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Spg004469 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004469
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold9:9065740..9067755
RNA-Seq ExpressionSpg004469
SyntenySpg004469
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]4.2e-1129.34Show/hide
Query:  KKTWAMKQRQFPCEAVVPLVREFYPG-LREESMSMAVVRGKMVSFSSVDINRVYRIK---------------EPLHPRGNDAIKNPLAKQMKEALKVVAN
        K+ W ++  + P  AV  +V+EFY   L  E  +   VR   V FS  DIN  Y +K               E +  RG    K      +K+ +K + N
Subjt:  KKTWAMKQRQFPCEAVVPLVREFYPG-LREESMSMAVVRGKMVSFSSVDINRVYRIK---------------EPLHPRGNDAIKNPLAKQMKEALKVVAN

Query:  -KGNRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-------DLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTL
           + L+PT+H+ T+S ER+ +LY I+KG +IN+  +I ++I  C  +  GKLFF   I       ++P++    ++   RK   S     P      T 
Subjt:  -KGNRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-------DLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTL

Query:  PPQHTPFSRPSPSSEALATAYQQLDQIRDNLRTYWAYAKERD
        P   T  +   P  E L+       Q+ + L+T+W Y +ERD
Subjt:  PPQHTPFSRPSPSSEALATAYQQLDQIRDNLRTYWAYAKERD

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.4e-0827.85Show/hide
Query:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------
        P + +VPLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N     +   L+ VA  G                         
Subjt:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------

Query:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN
             + L+PTTH  T+S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I         P L+ + + +N    D  + ++ T      
Subjt:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN

Query:  PTLPPQHTPFSRPSPSSEA
        PT   Q    SRP+ +S +
Subjt:  PTLPPQHTPFSRPSPSSEA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.9e-1326.95Show/hide
Query:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------
        P + +VPLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N   + +   L+ VA  G                         
Subjt:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------

Query:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN
             +RL+PTTH  T+S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I         P L+ + + +N    D  + ++        
Subjt:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN

Query:  PTLPPQHTPFSRPSPSSEALATA--YQQLDQIRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKG
        PT   Q    SRP+ +S         QQL  +   L                     + +WAY+KERD A+++   +      P FP FPQ +L   +  
Subjt:  PTLPPQHTPFSRPSPSSEALATA--YQQLDQIRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKG

Query:  SEDEEDDE
         E E D +
Subjt:  SEDEEDDE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.2e-0830.13Show/hide
Query:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPL--HPRGNDAIKNPLAKQMKEALKVVANKGN----------------------
        P + +VPLVREFY  +         +RG  V  S   IN ++ + +P+  H    + I  P    + E + +V  + N                      
Subjt:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPL--HPRGNDAIKNPLAKQMKEALKVVANKGN----------------------

Query:  -----RLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFF
             RL+PTTH  T+S E V LLYS++ G  IN+  +I  +I +C  +K+G LFF
Subjt:  -----RLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFF

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.3e-1427.59Show/hide
Query:  VPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG------------------------------
        +PLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N    ++   L+ VA  G                              
Subjt:  VPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG------------------------------

Query:  NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-----DLP-LIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQH
        +RL+PTTH   +S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I     + P L+ + + +N    D  + ++ T      PT   Q 
Subjt:  NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-----DLP-LIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQH

Query:  TPFSRPSPSS------------EALATAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKGSEDEEDDE
           SRP+ +S            +AL     Q +      + +WAY+KERD A+++   +      P FP FPQ +L   +   E E D +
Subjt:  TPFSRPSPSS------------EALATAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKGSEDEEDDE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.1e-0827.85Show/hide
Query:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------
        P + +VPLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N     +   L+ VA  G                         
Subjt:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------

Query:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN
             + L+PTTH  T+S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I         P L+ + + +N    D  + ++ T      
Subjt:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN

Query:  PTLPPQHTPFSRPSPSSEA
        PT   Q    SRP+ +S +
Subjt:  PTLPPQHTPFSRPSPSSEA

A0A2P5BCG4 Uncharacterized protein (Fragment)2.9e-1326.95Show/hide
Query:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------
        P + +VPLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N   + +   L+ VA  G                         
Subjt:  PCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG-------------------------

Query:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN
             +RL+PTTH  T+S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I         P L+ + + +N    D  + ++        
Subjt:  -----NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTID-------LP-LIGKFQQNNAQRKDKASTSQATPPSGLN

