; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004411 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004411
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold9:13520432..13524720
RNA-Seq ExpressionSpg004411
SyntenySpg004411
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8734433.1 Eukaryotic translation initiation factor 3 subunit I [Hibiscus syriacus]2.1e-1026.46Show/hide
Query:  VIFQYKWQDFCAHPQEAIVLLVREFYAVLRE--ESISMAVVRGKMGVQWKESQTKVKSLVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLM
        +  Q+KW+    HP      LV+ FYA + E  E + M  V      QW   Q   +++    L+  + +W HF+K++L+PT++++T+S  R+  L+ ++
Subjt:  VIFQYKWQDFCAHPQEAIVLLVREFYAVLRE--ESISMAVVRGKMGVQWKESQTKVKSLVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLM

Query:  KGVKIVPGK--DEERH--FFKPTIDLS----LIGKLQQNNIQRKDKASTSQATPPVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRTYWAYA
         G  I   K   E+ H    +P   L+    L+G  +    ++ +  S +  TP                 P    E +     Q++Q+ + + TY++Y 
Subjt:  KGVKIVPGK--DEERH--FFKPTIDLS----LIGKLQQNNIQRKDKASTSQATPPVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRTYWAYA

Query:  KERDEAIREFYLSIAPSIAPVFPNFPQSLLPPEEK-DSDED-----GEEKESSSDEE
        K RDE +   ++ I P      P FP +LL P E  ++ ED      EE    +DEE
Subjt:  KERDEAIREFYLSIAPSIAPVFPNFPQSLLPPEEK-DSDED-----GEEKESSSDEE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.2e-1224.84Show/hide
Query:  RVIFQYKWQDFCAHPQEAIVLLVREFYAVLREESISMAVVRG-------------------------------------------KMGVQWKESQTKVKS
        +VI Q+ W+ FCAHP++ IV LVREFYA L +   +   VRG                                             G +W  S     +
Subjt:  RVIFQYKWQDFCAHPQEAIVLLVREFYAVLREESISMAVVRG-------------------------------------------KMGVQWKESQTKVKS

Query:  LVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLMKGVKIVPGK-----------DEERHFFKPTIDLSLIGKLQQNNIQRKDKA-STSQATP
         + S L   + VW HF+K+RL+PTT+  T+S DR++LL+ ++ G  I  G+            +    F P++   L    +   +  ++K  +T +   
Subjt:  LVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLMKGVKIVPGK-----------DEERHFFKPTIDLSLIGKLQQNNIQRKDKA-STSQATP

Query:  PVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFP
             +A          PS+S  A A + R    I + L+                             +WAY+KERD A+++   +      P FP FP
Subjt:  PVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFP

Query:  QSLLP----PEEKDSDEDGEEK
        Q +L       E +SD+DG  +
Subjt:  QSLLP----PEEKDSDEDGEEK

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-1224.84Show/hide
Query:  RVIFQYKWQDFCAHPQEAIVLLVREFYAVLREESISMAVVRG-------------------------------------------KMGVQWKESQTKVKS
        +VI Q+ W+ FCAHP++ IV LVREFYA L +   +   VRG                                             G +W  S     +
Subjt:  RVIFQYKWQDFCAHPQEAIVLLVREFYAVLREESISMAVVRG-------------------------------------------KMGVQWKESQTKVKS

Query:  LVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLMKGVKIVPGK-----------DEERHFFKPTIDLSLIGKLQQNNIQRKDKA-STSQATP
         + S L   + VW HF+K+RL+PTT+  T+S DR++LL+ ++ G  I  G+            +    F P++   L    +   +  ++K  +T +   
Subjt:  LVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLMKGVKIVPGK-----------DEERHFFKPTIDLSLIGKLQQNNIQRKDKA-STSQATP

Query:  PVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFP
             +A          PS+S  A A + R    I + L+                             +WAY+KERD A+++   +      P FP FP
Subjt:  PVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRT----------------------------YWAYAKERDEAIREFYLSIAPSIAPVFPNFP

Query:  QSLLP----PEEKDSDEDGEEK
        Q +L       E +SD+DG  +
Subjt:  QSLLP----PEEKDSDEDGEEK

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I1.0e-1026.46Show/hide
Query:  VIFQYKWQDFCAHPQEAIVLLVREFYAVLRE--ESISMAVVRGKMGVQWKESQTKVKSLVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLM
        +  Q+KW+    HP      LV+ FYA + E  E + M  V      QW   Q   +++    L+  + +W HF+K++L+PT++++T+S  R+  L+ ++
Subjt:  VIFQYKWQDFCAHPQEAIVLLVREFYAVLRE--ESISMAVVRGKMGVQWKESQTKVKSLVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLM

Query:  KGVKIVPGK--DEERH--FFKPTIDLS----LIGKLQQNNIQRKDKASTSQATPPVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRTYWAYA
         G  I   K   E+ H    +P   L+    L+G  +    ++ +  S +  TP                 P    E +     Q++Q+ + + TY++Y 
Subjt:  KGVKIVPGK--DEERH--FFKPTIDLS----LIGKLQQNNIQRKDKASTSQATPPVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRTYWAYA

Query:  KERDEAIREFYLSIAPSIAPVFPNFPQSLLPPEEK-DSDED-----GEEKESSSDEE
        K RDE +   ++ I P      P FP +LL P E  ++ ED      EE    +DEE
Subjt:  KERDEAIREFYLSIAPSIAPVFPNFPQSLLPPEEK-DSDED-----GEEKESSSDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCACAACCGAACTCTTCTCACTGTAGAACATTTCTGTGTCCACGGATATAGACCTATACCGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAA
TACGTCTGTATCGAATACAAAGCGGGCCGTATCACATAGTGTTATCAGGATAAGGGGGCTATTTATAGGAGCAGAAACAGACCTTTCTTGCTGCCCAAGACGCACAGCGT
CGAGACGCTACGTCACAACGTCGCGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAGCGTCGCGACGCTACGCGGACAGGATCACGACGCTACCGCGATTCTGGAATTTTC
TTCGCTGCTTGCCTAGCGTCGAGACGCTCTGGTCCTAGCTTCGAGGGAGATGCCGAGTTCGTCTTCGCCGCCGTCCATCAAACCCAAAAACCCGCAGCTCAACAGTTCAA
GAAACGTTCGTGGGAGTGGTTTGCGATGATCCGAGAGATGGGTGCTCAGAGACCTGCCCTTGAAGAGGAAGGAAATCGACAAGATGAGAAAGAAGCCGCCAAGGCAGCTG
GAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCTGAACCTTCAACTAATCCTTCTCGATCTTGCAGGATCAAACCCGTTGTTACTTATAGAGCAAGAAAGAGG
AGCCCTAAGAAAAATGTGCCTGAAAAACCGCTTGGGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCGGATGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGC
TCTTGCGATTGCTGAGGGATATAAGGCTGAACAAGATGCTTTAAAAGAGATTGAGGATGAGAGAGAGATGGAAAACCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAAG
AAAGAGACCGTGAAGAAGAGAAAAGAATGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGCAAGAAAATATGACGAAAACCTCAGGAGGGCAGGC
ATGGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGGGAAGAAATAAAAGAAAACGAAAAGAGAAGGAAGGAAGCTGAAGACTTCCTAGAGCCTTTGAGCCACTCCAT
