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Spg004479 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004479
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold9:10791473..10792771
RNA-Seq ExpressionSpg004479
SyntenySpg004479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]9.6e-1232.47Show/hide
Query:  NRFINNLARAKY-VEMLRRDFLFERGFDDDLPRFLRTGIVNHG--WSQFCAKPDPVNSNIVREFYANIDDH-EGFQ----AIWRLSKTEKRTFQATYLKS
        ++FI+  A  +Y   ++ +  + ERG +  +  +     + H   W QFC +PD     +VREFYAN+ +H +G      A W+ S  E  +F+ + +K 
Subjt:  NRFINNLARAKY-VEMLRRDFLFERGFDDDLPRFLRTGIVNHG--WSQFCAKPDPVNSNIVREFYANIDDH-EGFQ----AIWRLSKTEKRTFQATYLKS

Query:  EANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQ---LHSSR
        E   W+ F+  RLL +TH S V++DR +L +AI+   SID+ + +    LH+ R
Subjt:  EANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQ---LHSSR

EXB89644.1 hypothetical protein L484_018745 [Morus notabilis]1.7e-0827.71Show/hide
Query:  PRLPYN--RFINNLARAKYVEMLR-RDFLFERGFD---DDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANI----------------DDHEGFQA
        P + Y+  RF++  A  +Y    + R  + ERGF+   + LP  +   I +  W +FC++P   +  +VREF+ N                 D H   +A
Subjt:  PRLPYN--RFINNLARAKYVEMLR-RDFLFERGFD---DDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANI----------------DDHEGFQA

Query:  I------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI
        +      W +    +  F+A YL +  N W+ F+  RL+P+TH S V+ +R L+  AI R   +++
Subjt:  I------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]8.4e-0825.51Show/hide
Query:  FINNLARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANID------------------------------
        F++  A+  Y  +  R   FE GF      + +L   +   +  H W +F   P PVN+ IV+EFY+NI                               
Subjt:  FINNLARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANID------------------------------

Query:  -----------DHEGFQAI----------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQLHS
                   DHE +Q I          W   + +++T     L      W  F+K +L+PT+H++TVS  R+LL  +IL   +IDI + +  H+
Subjt:  -----------DHEGFQAI----------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQLHS

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]1.7e-0828.29Show/hide
Query:  ARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANIDD--------------------HEGFQAIWRLSKTE
        A  +Y  +  R   FE GF      D DL   +   +  H W +F   P  VN+ +V+EFY+NI +                    +  F+  W   +  
Subjt:  ARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANIDD--------------------HEGFQAIWRLSKTE

Query:  KRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI
        ++T     L      W  F+K +LLPT+H++TVS  R++L  +I+  ++IDI
Subjt:  KRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.9e-0823.37Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFDDD-------LPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFDDD-------LPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEGF-------------------QAIWRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI---------
           +D+H  F                    A W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI++         
Subjt:  ---IDDHEGF-------------------QAIWRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI---------

Query:  ------------------------------------------------------------------------------------------QEQLQLH-SS
                                                                                                  QE  Q H  S
Subjt:  ------------------------------------------------------------------------------------------QEQLQLH-SS

Query:  RMEFAERQFQTFWNYVKRRHAALKGALQSNFSKPYPAFPIFPDDLLYPWIPPPPFEREGDEEEDPGQE
         ++   +Q Q FW Y K R  ALK ALQ+NF++P P FP FP ++L        +E E + ++D   E
Subjt:  RMEFAERQFQTFWNYVKRRHAALKGALQSNFSKPYPAFPIFPDDLLYPWIPPPPFEREGDEEEDPGQE

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein4.6e-1232.47Show/hide
Query:  NRFINNLARAKY-VEMLRRDFLFERGFDDDLPRFLRTGIVNHG--WSQFCAKPDPVNSNIVREFYANIDDH-EGFQ----AIWRLSKTEKRTFQATYLKS
        ++FI+  A  +Y   ++ +  + ERG +  +  +     + H   W QFC +PD     +VREFYAN+ +H +G      A W+ S  E  +F+ + +K 
Subjt:  NRFINNLARAKY-VEMLRRDFLFERGFDDDLPRFLRTGIVNHG--WSQFCAKPDPVNSNIVREFYANIDDH-EGFQ----AIWRLSKTEKRTFQATYLKS

Query:  EANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQ---LHSSR
        E   W+ F+  RLL +TH S V++DR +L +AI+   SID+ + +    LH+ R
Subjt:  EANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQ---LHSSR

A0A2P5BCG4 Uncharacterized protein (Fragment)2.4e-0823.37Show/hide
Query:  RFINNLARAKYVEMLR-RDFLFERGFDDD-------LPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYAN-----------------------------
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H W QFCA P+     +VREFYAN                             
Subjt:  RFINNLARAKYVEMLR-RDFLFERGFDDD-------LPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYAN-----------------------------

Query:  ---IDDHEGF-------------------QAIWRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI---------
           +D+H  F                    A W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI++         
Subjt:  ---IDDHEGF-------------------QAIWRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI---------

Query:  ------------------------------------------------------------------------------------------QEQLQLH-SS
                                                                                                  QE  Q H  S
Subjt:  ------------------------------------------------------------------------------------------QEQLQLH-SS

Query:  RMEFAERQFQTFWNYVKRRHAALKGALQSNFSKPYPAFPIFPDDLLYPWIPPPPFEREGDEEEDPGQE
         ++   +Q Q FW Y K R  ALK ALQ+NF++P P FP FP ++L        +E E + ++D   E
Subjt:  RMEFAERQFQTFWNYVKRRHAALKGALQSNFSKPYPAFPIFPDDLLYPWIPPPPFEREGDEEEDPGQE

A0A6A2ZUE4 Uncharacterized protein4.1e-0825.51Show/hide
Query:  FINNLARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANID------------------------------
        F++  A+  Y  +  R   FE GF      + +L   +   +  H W +F   P PVN+ IV+EFY+NI                               
Subjt:  FINNLARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANID------------------------------

Query:  -----------DHEGFQAI----------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQLHS
                   DHE +Q I          W   + +++T     L      W  F+K +L+PT+H++TVS  R+LL  +IL   +IDI + +  H+
Subjt:  -----------DHEGFQAI----------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDIQEQLQLHS

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein8.2e-0928.29Show/hide
Query:  ARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANIDD--------------------HEGFQAIWRLSKTE
        A  +Y  +  R   FE GF      D DL   +   +  H W +F   P  VN+ +V+EFY+NI +                    +  F+  W   +  
Subjt:  ARAKYVEMLRRDFLFERGF------DDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANIDD--------------------HEGFQAIWRLSKTE

Query:  KRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI
        ++T     L      W  F+K +LLPT+H++TVS  R++L  +I+  ++IDI
Subjt:  KRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI

W9S5G5 Uncharacterized protein8.2e-0927.71Show/hide
Query:  PRLPYN--RFINNLARAKYVEMLR-RDFLFERGFD---DDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANI----------------DDHEGFQA
        P + Y+  RF++  A  +Y    + R  + ERGF+   + LP  +   I +  W +FC++P   +  +VREF+ N                 D H   +A
Subjt:  PRLPYN--RFINNLARAKYVEMLR-RDFLFERGFD---DDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANI----------------DDHEGFQA

Query:  I------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI
        +      W +    +  F+A YL +  N W+ F+  RL+P+TH S V+ +R L+  AI R   +++
Subjt:  I------WRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGGTGCCCCGTCGTCGCTGTCAGAAGCAAAAAGCCGACCGTGTCAAGGTAGTCCGGACTGATACCCCTTCACCTCCGACAACTGATTCTGAGAGAGAGAATGC
AGAGAGAGAAGAACAAGAGAAAAAGGAAGCCGAGGACAAAGCAAGAGAGGAAGCGGCGAAAAAGGTTGAGGAAGATAATTTGCCCAAACAAAGGGAAGACAGGGGCAAAG
GTATTGTTGAAGCATCGCCGGAGCCTGAAGATAGTAAAACAGAGGAGCCACGGTTACCGTACAATCGCTTCATCAACAATCTTGCCAGAGCAAAGTATGTCGAGATGCTG
AGAAGAGACTTTTTGTTTGAACGAGGATTTGACGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCATGGCTGGAGTCAATTCTGTGCAAAGCCAGACCCGGT
CAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCATGAGGGATTTCAGGCTATCTGGAGACTATCGAAGACGGAGAAGCGCACATTTCAAGCTACTTATC
TGAAGAGTGAGGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTACTGCCAACAACTCACGATTCAACGGTGTCTCGAGACCGGGTACTGCTTGCGTTTGCTATTCTT
CGTTCGATGAGTATTGATATACAGGAGCAATTACAGCTGCATTCTAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGCATGC
CGCACTAAAGGGGGCCCTACAATCGAATTTTTCAAAACCATATCCAGCCTTCCCGATATTCCCTGATGATCTGTTATACCCTTGGATTCCGCCGCCGCCTTTTGAGAGAG
AAGGGGATGAAGAAGAAGATCCTGGTCAGGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGGTGCCCCGTCGTCGCTGTCAGAAGCAAAAAGCCGACCGTGTCAAGGTAGTCCGGACTGATACCCCTTCACCTCCGACAACTGATTCTGAGAGAGAGAATGC
AGAGAGAGAAGAACAAGAGAAAAAGGAAGCCGAGGACAAAGCAAGAGAGGAAGCGGCGAAAAAGGTTGAGGAAGATAATTTGCCCAAACAAAGGGAAGACAGGGGCAAAG
GTATTGTTGAAGCATCGCCGGAGCCTGAAGATAGTAAAACAGAGGAGCCACGGTTACCGTACAATCGCTTCATCAACAATCTTGCCAGAGCAAAGTATGTCGAGATGCTG
AGAAGAGACTTTTTGTTTGAACGAGGATTTGACGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCATGGCTGGAGTCAATTCTGTGCAAAGCCAGACCCGGT
CAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCATGAGGGATTTCAGGCTATCTGGAGACTATCGAAGACGGAGAAGCGCACATTTCAAGCTACTTATC
TGAAGAGTGAGGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTACTGCCAACAACTCACGATTCAACGGTGTCTCGAGACCGGGTACTGCTTGCGTTTGCTATTCTT
CGTTCGATGAGTATTGATATACAGGAGCAATTACAGCTGCATTCTAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGCATGC
CGCACTAAAGGGGGCCCTACAATCGAATTTTTCAAAACCATATCCAGCCTTCCCGATATTCCCTGATGATCTGTTATACCCTTGGATTCCGCCGCCGCCTTTTGAGAGAG
AAGGGGATGAAGAAGAAGATCCTGGTCAGGAAGACTGA
Protein sequenceShow/hide protein sequence
MPEVPRRRCQKQKADRVKVVRTDTPSPPTTDSERENAEREEQEKKEAEDKAREEAAKKVEEDNLPKQREDRGKGIVEASPEPEDSKTEEPRLPYNRFINNLARAKYVEML
RRDFLFERGFDDDLPRFLRTGIVNHGWSQFCAKPDPVNSNIVREFYANIDDHEGFQAIWRLSKTEKRTFQATYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAIL
RSMSIDIQEQLQLHSSRMEFAERQFQTFWNYVKRRHAALKGALQSNFSKPYPAFPIFPDDLLYPWIPPPPFEREGDEEEDPGQED