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Spg004490 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004490
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:11011724..11022036
RNA-Seq ExpressionSpg004490
SyntenySpg004490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]2.7e-1136.25Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEARQG
        F+K +L+PT+H++TVS  R LL  +I+ S  IDVG II  ++  C  KK   L FPN IT LC+K  V EN  D IL        P L+   R +     
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEARQG

Query:  GLVNGIHK--IVEQLA----------LSASRQEFVERQS---------LTFWSYVKRRDA
        G+ N  +K  I EQ A          L A  +  ++ Q+           F+ YVK RDA
Subjt:  GLVNGIHK--IVEQLA----------LSASRQEFVERQS---------LTFWSYVKRRDA

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.0e-1146.88Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQE
        F+K  LLPTTH  TVS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR   TQE
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.8e-1534.52Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQR---TQEA
        F+K RLLPTTH  TVS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR  +   T+  
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQR---TQEA

Query:  RQ---------------GGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK
        +Q               G ++  +  + ++L+    +Q       +   +Q   FW+Y K RD +LKK
Subjt:  RQ---------------GGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]6.8e-1534.71Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEAR--
        F+K RLLPTTH  TVS++R LL +++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR   TQE +  
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEAR--

Query:  ------------------QGGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK
                           G ++  +  + ++L+    +Q       +   +Q   FW+Y K RD +LKK
Subjt:  ------------------QGGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.0e-1538.85Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARF------QRT
        F+K RLLPTTH   VS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A    N+    L + G ID   +AR       + T
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARF------QRT

Query:  QE-------ARQGGLVNG-IHKIVEQLALSASRQEFVERQSLTFWSYVKRRDASLKK
        Q+       A      NG + + ++ L    S+QE   +Q   FW+Y K RD +LKK
Subjt:  QE-------ARQGGLVNG-IHKIVEQLALSASRQEFVERQSLTFWSYVKRRDASLKK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.9e-1246.88Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQE
        F+K  LLPTTH  TVS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR   TQE
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)3.3e-1534.52Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQR---TQEA
        F+K RLLPTTH  TVS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR  +   T+  
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQR---TQEA

Query:  RQ---------------GGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK
        +Q               G ++  +  + ++L+    +Q       +   +Q   FW+Y K RD +LKK
Subjt:  RQ---------------GGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK

A0A2P5CEY2 Uncharacterized protein3.3e-1534.71Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEAR--
        F+K RLLPTTH  TVS++R LL +++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR   TQE +  
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEAR--

Query:  ------------------QGGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK
                           G ++  +  + ++L+    +Q       +   +Q   FW+Y K RD +LKK
Subjt:  ------------------QGGLVNGIHKIVEQLALSASRQ-------EFVERQSLTFWSYVKRRDASLKK

A0A2P5DXM3 Uncharacterized protein5.1e-1638.85Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARF------QRT
        F+K RLLPTTH   VS++R LL  ++L   SI+VG +I SEI  C  +K G LFFP+ IT LC+ A    N+    L + G ID   +AR       + T
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARF------QRT

Query:  QE-------ARQGGLVNG-IHKIVEQLALSASRQEFVERQSLTFWSYVKRRDASLKK
        Q+       A      NG + + ++ L    S+QE   +Q   FW+Y K RD +LKK
Subjt:  QE-------ARQGGLVNG-IHKIVEQLALSASRQEFVERQSLTFWSYVKRRDASLKK

A0A6A2Y697 Reverse transcriptase domain-containing protein1.3e-1136.25Show/hide
Query:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEARQG
        F+K +L+PT+H++TVS  R LL  +I+ S  IDVG II  ++  C  KK   L FPN IT LC+K  V EN  D IL        P L+   R +     
Subjt:  FIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEARQG

Query:  GLVNGIHK--IVEQLA----------LSASRQEFVERQS---------LTFWSYVKRRDA
        G+ N  +K  I EQ A          L A  +  ++ Q+           F+ YVK RDA
Subjt:  GLVNGIHK--IVEQLA----------LSASRQEFVERQS---------LTFWSYVKRRDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCATCAAACAGAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGCTCTTCTGGCTTTCGCGATTTTAAGGTCTCTCAGTATTGATGTGGG
TAATATTATTGCGAGTGAGATATCTGGATGCTGGAGGAAGAAGGTTGGGAAGTTGTTTTTCCCAAATACAATTACAATGCTTTGCAAGAAAGCAGGGGTTCCGGAGAATG
ATGGAGATGTTATATTGTTTGACAAGGGAATCATTGACACGCCTAACTTGGCACGGTTTCAGCGTACGCAAGAAGCACGTCAGGGTGGGCTTGTTAATGGCATTCACAAG
ATTGTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTTGTTGAGAGGCAATCTCTAACTTTCTGGAGCTATGTTAAACGTCGTGATGCCAGCCTGAAGAAGCCGAA
TAGAGGAGAGAGATTGGAGACCAACAAGATGACCATCAATTGCAAGCTGATCAAGGGAATTAATATTTTCTTGTATTACTTTGTAGTTATGGATGCATTTACTTATATTG
TAACTCGCCGCCGCCGTCGACACGCCGCCGCTGCCCTGCTCGTGGTTGTCGCGCTGCCGCCGTCTGAAGCCGTGCAACAAGCCGCCGCGTGGTCCTTCTTCCCCCGCAAG
CTCTCCCTTCGCGAGATCTCCCTCCGCGCCGTCTTCCCCAGTCGCGCGTCCCTCCCTCTTCGCGCAAGCTCTCTCCCTCTCGCTGCGATCTCTCTCCCTCACTCGGCGTT
CGCGTGGTGTTCGTCCAGCCGCAGCTGCCGTTCAGTGCCACCGTCGCGTGGGTCCCCTCATTCCCGCGCTGTTCCCTCTCTGTTTCGTGGTTCAAGGTGCAGATCTCTCG
TTCCCTTGCATTTTCGGCCAAGAAAAACTCGTGGCACCTCGAAGCACCGTCTTCTCCGCATTCCGACTGTAGAAGTCTTGGGTAAGCTCTTGTTCCTCTCATTCTTTGAT
GAAATAAGGGCGCTCCGTGTGGTAAGTTTATGCTTTACCCACTCTTGGTTGAAGCTTAAATTTGATTACCCATTAGCTTTAGGTGCTGAAAAGTTTAATGGTGTTCGATT
TTCTGATCTGCAGCGCCGTCAAAGTGATCGATTGGGTTCGAAACGCTTTAATTCGAATACCCACTGCCCAAGGACTATTCTAGCGCATCCGGCTGAAAAGCCTTATCTGG
AGCCGTTTGGCGAACACCCATTGCCCGTTTTCGAGGTGCTTGTGGAGCTTGGTGCAAGTGTCGCCTCGGTAATTAGAAGTGATTTGTGCGAAGCGTGGCGCGTTTTGCGT
AGCGTGGCGCGTAATGCACGTGTAAGGTTTTGCATAGCATGGCGCGTAATGCATGCGATTGGTTTGCGCAACATGGCGCGTATCGAGGATGATCTAGACCTTGGTGGCGA
GGAGGAGAACTGCGAAGAAATATTCCTAGAGAGTTGCTTTCTGTTGTTATGTTTTGTAATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCATCAAACAGAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGCTCTTCTGGCTTTCGCGATTTTAAGGTCTCTCAGTATTGATGTGGG
TAATATTATTGCGAGTGAGATATCTGGATGCTGGAGGAAGAAGGTTGGGAAGTTGTTTTTCCCAAATACAATTACAATGCTTTGCAAGAAAGCAGGGGTTCCGGAGAATG
ATGGAGATGTTATATTGTTTGACAAGGGAATCATTGACACGCCTAACTTGGCACGGTTTCAGCGTACGCAAGAAGCACGTCAGGGTGGGCTTGTTAATGGCATTCACAAG
ATTGTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTTGTTGAGAGGCAATCTCTAACTTTCTGGAGCTATGTTAAACGTCGTGATGCCAGCCTGAAGAAGCCGAA
TAGAGGAGAGAGATTGGAGACCAACAAGATGACCATCAATTGCAAGCTGATCAAGGGAATTAATATTTTCTTGTATTACTTTGTAGTTATGGATGCATTTACTTATATTG
TAACTCGCCGCCGCCGTCGACACGCCGCCGCTGCCCTGCTCGTGGTTGTCGCGCTGCCGCCGTCTGAAGCCGTGCAACAAGCCGCCGCGTGGTCCTTCTTCCCCCGCAAG
CTCTCCCTTCGCGAGATCTCCCTCCGCGCCGTCTTCCCCAGTCGCGCGTCCCTCCCTCTTCGCGCAAGCTCTCTCCCTCTCGCTGCGATCTCTCTCCCTCACTCGGCGTT
CGCGTGGTGTTCGTCCAGCCGCAGCTGCCGTTCAGTGCCACCGTCGCGTGGGTCCCCTCATTCCCGCGCTGTTCCCTCTCTGTTTCGTGGTTCAAGGTGCAGATCTCTCG
TTCCCTTGCATTTTCGGCCAAGAAAAACTCGTGGCACCTCGAAGCACCGTCTTCTCCGCATTCCGACTGTAGAAGTCTTGGGTAAGCTCTTGTTCCTCTCATTCTTTGAT
GAAATAAGGGCGCTCCGTGTGGTAAGTTTATGCTTTACCCACTCTTGGTTGAAGCTTAAATTTGATTACCCATTAGCTTTAGGTGCTGAAAAGTTTAATGGTGTTCGATT
TTCTGATCTGCAGCGCCGTCAAAGTGATCGATTGGGTTCGAAACGCTTTAATTCGAATACCCACTGCCCAAGGACTATTCTAGCGCATCCGGCTGAAAAGCCTTATCTGG
AGCCGTTTGGCGAACACCCATTGCCCGTTTTCGAGGTGCTTGTGGAGCTTGGTGCAAGTGTCGCCTCGGTAATTAGAAGTGATTTGTGCGAAGCGTGGCGCGTTTTGCGT
AGCGTGGCGCGTAATGCACGTGTAAGGTTTTGCATAGCATGGCGCGTAATGCATGCGATTGGTTTGCGCAACATGGCGCGTATCGAGGATGATCTAGACCTTGGTGGCGA
GGAGGAGAACTGCGAAGAAATATTCCTAGAGAGTTGCTTTCTGTTGTTATGTTTTGTAATGCTTTAG
Protein sequenceShow/hide protein sequence
MGFIKQRLLPTTHDSTVSRERALLAFAILRSLSIDVGNIIASEISGCWRKKVGKLFFPNTITMLCKKAGVPENDGDVILFDKGIIDTPNLARFQRTQEARQGGLVNGIHK
IVEQLALSASRQEFVERQSLTFWSYVKRRDASLKKPNRGERLETNKMTINCKLIKGINIFLYYFVVMDAFTYIVTRRRRRHAAAALLVVVALPPSEAVQQAAAWSFFPRK
LSLREISLRAVFPSRASLPLRASSLPLAAISLPHSAFAWCSSSRSCRSVPPSRGSPHSRAVPSLFRGSRCRSLVPLHFRPRKTRGTSKHRLLRIPTVEVLGKLLFLSFFD
EIRALRVVSLCFTHSWLKLKFDYPLALGAEKFNGVRFSDLQRRQSDRLGSKRFNSNTHCPRTILAHPAEKPYLEPFGEHPLPVFEVLVELGASVASVIRSDLCEAWRVLR
SVARNARVRFCIAWRVMHAIGLRNMARIEDDLDLGGEEENCEEIFLESCFLLLCFVML