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Spg004467 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004467
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 15-like
Genome locationscaffold9:10833359..10835917
RNA-Seq ExpressionSpg004467
SyntenySpg004467
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]7.7e-4065.13Show/hide
Query:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN--------GKGKKV-G
        MAF +N   D S STFNPSLM A+S QGL  +E +KQR CV CR TRTPLWR GPAGPRSLCNACGIRY+K+K   NN G + N        GKGKK+ G
Subjt:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN--------GKGKKV-G

Query:  GGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY
        GGSLK+RV+  GREI++HR   T M +NGVAESIGEEEQ AAMLL+ALSS Y
Subjt:  GGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY

XP_008451515.1 PREDICTED: GATA transcription factor 15-like [Cucumis melo]2.2e-3963.46Show/hide
Query:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN------------GKGK
        MAF +N   D S STFNPSLM A+S QGL  +E +KQR CV CR TRTPLWR GPAGPRSLCNACGIRY+K+K   NN G + N            GKGK
Subjt:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN------------GKGK

Query:  KV-GGGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY
        K+ GGGSLK+RV+  GREI++HR   T M +NGVAESIGEEEQ AAMLL+ALSS Y
Subjt:  KV-GGGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]1.1e-4677.86Show/hide
Query:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF
        MAFF+ NHPDLSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWR GPAGPRSLCNACGIRY+KLKN NGGV K+  GKKV      VRV+G 
Subjt:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF

Query:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY
        GREI+LHRAT  MAENG AE+IGEEEQAAAMLL+ALSS Y
Subjt:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]1.1e-4677.14Show/hide
Query:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK-NNGGVIKNGKGKKVGGGSLKVRVMGF
        MAFF+ NHPDLSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWR GPAGPRSLCNACGIRY+KLK NNGGV K+G GKKV      VRV+G 
Subjt:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK-NNGGVIKNGKGKKVGGGSLKVRVMGF

Query:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY
        GREI+LHR T  MAENG AE+IGEEEQAAAMLL+ALSS Y
Subjt:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]2.5e-4677.14Show/hide
Query:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF
        MAFF+ NHPDLSGSTFNP SLMAIS+ GL+ IEPQKQR C  CRTTRTPLWR GPAGPRSLCNACGIRY+KLKN NGGV K+G GKKV      VRV+  
Subjt:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF

Query:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY
        GREI+LHRAT  MAENG AE+IGEEEQAAAMLL+ALSS Y
Subjt:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY

TrEMBL top hitse value%identityAlignment
A0A0A0K6B1 GATA-type domain-containing protein2.4e-3965.79Show/hide
Query:  MAFFVNH-PDLSGSTFN-PSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK----NNGGVIKN-----GKGKKVG--
        +AF +N   DLS STFN PSLM A+S +GL+ +E +KQR CV CR TRTPLWR GPAGPRSLCNACGIRY+K+K    NNGGV  N     GKGKK+G  
Subjt:  MAFFVNH-PDLSGSTFN-PSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK----NNGGVIKN-----GKGKKVG--

Query:  GGSLKVRVMGFGREIVLHRATTMAE--NGVAESIGEEEQAAAMLLVALSSSY
        GGSLKVRV+  GREI++HR TT  E  N VAESIGEEEQ AA+LL+ALSS Y
Subjt:  GGSLKVRVMGFGREIVLHRATTMAE--NGVAESIGEEEQAAAMLLVALSSSY

A0A1S3BSR7 GATA transcription factor 15-like1.1e-3963.46Show/hide
Query:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN------------GKGK
        MAF +N   D S STFNPSLM A+S QGL  +E +KQR CV CR TRTPLWR GPAGPRSLCNACGIRY+K+K   NN G + N            GKGK
Subjt:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN------------GKGK

Query:  KV-GGGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY
        K+ GGGSLK+RV+  GREI++HR   T M +NGVAESIGEEEQ AAMLL+ALSS Y
Subjt:  KV-GGGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY

A0A5A7TUD0 GATA transcription factor 15-like3.7e-4065.13Show/hide
Query:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN--------GKGKKV-G
        MAF +N   D S STFNPSLM A+S QGL  +E +KQR CV CR TRTPLWR GPAGPRSLCNACGIRY+K+K   NN G + N        GKGKK+ G
Subjt:  MAFFVNH-PDLSGSTFNPSLM-AISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK---NNGGVIKN--------GKGKKV-G

Query:  GGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY
        GGSLK+RV+  GREI++HR   T M +NGVAESIGEEEQ AAMLL+ALSS Y
Subjt:  GGSLKVRVMGFGREIVLHR--ATTMAENGVAESIGEEEQAAAMLLVALSSSY

A0A6J1H9M3 GATA transcription factor 15-like5.4e-4777.86Show/hide
Query:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF
        MAFF+ NHPDLSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWR GPAGPRSLCNACGIRY+KLKN NGGV K+  GKKV      VRV+G 
Subjt:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKN-NGGVIKNGKGKKVGGGSLKVRVMGF

Query:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY
        GREI+LHRAT  MAENG AE+IGEEEQAAAMLL+ALSS Y
Subjt:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY

A0A6J1KR45 GATA transcription factor 15-like5.4e-4777.14Show/hide
Query:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK-NNGGVIKNGKGKKVGGGSLKVRVMGF
        MAFF+ NHPDLSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWR GPAGPRSLCNACGIRY+KLK NNGGV K+G GKKV      VRV+G 
Subjt:  MAFFV-NHPDLSGSTFNP-SLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK-NNGGVIKNGKGKKVGGGSLKVRVMGF