AAGGCTCAAAGTGAAGCTGAAGCACTGCAAGGAAGGAGAAGTAGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATTGATC
AGCCAGCTGAAGAGGTTCTTGAGCCTCTATTCACGAATGAACCACCAGCAGCTGATAGCACCTCTTCGAGAGAGAAGAGGGACGAAGATGAAAAGGAAGATGAGGAGGCC
AGAACCTTCACTAACTCTGATACAGAATCTGATTCGGAGATAAGGGAACTAGATGGCGACCAAGTCCCTATCTCTGCAGCGTTTAGAAGAAAGAGAAAGAGAGAGATAAA
GGACGAGAGAAGGACAAAGAACAAGAATGACCCAATATTTGCCAAGAGGCCGAGGATGAGGTCCATGGACGCCTCTTCTACAGATCCTCCTACTACCTCACCCGCCAAGC
CAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCGTTCCCTGACGAGCACTGCCATAATTCGAAAACAAGAGTTATCTTCCAGTACAAGTGGCAGGACTTCTGT
GCTCACCCTCAGGAGGCTATTGTGCTTCTAGTTCGAGAGTTTTACGCCGTCCTGAGGGAGGAAAGTATTAGCATGGCGGTGGTGAGGGGGAAGATGGGGGTTCAGTGGAA
AGAATCACAGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGTCAGAATCGGCAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCAACGACAGCA
CGATTTCAATGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGCGTCACTTCTTCAAGCCGACCATCGACCTGTCC
CTGATTGGAAAGCTCCAACAGAACAACATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCCTGTAGGGCCAAATGTAGCTTCTCCATCCCAACACACTCC
TTTCACAGGGCCTTCGACATCATCAGAGGCCCTAGCTTTTGCCTACCGCCAACTAGATCAAATCAGGGAGAACCTGAGGACTTATTGGGCGTATGCAAAGGAGAGGGATG
AAGCTATTAGAGAGTTCTATCTCTCTATTGCTCCGAGTATTGCTCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTACCTCCGGAAGAGAAGGATTCTGATGAAGATGGT
GAAGAGAAAGAGAGTTCCTCAGACGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCCACAACCGAACTCTTCTCACTGTAGAACATTTCTGTGTCCACGGATATAGACCTATACCGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAA
TACGTCTGTATCGAATACAAAGCGGGCCGTATCACATAGTGTTATCAGGATAAGGGGGCTATTTATAGGAGCAGAAACAGACCTTTCTTGCTGCCCAAGACGCACAGCGT
CGAGACGCTACGTCACAACGTCGCGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAGCGTCGCGACGCTACGCGGACAGGATCACGACGCTACCGCGATTCTGGAATTTTC
TTCGCTGCTTGCCTAGCGTCGAGACGCTCTGGTCCTAGCTTCGAGGGAGATGCCGAGTTCGTCTTCGCCGCCGTCCATCAAACCCAAAAACCCGCAGCTCAACAGTTCAA
GAAACGTTCGTGGGAGTGGTTTGCGATGATCCGAGAGATGGGTGCTCAGAGACCTGCCCTTGAAGAGGAAGGAAATCGACAAGATGAGAAAGAAGCCGCCAAGGCAGCTG
GAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCTGAACCTTCAACTAATCCTTCTCGATCTTGCAGGATCAAACCCGTTGTTACTTATAGAGCAAGAAAGAGG
AGCCCTAAGAAAAATGTGCCTGAAAAACCGCTTGGGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCGGATGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGC
TCTTGCGATTGCTGAGGGATATAAGGCTGAACAAGATGCTTTAAAAGAGATTGAGGATGAGAGAGAGATGGAAAACCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAAG
AAAGAGACCGTGAAGAAGAGAAAAGAATGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGCAAGAAAATATGACGAAAACCTCAGGAGGGCAGGC
ATGGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGGGAAGAAATAAAAGAAAACGAAAAGAGAAGGAAGGAAGCTGAAGACTTCCTAGAGCCTTTGAGCCACTCCAT
AAGGCTCAAAGTGAAGCTGAAGCACTGCAAGGAAGGAGAAGTAGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCATTGATC
AGCCAGCTGAAGAGGTTCTTGAGCCTCTATTCACGAATGAACCACCAGCAGCTGATAGCACCTCTTCGAGAGAGAAGAGGGACGAAGATGAAAAGGAAGATGAGGAGGCC
AGAACCTTCACTAACTCTGATACAGAATCTGATTCGGAGATAAGGGAACTAGATGGCGACCAAGTCCCTATCTCTGCAGCGTTTAGAAGAAAGAGAAAGAGAGAGATAAA
GGACGAGAGAAGGACAAAGAACAAGAATGACCCAATATTTGCCAAGAGGCCGAGGATGAGGTCCATGGACGCCTCTTCTACAGATCCTCCTACTACCTCACCCGCCAAGC
CAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCGTTCCCTGACGAGCACTGCCATAATTCGAAAACAAGAGTTATCTTCCAGTACAAGTGGCAGGACTTCTGT
GCTCACCCTCAGGAGGCTATTGTGCTTCTAGTTCGAGAGTTTTACGCCGTCCTGAGGGAGGAAAGTATTAGCATGGCGGTGGTGAGGGGGAAGATGGGGGTTCAGTGGAA
AGAATCACAGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGTCAGAATCGGCAGTTTGGCTTCACTTCATCAAGAACCGCTTGATGCCAACCACCAACGACAGCA
CGATTTCAATGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGCGTCACTTCTTCAAGCCGACCATCGACCTGTCC
CTGATTGGAAAGCTCCAACAGAACAACATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCCTGTAGGGCCAAATGTAGCTTCTCCATCCCAACACACTCC
TTTCACAGGGCCTTCGACATCATCAGAGGCCCTAGCTTTTGCCTACCGCCAACTAGATCAAATCAGGGAGAACCTGAGGACTTATTGGGCGTATGCAAAGGAGAGGGATG
AAGCTATTAGAGAGTTCTATCTCTCTATTGCTCCGAGTATTGCTCCGGTCTTTCCAAATTTCCCTCAGTCGCTGCTACCTCCGGAAGAGAAGGATTCTGATGAAGATGGT
GAAGAGAAAGAGAGTTCCTCAGACGAGGAATAG
Protein sequenceShow/hide protein sequence
MTHNRTLLTVEHFCVHGYRPIPDTPARMSPTWTPWINTSVSNTKRAVSHSVIRIRGLFIGAETDLSCCPRRTASRRYVTTSRQVFLEQKLSQRRDATRTGSRRYRDSGIF
FAACLASRRSGPSFEGDAEFVFAAVHQTQKPAAQQFKKRSWEWFAMIREMGAQRPALEEEGNRQDEKEAAKAAGSSRQGEASMGKVSEPSTNPSRSCRIKPVVTYRARKR
SPKKNVPEKPLGVKPLKTARMPPDVFEGIIRQAVAKALAIAEGYKAEQDALKEIEDEREMENQKMVEEDELAKERDREEEKRMREEEQEAERALEAEEARKYDENLRRAG
MDLQLLEEEKKRREEIKENEKRRKEAEDFLEPLSHSIRLKVKLKHCKEGEVEAQNATASGPHSEEGLAEATIDQPAEEVLEPLFTNEPPAADSTSSREKRDEDEKEDEEA
RTFTNSDTESDSEIRELDGDQVPISAAFRRKRKREIKDERRTKNKNDPIFAKRPRMRSMDASSTDPPTTSPAKPKGKSPKAASPKNPFPDEHCHNSKTRVIFQYKWQDFC
AHPQEAIVLLVREFYAVLREESISMAVVRGKMGVQWKESQTKVKSLVPSDLKSESAVWLHFIKNRLMPTTNDSTISMDRVMLLYCLMKGVKIVPGKDEERHFFKPTIDLS
LIGKLQQNNIQRKDKASTSQATPPVGPNVASPSQHTPFTGPSTSSEALAFAYRQLDQIRENLRTYWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPPEEKDSDEDG
EEKESSSDEE