Query:  PTLPPQHTPFSRPSPSSEALATA--YQQLDQIRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKG
        PT   Q    SRP+ +S         QQL  +   L                     + +WAY+KERD A+++   +      P FP FPQ +L   +  
Subjt:  PTLPPQHTPFSRPSPSSEALATA--YQQLDQIRDNL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKG

Query:  SEDEEDDE
         E E D +
Subjt:  SEDEEDDE

A0A2P5DXM3 Uncharacterized protein2.6e-1427.59Show/hide
Query:  VPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG------------------------------
        +PLVREFY  L +   +   VRG  VS+S   IN V+ + +P+    ++ I+N    ++   L+ VA  G                              
Subjt:  VPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKG------------------------------

Query:  NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-----DLP-LIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQH
        +RL+PTTH   +S +R++LL+S++ G  IN+  +I  +I +C  +K G LFF   I     + P L+ + + +N    D  + ++ T      PT   Q 
Subjt:  NRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-----DLP-LIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQH

Query:  TPFSRPSPSS------------EALATAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKGSEDEEDDE
           SRP+ +S            +AL     Q +      + +WAY+KERD A+++   +      P FP FPQ +L   +   E E D +
Subjt:  TPFSRPSPSS------------EALATAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEEKGSEDEEDDE

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I2.3e-0724.91Show/hide
Query:  KQRQFPCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKGNRLMPTTHNITISVERVMLL
        K  + P      LV+ FY  + E +  + +       ++   ++R    +E L PR         AK     +K      ++L+PT+HN T+S +R+  L
Subjt:  KQRQFPCEAVVPLVREFYPGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKGNRLMPTTHNITISVERVMLL

Query:  YSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTIDLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQHTPFSRPSPSSEALATAYQQLDQIRDN
        +SI+ G  I+I  II E++ +C  + A  L       +P++   ++   + KD+ ++  A  P              ++P    E +    +Q++Q+ D 
Subjt:  YSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTIDLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQHTPFSRPSPSSEALATAYQQLDQIRDN

Query:  LRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEE--KGSEDEEDDEEDERESSSDEE
        + TY++Y K RDE +   ++ I P      P FP +LL   E  +  ED      +E    +DEE
Subjt:  LRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEE--KGSEDEEDDEEDERESSSDEE

A0A7J6FZ22 Uncharacterized protein2.1e-1129.34Show/hide
Query:  KKTWAMKQRQFPCEAVVPLVREFYPG-LREESMSMAVVRGKMVSFSSVDINRVYRIK---------------EPLHPRGNDAIKNPLAKQMKEALKVVAN
        K+ W ++  + P  AV  +V+EFY   L  E  +   VR   V FS  DIN  Y +K               E +  RG    K      +K+ +K + N
Subjt:  KKTWAMKQRQFPCEAVVPLVREFYPG-LREESMSMAVVRGKMVSFSSVDINRVYRIK---------------EPLHPRGNDAIKNPLAKQMKEALKVVAN

Query:  -KGNRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-------DLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTL
           + L+PT+H+ T+S ER+ +LY I+KG +IN+  +I ++I  C  +  GKLFF   I       ++P++    ++   RK   S     P      T 
Subjt:  -KGNRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAGKLFFGPTI-------DLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTL

Query:  PPQHTPFSRPSPSSEALATAYQQLDQIRDNLRTYWAYAKERD
        P   T  +   P  E L+       Q+ + L+T+W Y +ERD
Subjt:  PPQHTPFSRPSPSSEALATAYQQLDQIRDNLRTYWAYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGGCTAACAAGGCTTTTGCTGCGGCAACCGCATGCGTTCGTAGTTCCACATGTGTTACCTGTCAAGGATTTATCATGTTGCTACCGCATCCGGTTGGCCATGCG
GGAGTTAGCTGAGGAGGCTGGCTTCTCCAAGAAATTGGCTTGCGTGCCCCAGTTATCTTTCTCCAGCTTGCACATCAGTCACACGTCAGCGCGATCATCTCTTCCAGCTT
TCAGTGTACGAACTGCTCTGGGATCTACACCTGCACTGAAGAAAACTTGGGCAATGAAGCAACGACAATTTCCATGTGAGGCCGTGGTGCCTCTAGTTAGAGAATTCTAC
CCTGGTTTAAGGGAGGAGAGCATGAGTATGGCAGTGGTGAGAGGCAAGATGGTCAGCTTCTCGTCTGTGGACATCAACAGGGTGTACAGAATCAAGGAACCCTTGCATCC
AAGAGGGAACGATGCCATTAAGAACCCCTTGGCCAAACAAATGAAAGAAGCGCTAAAAGTGGTGGCCAACAAGGGAAACAGATTGATGCCAACAACCCACAACATCACTA
TTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATCATGAAGGGGTTGGAAATCAACATCAGGAGCATTATCAGGGAGAAGATCCTTTCCTGTGGAATGAAGAAAGCAGGG
AAGCTTTTCTTTGGGCCTACCATTGATCTACCTCTGATTGGGAAGTTCCAACAGAACAACGCCCAAAGAAAAGACAAAGCTTCCACATCTCAAGCCACTCCACCATCAGG
GTTGAATCCGACTTTACCACCTCAACACACTCCTTTTTCAAGGCCCTCACCATCATCTGAAGCTCTAGCAACTGCCTACCAACAACTGGATCAAATCAGGGACAACCTGA
GGACTTACTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATTGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCTCAATCGCTGCTG
CCTCAAGAAGAAAAGGGTTCTGAAGATGAAGAAGATGATGAAGAAGATGAAAGAGAGAGTTCCTCGGATGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGGCTAACAAGGCTTTTGCTGCGGCAACCGCATGCGTTCGTAGTTCCACATGTGTTACCTGTCAAGGATTTATCATGTTGCTACCGCATCCGGTTGGCCATGCG
GGAGTTAGCTGAGGAGGCTGGCTTCTCCAAGAAATTGGCTTGCGTGCCCCAGTTATCTTTCTCCAGCTTGCACATCAGTCACACGTCAGCGCGATCATCTCTTCCAGCTT
TCAGTGTACGAACTGCTCTGGGATCTACACCTGCACTGAAGAAAACTTGGGCAATGAAGCAACGACAATTTCCATGTGAGGCCGTGGTGCCTCTAGTTAGAGAATTCTAC
CCTGGTTTAAGGGAGGAGAGCATGAGTATGGCAGTGGTGAGAGGCAAGATGGTCAGCTTCTCGTCTGTGGACATCAACAGGGTGTACAGAATCAAGGAACCCTTGCATCC
AAGAGGGAACGATGCCATTAAGAACCCCTTGGCCAAACAAATGAAAGAAGCGCTAAAAGTGGTGGCCAACAAGGGAAACAGATTGATGCCAACAACCCACAACATCACTA
TTTCAGTAGAGAGAGTTATGCTCCTCTACAGTATCATGAAGGGGTTGGAAATCAACATCAGGAGCATTATCAGGGAGAAGATCCTTTCCTGTGGAATGAAGAAAGCAGGG
AAGCTTTTCTTTGGGCCTACCATTGATCTACCTCTGATTGGGAAGTTCCAACAGAACAACGCCCAAAGAAAAGACAAAGCTTCCACATCTCAAGCCACTCCACCATCAGG
GTTGAATCCGACTTTACCACCTCAACACACTCCTTTTTCAAGGCCCTCACCATCATCTGAAGCTCTAGCAACTGCCTACCAACAACTGGATCAAATCAGGGACAACCTGA
GGACTTACTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCTCTCTATTGCCCCGAGTATTGCTCCTGTCTTTCCTGATTTCCCTCAATCGCTGCTG
CCTCAAGAAGAAAAGGGTTCTGAAGATGAAGAAGATGATGAAGAAGATGAAAGAGAGAGTTCCTCGGATGAGGAATAG
Protein sequenceShow/hide protein sequence
MTRLTRLLLRQPHAFVVPHVLPVKDLSCCYRIRLAMRELAEEAGFSKKLACVPQLSFSSLHISHTSARSSLPAFSVRTALGSTPALKKTWAMKQRQFPCEAVVPLVREFY
PGLREESMSMAVVRGKMVSFSSVDINRVYRIKEPLHPRGNDAIKNPLAKQMKEALKVVANKGNRLMPTTHNITISVERVMLLYSIMKGLEINIRSIIREKILSCGMKKAG
KLFFGPTIDLPLIGKFQQNNAQRKDKASTSQATPPSGLNPTLPPQHTPFSRPSPSSEALATAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLL
PQEEKGSEDEEDDEEDERESSSDEE