Query:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY
        GREI+LHR T  MAENG AE+IGEEEQAAAMLL+ALSS Y
Subjt:  GREIVLHRAT-TMAENGVAESIGEEEQAAAMLLVALSSSY

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 213.9e-1072.22Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK
        RVC DC TT+TPLWR GP GP+SLCNACGIR +K +
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.7e-1062.22Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNG
        RVC DC TT+TPLWR GP GP+SLCNACGIR +K +       NG
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNG

Q8LG10 GATA transcription factor 151.1e-1549.53Show/hide
Query:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAAA
        +++ C  C T++TPLWR GPAGP+SLCNACGIR +K    L +N    K  K        G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA
Subjt:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAAA

Query:  MLLVALS
        +LL+ALS
Subjt:  MLLVALS

Q9FJ10 GATA transcription factor 163.4e-1449.07Show/hide
Query:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAA
        K++ C DC T++TPLWR GP GP+SLCNACGIR +K K  GG   N K KK   GGG      SLK  +M  G   +  R+T   +    + +GEEEQ A
Subjt:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAA

Query:  AMLLVALS
        A+LL+ALS
Subjt:  AMLLVALS

Q9SZI6 Putative GATA transcription factor 225.1e-1069.44Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK
        R+C DC TT+TPLWR GP GP+SLCNACGIR +K +
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 157.5e-1749.53Show/hide
Query:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAAA
        +++ C  C T++TPLWR GPAGP+SLCNACGIR +K    L +N    K  K        G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA
Subjt:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAAA

Query:  MLLVALS
        +LL+ALS
Subjt:  MLLVALS

AT4G26150.1 cytokinin-responsive gata factor 13.6e-1169.44Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK
        R+C DC TT+TPLWR GP GP+SLCNACGIR +K +
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK

AT4G36620.1 GATA transcription factor 198.0e-1155.56Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKKVGGGS
        R C +C TT TPLWR GP GP+SLCNACGIR+KK +      +N      GGGS
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKKVGGGS

AT5G49300.1 GATA transcription factor 162.4e-1549.07Show/hide
Query:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAA
        K++ C DC T++TPLWR GP GP+SLCNACGIR +K K  GG   N K KK   GGG      SLK  +M  G   +  R+T   +    + +GEEEQ A
Subjt:  KQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATTMAENGVAESIGEEEQAA

Query:  AMLLVALS
        A+LL+ALS
Subjt:  AMLLVALS

AT5G56860.1 GATA type zinc finger transcription factor family protein2.8e-1172.22Show/hide
Query:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK
        RVC DC TT+TPLWR GP GP+SLCNACGIR +K +
Subjt:  RVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTTCGTGAACCACCCCGATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCGAGCCAGGGTCTAGTCGGTATCGAGCCTCAGAAACAGAGGGT
CTGCGTCGACTGTCGCACCACCAGAACCCCCCTTTGGAGAATCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCATGTGGGATAAGATACAAGAAGCTAAAGAACAATG
GTGGAGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTACACAGAGCGACGACGATGGCG
GAAAATGGAGTTGCAGAGTCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTCGTGGCTTTATCTTCCAGCTATGACAAGGAACCCATGTTGTCCAAATTCAAAGG
AGAAAACTCACGGTGGAAAAAGCTTGCAATCGCGTTAGGTTGTCGTCAGAGTTCGAAGGAAGAAGAAGACTGCCGCTACCGAGCCCATTCGCGTGAACACACCTCCACTG
GAAGCTTGCTACACGCCGAAGATCGTCGCTGGAGACGGAGAAGTGTGCTGACCGACAATCGTTTCAGATCTGATCTTTCTAGACATGATGGGTCTTTGATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTTCGTGAACCACCCCGATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCGAGCCAGGGTCTAGTCGGTATCGAGCCTCAGAAACAGAGGGT
CTGCGTCGACTGTCGCACCACCAGAACCCCCCTTTGGAGAATCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCATGTGGGATAAGATACAAGAAGCTAAAGAACAATG
GTGGAGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTACACAGAGCGACGACGATGGCG
GAAAATGGAGTTGCAGAGTCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTCGTGGCTTTATCTTCCAGCTATGACAAGGAACCCATGTTGTCCAAATTCAAAGG
AGAAAACTCACGGTGGAAAAAGCTTGCAATCGCGTTAGGTTGTCGTCAGAGTTCGAAGGAAGAAGAAGACTGCCGCTACCGAGCCCATTCGCGTGAACACACCTCCACTG
GAAGCTTGCTACACGCCGAAGATCGTCGCTGGAGACGGAGAAGTGTGCTGACCGACAATCGTTTCAGATCTGATCTTTCTAGACATGATGGGTCTTTGATCTAG
Protein sequenceShow/hide protein sequence
MAFFVNHPDLSGSTFNPSLMAISSQGLVGIEPQKQRVCVDCRTTRTPLWRIGPAGPRSLCNACGIRYKKLKNNGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRATTMA
ENGVAESIGEEEQAAAMLLVALSSSYDKEPMLSKFKGENSRWKKLAIALGCRQSSKEEEDCRYRAHSREHTSTGSLLHAEDRRWRRRSVLTDNRFRSDLSRHDGSLI