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Spg004543 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004543
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:12063436..12067944
RNA-Seq ExpressionSpg004543
SyntenySpg004543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601663.1 hypothetical protein SDJN03_06896, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0743.75Show/hide
Query:  SGSFEHFRSRPNPV-RVGMMHESRSMLQGKCILDRCEIEVRDLKCERKESWVSVSAPRVQMVEGWHVTIGLRGASRPWVQMVKGRCDESRKQVLGA
        S SFEH  ++   +  +  +   R+ L+  C    CE +VR L    KES V +  PRV++VEG ++ IGLRGASRPWV+MVKG   ES +  +GA
Subjt:  SGSFEHFRSRPNPV-RVGMMHESRSMLQGKCILDRCEIEVRDLKCERKESWVSVSAPRVQMVEGWHVTIGLRGASRPWVQMVKGRCDESRKQVLGA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAGTAGCAGTCAAGGTAGTGGACGTTCTGGCCCTCCAGACGTTCCCGAGATAGCTCCTAAGGTGGGGAGTCAGCATACCCCTCGCTCAAGGTTTAAGCTGAC
GTTAGCAGCTTGTGTTCCTTCAAGTGACATTGTTAAAAGCGAGCCTCATGTGTGTTGTGCTAAAGCAGATAGCTTAGCTCCAACTTTGCTAGTGAAGTTGGCTTTTTTGA
TACACATGGCTAAGTATCCTGTAGATCGTGCAAGACCCGAGTTCGGATTGGATTTTGTCCGACCTTTTGAGCTGTTTATGCACTTGGTCAAGTTGCCTCCTTTAAAGCTC
GTGGGTAGCAGTTCGGGGTCCCGTCATTCGCGATTTCGCTTCTGTCCAGTGGTGTTCGACCCCGTTTTGGCTCATGGCGACGTCGTTCAGCGTTTTCGAATTGAGTGTCA
AATTCCTAACCTTTTGAGAGCCATTGATTGTAATTCAGGCTCATTCGAGCACTTTCGATCAAGACCCAATCCCGTAAGGGTGGGCATGATGCATGAGTCTAGAAGCATGT
TGCAGGGCAAATGCATTCTAGATAGATGTGAGATAGAGGTCAGGGACCTAAAGTGTGAAAGAAAGGAAAGTTGGGTGAGTGTCAGTGCACCTCGGGTACAAATGGTCGAG
GGGTGGCACGTCACCATTGGTTTAAGAGGAGCATCGAGACCTTGGGTACAAATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTGTTGGGCGCCTGGGGAAGGGC
CAATACTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGTCGAACGCCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTG
CGACTCGAAGGATCAGTCTTGGAGAGCCATGGGCTGCTTACCAGTACCTTAGTGTACTGACCCCCTCCCTTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGAC
TGCGTGGACCATGGTGATGCGGAGGAGGCATATGAGGAAGGGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAGTAGCAGTCAAGGTAGTGGACGTTCTGGCCCTCCAGACGTTCCCGAGATAGCTCCTAAGGTGGGGAGTCAGCATACCCCTCGCTCAAGGTTTAAGCTGAC
GTTAGCAGCTTGTGTTCCTTCAAGTGACATTGTTAAAAGCGAGCCTCATGTGTGTTGTGCTAAAGCAGATAGCTTAGCTCCAACTTTGCTAGTGAAGTTGGCTTTTTTGA
TACACATGGCTAAGTATCCTGTAGATCGTGCAAGACCCGAGTTCGGATTGGATTTTGTCCGACCTTTTGAGCTGTTTATGCACTTGGTCAAGTTGCCTCCTTTAAAGCTC
GTGGGTAGCAGTTCGGGGTCCCGTCATTCGCGATTTCGCTTCTGTCCAGTGGTGTTCGACCCCGTTTTGGCTCATGGCGACGTCGTTCAGCGTTTTCGAATTGAGTGTCA
AATTCCTAACCTTTTGAGAGCCATTGATTGTAATTCAGGCTCATTCGAGCACTTTCGATCAAGACCCAATCCCGTAAGGGTGGGCATGATGCATGAGTCTAGAAGCATGT
TGCAGGGCAAATGCATTCTAGATAGATGTGAGATAGAGGTCAGGGACCTAAAGTGTGAAAGAAAGGAAAGTTGGGTGAGTGTCAGTGCACCTCGGGTACAAATGGTCGAG
GGGTGGCACGTCACCATTGGTTTAAGAGGAGCATCGAGACCTTGGGTACAAATGGTCAAGGGTCGGTGTGATGAGTCTAGAAAGCAAGTGTTGGGCGCCTGGGGAAGGGC
CAATACTTTGCTAAGTCATCGGTGCGCCTTGGGTACAAATGGTCAAGGGTCGAACGCCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTG
CGACTCGAAGGATCAGTCTTGGAGAGCCATGGGCTGCTTACCAGTACCTTAGTGTACTGACCCCCTCCCTTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGAC
TGCGTGGACCATGGTGATGCGGAGGAGGCATATGAGGAAGGGCCCTAG
Protein sequenceShow/hide protein sequence
MSSSSSQGSGRSGPPDVPEIAPKVGSQHTPRSRFKLTLAACVPSSDIVKSEPHVCCAKADSLAPTLLVKLAFLIHMAKYPVDRARPEFGLDFVRPFELFMHLVKLPPLKL
VGSSSGSRHSRFRFCPVVFDPVLAHGDVVQRFRIECQIPNLLRAIDCNSGSFEHFRSRPNPVRVGMMHESRSMLQGKCILDRCEIEVRDLKCERKESWVSVSAPRVQMVE
GWHVTIGLRGASRPWVQMVKGRCDESRKQVLGAWGRANTLLSHRCALGTNGQGSNAELRREHCGPGYKWSGDSATRRISLGEPWAAYQYLSVLTPSLLSPQLPDFAGYED
CVDHGDAEEAYEEGP