; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004491 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004491
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProteasome subunit beta
Genome locationscaffold9:9657277..9664266
RNA-Seq ExpressionSpg004491
SyntenySpg004491
Gene Ontology termsGO:0010498 - proteasomal protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0019774 - proteasome core complex, beta-subunit complex (cellular component)
GO:0004298 - threonine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131817.1 proteasome subunit beta type-5 [Momordica charantia]6.8e-0781.58Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME+LEGFSA PSFEIPNS+D
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
XP_022961789.1 proteasome subunit beta type-5-like [Cucurbita moschata]1.5e-0678.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME +EGF+A PSFEIPNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
XP_023002169.1 proteasome subunit beta type-5-B isoform X1 [Cucurbita maxima]1.2e-0678.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQT+A LFG KME+LEGFSA PSFE+PNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
XP_023538613.1 proteasome subunit beta type-5-B isoform X1 [Cucurbita pepo subsp. pepo]1.2e-0678.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQT+A LFG KME+LEGFSA PSFE+PNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
XP_038883961.1 proteasome subunit beta type-5 isoform X1 [Benincasa hispida]1.2e-0681.58Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME LEGF+A PSFEIPNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
TrEMBL top hitse value%identityAlignment
A0A5A7VGZ1 Proteasome subunit beta2.1e-0676.32Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA +FG +ME LEGF+A PSFEIPNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
A0A6J1BS30 Proteasome subunit beta3.3e-0781.58Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME+LEGFSA PSFEIPNS+D
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
A0A6J1HF19 Proteasome subunit beta7.3e-0778.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME +EGF+A PSFEIPNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
A0A6J1KAW4 Proteasome subunit beta7.3e-0778.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQTTA LFG KME +EGF+A PSFEIPNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
A0A6J1KPP5 Proteasome subunit beta5.6e-0778.95Show/hide
Query:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGLQT+A LFG KME+LEGFSA PSFE+PNSSD
Subjt:  VELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSD
SwissProt top hitse value%identityAlignment
Q9LIP2 Proteasome subunit beta type-5-B4.3e-0452.5Show/hide
Query:  VELDTSGLQTT--ALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGL+TT   + FG   EML+GFS+ PSF++P ++D
Subjt:  VELDTSGLQTT--ALLFGQKMEMLEGFSAVPSFEIPNSSD
Arabidopsis top hitse value%identityAlignment
AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein3.0e-0552.5Show/hide
Query:  VELDTSGLQTT--ALLFGQKMEMLEGFSAVPSFEIPNSSD
        ++LDTSGL+TT   + FG   EML+GFS+ PSF++P ++D
Subjt:  VELDTSGLQTT--ALLFGQKMEMLEGFSAVPSFEIPNSSD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGATCGAATTTCTGCCCAACGAGCGTCGTCGTCGCCTCTCTCCGTCAGACTCTATGATCTCTCTTCTACACCTTCTCCAGCCGTTGTGGCCACTGTTGACGC
CACAGCTCCTCCAGCCACCGGCGCACGCAACGACAATAGTTGGGGTCTCCTCCTTCGGCGTGTATGTGTGAGTTCTGCAGCGATTCGACATGATTCCGACAACTCCTCTT
TGTGGACAGCAGCTCTCCTTCAAGTTGCAATGATTTTGAGTTGTGGGGTGAGATCGTTATTGGATAAAAGTAAGGAAGGGGCAGATCACAAAAATCTTAGAGGAAAAGGT
AGTCCAACTGCTGCTTCTGTCATCTTTCCCCTCATTCTTCGATCACCATCTCCGGCGACTGCAACCCTGAGGCCCCGATTGACCACGCAGCAGCGACGGCGTGTTCTCGC
GAATAGAACTAGCTCAGTCATCGACATAGTTGAGCTCGATACCAGTGGTCTTCAAACAACTGCTCTGCTGTTTGGGCAAAAAATGGAGATGCTGGAAGGGTTTTCTGCTG
TTCCATCCTTTGAGATCCCTAATTCCAGTGACGTAATTTTTATGGTTGTATTGATTTTTTTAATCCTCCTTTTCTATGCTTCAGATTTGTCTGCCGAGGCTGTGCTGACT
GTGTTACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGAGATCGAATTTCTGCCCAACGAGCGTCGTCGTCGCCTCTCTCCGTCAGACTCTATGATCTCTCTTCTACACCTTCTCCAGCCGTTGTGGCCACTGTTGACGC
CACAGCTCCTCCAGCCACCGGCGCACGCAACGACAATAGTTGGGGTCTCCTCCTTCGGCGTGTATGTGTGAGTTCTGCAGCGATTCGACATGATTCCGACAACTCCTCTT
TGTGGACAGCAGCTCTCCTTCAAGTTGCAATGATTTTGAGTTGTGGGGTGAGATCGTTATTGGATAAAAGTAAGGAAGGGGCAGATCACAAAAATCTTAGAGGAAAAGGT
AGTCCAACTGCTGCTTCTGTCATCTTTCCCCTCATTCTTCGATCACCATCTCCGGCGACTGCAACCCTGAGGCCCCGATTGACCACGCAGCAGCGACGGCGTGTTCTCGC
GAATAGAACTAGCTCAGTCATCGACATAGTTGAGCTCGATACCAGTGGTCTTCAAACAACTGCTCTGCTGTTTGGGCAAAAAATGGAGATGCTGGAAGGGTTTTCTGCTG
TTCCATCCTTTGAGATCCCTAATTCCAGTGACGTAATTTTTATGGTTGTATTGATTTTTTTAATCCTCCTTTTCTATGCTTCAGATTTGTCTGCCGAGGCTGTGCTGACT
GTGTTACGATAG
Protein sequenceShow/hide protein sequence
MSRDRISAQRASSSPLSVRLYDLSSTPSPAVVATVDATAPPATGARNDNSWGLLLRRVCVSSAAIRHDSDNSSLWTAALLQVAMILSCGVRSLLDKSKEGADHKNLRGKG
SPTAASVIFPLILRSPSPATATLRPRLTTQQRRRVLANRTSSVIDIVELDTSGLQTTALLFGQKMEMLEGFSAVPSFEIPNSSDVIFMVVLIFLILLFYASDLSAEAVLT
VLR