +   A+  A  +   +        S +F+IR+ETD  P K    ++
Subjt:  RMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVE

Query:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE
             + S   + VFYIP  K+SE +       I  SI   NP +KV+ CGAS+L+ ++   F+  ++   F +   +           +   D S L +
Subjt:  KKC-PMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMF----------TRVSKDRSHLTE

Query:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF
        G  RY                        PE  +D  +ST++S +   +   SI++LKR+LK+++ RTF+   L+
Subjt:  G--RYVEV-------------------EDPE--QDDVSSTSSSEDDDNSSGHSIVLLKRSLKSIIRRTFKVSSLF

A0A6J1CKU3 LOW QUALITY PROTEIN: TMV resistance protein N-like7.2e-1128.57Show/hide
Query:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLS------SSNFMIRLE
        D+ S   R + QRYIE  T  +EEY  S     +  CF+HK+ G++I   C      S  + R       +GI    L+AF +L       S NF+I+LE
Subjt:  DIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLS------SSNFMIRLE

Query:  TDGYPPKCL----RNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMFTRVSKD
        TD  P K       N +K  P      + VFYIPF K+S  +       +  SI   NP +KV+ CG S+LF+++  +F+  ++   F +     +   D
Subjt:  TDGYPPKCL----RNVEKKCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMFTRVSKD

Query:  RSHLTEG-RYVEVE---------------------------DPEQDDVSSTSSSEDDDNSSGH------SIVLLKRSLKSIIRRTFK
          H+  G ++VEV                             P +   ++   S   + S+G       S ++LK+SLKS++ RTF+
Subjt:  RSHLTEG-RYVEVE---------------------------DPEQDDVSSTSSSEDDDNSSGH------SIVLLKRSLKSIIRRTFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACATTTTTAGTACAGAAAACCGGATGCTCAAACAGAGATACATTGAGATGAAAACTTCTGATCGAGAAGAATATGAGCTTAGTAGTGAACTGGATCACGTCTT
TGAATGCTTTGAACATAAAGAGAAAGGGAATACTATTGAGTTTTGTTGCAACAATCCACATGCTTCGAGTAGCTACGATAAAAGGTTTGACGCAATTGCTCTCGCGGTTG
GTATAAACATGACAAAATTAGCAGCTTTTGGCAAATTGTCTAGCAGCAACTTCATGATTCGTTTAGAAACCGATGGGTACCCTCCAAAATGTTTGCGGAATGTGGAAAAG
AAGTGCCCAATGTTTTCTAGAGCCAAAGTTTGTGTATTTTATATACCATTTGAGAAGCTGTCGGAAGAGGTGAGGAATGAAGACTTCCGCTACATCAAGGCTTCAATTAC
ATGTAAGAACCCAGACATCAAGGTTGAAAAGTGTGGTGCATCGGTATTGTTTCGAGAAAGCGTTGTAGTGTTTTTGAGGAACATGTTAAGCAAATGTTTCCAGAATCGAC
CAATGTTTACAAGGGTATCGAAAGACCGTAGTCACTTAACTGAGGGTAGATATGTGGAGGTTGAGGACCCAGAACAGGATGATGTTAGCTCAACTTCATCTTCTGAGGAT
GACGATAACTCTTCTGGACACTCAATTGTATTGTTGAAGAGAAGCCTCAAGTCTATTATTCGGAGAACGTTCAAGGTCTCTTCTCTGTTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACATTTTTAGTACAGAAAACCGGATGCTCAAACAGAGATACATTGAGATGAAAACTTCTGATCGAGAAGAATATGAGCTTAGTAGTGAACTGGATCACGTCTT
TGAATGCTTTGAACATAAAGAGAAAGGGAATACTATTGAGTTTTGTTGCAACAATCCACATGCTTCGAGTAGCTACGATAAAAGGTTTGACGCAATTGCTCTCGCGGTTG
GTATAAACATGACAAAATTAGCAGCTTTTGGCAAATTGTCTAGCAGCAACTTCATGATTCGTTTAGAAACCGATGGGTACCCTCCAAAATGTTTGCGGAATGTGGAAAAG
AAGTGCCCAATGTTTTCTAGAGCCAAAGTTTGTGTATTTTATATACCATTTGAGAAGCTGTCGGAAGAGGTGAGGAATGAAGACTTCCGCTACATCAAGGCTTCAATTAC
ATGTAAGAACCCAGACATCAAGGTTGAAAAGTGTGGTGCATCGGTATTGTTTCGAGAAAGCGTTGTAGTGTTTTTGAGGAACATGTTAAGCAAATGTTTCCAGAATCGAC
CAATGTTTACAAGGGTATCGAAAGACCGTAGTCACTTAACTGAGGGTAGATATGTGGAGGTTGAGGACCCAGAACAGGATGATGTTAGCTCAACTTCATCTTCTGAGGAT
GACGATAACTCTTCTGGACACTCAATTGTATTGTTGAAGAGAAGCCTCAAGTCTATTATTCGGAGAACGTTCAAGGTCTCTTCTCTGTTTTGTTAA
Protein sequenceShow/hide protein sequence
MADIFSTENRMLKQRYIEMKTSDREEYELSSELDHVFECFEHKEKGNTIEFCCNNPHASSSYDKRFDAIALAVGINMTKLAAFGKLSSSNFMIRLETDGYPPKCLRNVEK
KCPMFSRAKVCVFYIPFEKLSEEVRNEDFRYIKASITCKNPDIKVEKCGASVLFRESVVVFLRNMLSKCFQNRPMFTRVSKDRSHLTEGRYVEVEDPEQDDVSSTSSSED
DDNSSGHSIVLLKRSLKSIIRRTFKVSSLFC