; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004449 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004449
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold9:11290025..11293025
RNA-Seq ExpressionSpg004449
SyntenySpg004449
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.4e-15392.41Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSPVT K VALFGKKPA  PKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-15392.74Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSPVT K VA+FGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]3.2e-15392.74Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSPVT K VALFGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]7.2e-15392.08Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLS SGASARSA SASSPVT K VA+FGKKPAAAPKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV+A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]3.5e-15593.4Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSP TFKTVALFGKKPAA  KPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AVIA
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic2.1e-15090.76Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSF   S+RSAPS S+P TFKTVALFGKKPAA  KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AVIA
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic8.1e-15090.76Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFS  SA   PSASSP TFKTVALFGKKPAA  KPKP+  SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AVIA
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic3.1e-14990.76Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSF G S RSAPSASS VT KTVALFGKKPAA  KP  +AVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AVIA
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic1.6e-15392.74Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLSFSGASARSA SASSPVT K VALFGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic3.5e-15392.08Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE
        MASLAASTAAASLGVSEMLRNPLS SGASARSA SASSPVT K VA+FGKKPAAAPKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEE

Query:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA
                   V   YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLI AV+A
Subjt:  SAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIA

Query:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV
        EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERV
Subjt:  EVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERV

Query:  PTL
        PTL
Subjt:  PTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic1.0e-5348.51Show/hide
Query:  SGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSK
        S   AR+APS SS + F    +  +K AA PKP  S+ SP       WYG DR ++L  G L   E P YL GE                YG+D  GLS 
Subjt:  SGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSK

Query:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIINGLNFE--
         PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YRI  G   E  
Subjt:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIINGLNFE--

Query:  DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P12331 Chlorophyll a-b binding protein 2, chloroplastic8.3e-5145.93Show/hide
Query:  ASSPVTFKTVALFGKKPA------------AAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGL
        A++ +   + AL GK  A            +A KPKP+A        + WYG DR ++L  G L   E P YL GE                YG+D  GL
Subjt:  ASSPVTFKTVALFGKKPA------------AAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGL

Query:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIINGLNFE
        S  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YRI  G   E
Subjt:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIINGLNFE

Query:  --DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
          D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  --DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic8.3e-5145.32Show/hide
Query:  SEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHS
        S M  +  +F+G  A + PS+     F    +  +K AA  KP  S+ SP       WYGPDR ++L  G L   E P YL GE                
Subjt:  SEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHS

Query:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYR
        YG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YR
Subjt:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYR

Query:  IINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        +  G   E  D L+PGG FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  IINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.0e-5250.22Show/hide
Query:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWF
        ++YGPDR  FL  G    ++ PEYL GE                YG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  +++      E VWF
Subjt:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWF

Query:  KTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYF
        K GA +     LNY GN   I   ++IA +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEIKNGRLAMF+ LGF+ 
Subjt:  KTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYF

Query:  QAYVTGEGPVENLAKHLSDPFGN
        QA VTG+GPV+NL  HL+DP  N
Subjt:  QAYVTGEGPVENLAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic2.8e-13180.55Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFY
        ASLGVSEML  PL+F   S  SAP ASSP TFKTVALF KK  A  K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE           
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFY

Query:  LVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEY
         V   YGYDPFGL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL+ AV+AEVVL+GGAEY
Subjt:  LVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEY

Query:  YRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        YRI NGL+FEDKLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  YRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 36.1e-4942.55Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV
        +  S M  +  +F+G +   +P+AS  +    V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE             
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV

Query:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE
           YG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E
Subjt:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE

Query:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 26.1e-4942.55Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV
        +  S M  +  +F+G +   +P+AS  +    V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE             
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV

Query:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE
           YG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E
Subjt:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE

Query:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 13.6e-4942.55Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV
        +  S M  +  +F+G + + +P+AS  +    V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE             
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLV

Query:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE
           YG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E
Subjt:  NHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAE

Query:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  YYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G34420.1 photosystem II light harvesting complex gene B1B23.0e-4842.54Show/hide
Query:  ASSPVTFKTVALFGK--KPAAAP-------KPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSKK
        ASS +   + A  GK  KPAA+          + +   P     + WYG DR  +L        E P YL GE                YG+D  GLS  
Subjt:  ASSPVTFKTVALFGK--KPAAAP-------KPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFYLVNHSYGYDPFGLSKK

Query:  PEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIING---LNFE
        PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E YR+         E
Subjt:  PEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIAAVIAEVVLVGGAEYYRIING---LNFE

Query:  DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        D L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 52.0e-13280.55Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFY
        ASLGVSEML  PL+F   S  SAP ASSP TFKTVALF KK  A  K K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE           
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFY

Query:  LVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEY
         V   YGYDPFGL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL+ AV+AEVVL+GGAEY
Subjt:  LVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEY

Query:  YRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        YRI NGL+FEDKLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  YRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTGGCAGCCTCCACCGCAGCCGCCTCGCTCGGCGTCTCCGAAATGCTCAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCCGCTCCCTCTGCTTC
TAGCCCGGTCACCTTCAAGACCGTTGCGCTCTTCGGGAAGAAGCCGGCTGCCGCTCCCAAGCCGAAGCCCTCCGCCGTCTCTCCGGCCAACGACGAGCTCGCCAAGTGGT
ATGGTCCCGACAGAAGGATTTTCTTGCCTGATGGGCTGTTGGACCGATCCGAGATCCCGGAGTACTTGAATGGCGAGGAATCGGCCAAACTCAAACGACATTGTTTTTAT
TTGGTGAATCACAGCTACGGTTACGACCCCTTTGGACTCAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAGTTGATTCATGCACGATGGGCCATGCTTGG
AGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTTGGTGCTAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGA
ATTACTTTGGAAACAACATTCCCATCAACCTCATTGCCGCCGTCATTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAG
GACAAGCTTCACCCGGGAGGGCCGTTCGACCCGTTGGGGCTGGCGGACGACCCGGACCAGGCGGCGATCTTGAAGGTGAAGGAGATAAAGAATGGAAGATTGGCAATGTT
TGCAATGCTAGGGTTTTACTTCCAAGCTTACGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGCGATCCTTTTGGAAACAACTTGCTCACAGTCATTT
CTGGGAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTGGCAGCCTCCACCGCAGCCGCCTCGCTCGGCGTCTCCGAAATGCTCAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCCGCTCCCTCTGCTTC
TAGCCCGGTCACCTTCAAGACCGTTGCGCTCTTCGGGAAGAAGCCGGCTGCCGCTCCCAAGCCGAAGCCCTCCGCCGTCTCTCCGGCCAACGACGAGCTCGCCAAGTGGT
ATGGTCCCGACAGAAGGATTTTCTTGCCTGATGGGCTGTTGGACCGATCCGAGATCCCGGAGTACTTGAATGGCGAGGAATCGGCCAAACTCAAACGACATTGTTTTTAT
TTGGTGAATCACAGCTACGGTTACGACCCCTTTGGACTCAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAGTTGATTCATGCACGATGGGCCATGCTTGG
AGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTTGGTGCTAACTGCGGCCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGA
ATTACTTTGGAAACAACATTCCCATCAACCTCATTGCCGCCGTCATTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAG
GACAAGCTTCACCCGGGAGGGCCGTTCGACCCGTTGGGGCTGGCGGACGACCCGGACCAGGCGGCGATCTTGAAGGTGAAGGAGATAAAGAATGGAAGATTGGCAATGTT
TGCAATGCTAGGGTTTTACTTCCAAGCTTACGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGCGATCCTTTTGGAAACAACTTGCTCACAGTCATTT
CTGGGAATGCTGAAAGAGTTCCAACTCTTTAA
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSGASARSAPSASSPVTFKTVALFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEESAKLKRHCFY
LVNHSYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIAAVIAEVVLVGGAEYYRIINGLNFE
DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL