; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004535 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004535
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-binding protein 24 isoform X1
Genome locationscaffold9:10272168..10276211
RNA-Seq ExpressionSpg004535
SyntenySpg004535
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592286.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-14991.16Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT       GGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMY TGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GI+SGAAAAAAAFYPYFQFGEGSGGGANGF+ GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022157230.1 RNA-binding protein 24 isoform X1 [Momordica charantia]4.3e-15093.58Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT      GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GIM+GAAAAAAAFYPYFQFGEGS GGG NGF+AGSGQQ GYGVQYPHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022930178.1 RNA-binding protein 38 isoform X1 [Cucurbita moschata]2.5e-15091.84Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT      GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GI+SGAAAAAAAFYPYFQFGEGSGGGANGF+ GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_023523843.1 probable RNA-binding protein ARP1 isoform X1 [Cucurbita pepo subsp. pepo]8.0e-14990.88Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL GQFGDTTYTK+FVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLG+QRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STP H+KKKWEL GGGGGGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMY TGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGS--GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        G+MSG    AAAFYPYFQFGEGS  GGGANGFSAGSGQQGYGVQYPHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL  PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGS--GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_023535742.1 RNA-binding protein 38-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-14991.16Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT        GGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GI+SGAAAAAAAFYPYFQFGEGSGGGANGF+ GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A6J1DSJ0 RNA-binding protein 24 isoform X12.1e-15093.58Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT      GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GIM+GAAAAAAAFYPYFQFGEGS GGG NGF+AGSGQQ GYGVQYPHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1EUB1 RNA-binding protein 38 isoform X11.2e-15091.84Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT      GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GI+SGAAAAAAAFYPYFQFGEGSGGGANGF+ GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1F1U2 probable RNA-binding protein ARP1 isoform X12.6e-14590.54Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL GQFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELT-GGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGP
        STP HEKKKWEL  GGGGGGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFP YAV QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMY TGP
Subjt:  STPKHEKKKWELT-GGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGP

Query:  GGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GG+MSG    AAAFYPYFQFGEGS GGGANGFSAGSGQQGYG QYPHHLFQYSA INSTATT PQHY GPPMSLP TPPTLPSGVTMAL  PIPHR
Subjt:  GGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1ID05 probable RNA-binding protein ARP1 isoform X12.0e-14590.2Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL  QFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STP HEKKKWEL     GGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYNLYGYSSYSPD+TYPT SYYNVYGGATAQYP+Y TGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGS--GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        G+MSG    AAAFYPYFQFGEGS  GGGANGFS GSGQQGYGVQYPHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL APIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGS--GGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1IGG9 RNA-binding protein 38 isoform X11.2e-15091.84Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELT      GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPT SYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPG

Query:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GI+SGAAAAAAAFYPYFQFGEGSGGGANGF+ GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  GIMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 387.1e-2338.1Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGS---AFHSTP--TFPHYAVQQG-------IPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGP
                            S QTGF   V     AF   P    PHY   Q        IP  +   +S   DYT  +Q+Y      A  QYP   +  
Subjt:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGS---AFHSTP--TFPHYAVQQG-------IPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGP

Query:  GGIM--------------SGAAAAAAAFYPY
         G +              S  AA A AF  Y
Subjt:  GGIM--------------SGAAAAAAAFYPY

Q62176 RNA-binding protein 387.6e-2558.51Show/hide
Query:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        P+ + G   DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9H0Z9 RNA-binding protein 387.6e-2558.51Show/hide
Query:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        P  + G   DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9I8B3 RNA-binding protein 24-B1.6e-2236.89Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASL-------------GVQRS
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA L             GVQ+ 
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASL-------------GVQRS

Query:  KPS-------TPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQ
         P+        P H          G            +    QT          +++  +  YA      Y+ Y Y++      Y T + Y    G    
Subjt:  KPS-------TPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQ

Query:  YPMYGTGPGGIMSGAAAAAAAFYPY
         P+    PG     AAAAAAAF  Y
Subjt:  YPMYGTGPGGIMSGAAAAAAAFYPY

Q9M1S3 Probable RNA-binding protein ARP12.6e-2536.59Show/hide
Query:  TPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS
        T  N+ G FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++ +AA RAC D+ P+I+GRRANCNLASLG +  K  
Subjt:  TPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS

Query:  TPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGG
        T    ++        G   G       V +  Q  +     +  H           Q +P+  YGY S    Y  P  ++    G     Y M G     
Subjt:  TPKHEKKKWELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGG

Query:  IMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPP
             +     +Y +  +    GGG     A S    +   YP+H         S A  FPQ     P+S   TPP
Subjt:  IMSGAAAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.2e-5953.02Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA
                GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY+    + Y +YG  +  QY +YG     GG ++ A
Subjt:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA

Query:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL-------PPTPPTLP
        AA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+       P  PP +P
Subjt:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-5954.51Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA
                GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY+    + Y +YG  +  QY +YG     GG ++ A
Subjt:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA

Query:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL
        AA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+
Subjt:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.1e-5851.93Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA
                GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY+    + Y +YG  +  QY +YG     GG ++ A
Subjt:  ELTGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGAT-AQYPMYG--TGPGGIMSGA

Query:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPI
        AA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+        S  T +   P+
Subjt:  AAAAAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-7057.35Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGGIMSGAAAA-
                G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPTQSYYNVYGGATAQ+PMYG+GP   M+G AAA 
Subjt:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGGIMSGAAAA-

Query:  AAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP
        AA FYPY QF EG+ G   G++         + YP+H+F YSA        +P H+ G P+SL P+ P +PS V  A+P
Subjt:  AAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-6856.99Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGGIMSGAAAA-
                G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG+GP   M+G AAA 
Subjt:  LTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGGIMSGAAAA-

Query:  AAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP
        AA FYPY QF EG+ G   G++         + YP+H+F YSA        +P H+ G P+SL P+ P +PS V  A+P
Subjt:  AAAFYPYFQFGEGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCAGCTAACTTGGCAGGCCAGTTTGGGGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATACTTCGA
ACAGTTCGGCGACATCTTGGAAGCCGTCGTTATTACCGACAAGGCCACCGGTCGATCCAAAGGCTATGGATTTGTCACTTTCCGCGAACCGGAGGCCGCGATGAGGGCTT
GCGTCGATGCTGCTCCGGTCATCGACGGCCGGAGGGCCAACTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCTAAACCCTCCACGCCCAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGGGGAGGTGGTGGTGGTGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTC
AACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGCAGAGCTACTACAATG
TGTACGGCGGGGCAACTGCACAGTACCCTATGTACGGTACCGGACCCGGCGGCATAATGAGCGGTGCGGCGGCGGCGGCAGCGGCGTTCTACCCGTATTTCCAATTCGGA
GAAGGAAGCGGCGGAGGAGCTAACGGCTTCAGTGCCGGTTCCGGGCAGCAGGGGTATGGGGTTCAGTACCCGCACCATCTATTTCAGTACTCGGCCGCCATTAATTCAAC
TGCGACGACGTTCCCTCAGCACTATGCTGGTCCTCCCATGTCTCTGCCACCCACGCCTCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCCCACATC
GCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCAGCTAACTTGGCAGGCCAGTTTGGGGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATACTTCGA
ACAGTTCGGCGACATCTTGGAAGCCGTCGTTATTACCGACAAGGCCACCGGTCGATCCAAAGGCTATGGATTTGTCACTTTCCGCGAACCGGAGGCCGCGATGAGGGCTT
GCGTCGATGCTGCTCCGGTCATCGACGGCCGGAGGGCCAACTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCTAAACCCTCCACGCCCAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGGGGAGGTGGTGGTGGTGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTC
AACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGCAGAGCTACTACAATG
TGTACGGCGGGGCAACTGCACAGTACCCTATGTACGGTACCGGACCCGGCGGCATAATGAGCGGTGCGGCGGCGGCGGCAGCGGCGTTCTACCCGTATTTCCAATTCGGA
GAAGGAAGCGGCGGAGGAGCTAACGGCTTCAGTGCCGGTTCCGGGCAGCAGGGGTATGGGGTTCAGTACCCGCACCATCTATTTCAGTACTCGGCCGCCATTAATTCAAC
TGCGACGACGTTCCCTCAGCACTATGCTGGTCCTCCCATGTCTCTGCCACCCACGCCTCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCCCACATC
GCTAA
Protein sequenceShow/hide protein sequence
MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
ELTGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTQSYYNVYGGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQFG
EGSGGGANGFSAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR