; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004547 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004547
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold9:13352220..13356603
RNA-Seq ExpressionSpg004547
SyntenySpg004547
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026036.1 uncharacterized protein E6C27_scaffold581G00210 [Cucumis melo var. makuwa]1.3e-1529.32Show/hide
Query:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------
        K+ +YL+E ++ L+   I  L  PKP                KF  + G DN GK I +   G+  S   + SQS+++D H KRPK+ +K S        
Subjt:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------

Query:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH
                       S L D +++  G   P   VSP++  S++    NFK+ +      S  P+ ++  P++++       SE+S++C D++IS+ +R 
Subjt:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH

Query:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
          + +WE + QKI+RT  +++  LE E  KIF AI  + +++L  L+EL
Subjt:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]3.4e-1631.97Show/hide
Query:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEP-----GEFRSKDNDSSQSSSNDHHWKRPKKFNK--------------------PSS
        K+G Y E++   LV S I  P +P+ PK  G + GGK IR+ E       E   +  D S +S +D HWKRP K  K                    P S
Subjt:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEP-----GEFRSKDNDSSQSSSNDHHWKRPKKFNK--------------------PSS

Query:  PLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTH-----------AAVSEVSNYCVDDVISNYRRHATLA
        PL D L       S  S   P    S    VG  K  +++   QS HP  +  EI R   T              A   E S +  + V+SN+ +   L 
Subjt:  PLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTH-----------AAVSEVSNYCVDDVISNYRRHATLA

Query:  MWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE
        MWE I+ KI+RT  + IPRL  E + +F  I +  A  L  L+E
Subjt:  MWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]4.9e-1528.92Show/hide
Query:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------
        K+ +YL+E ++ L+   I  L  PKP                KF  + G DN GK I +   G+  S   + SQS+++D H KRPK+ +K S        
Subjt:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------

Query:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH
                       S L D +++  G   P   VSP++  S++    N K+ +      S  P+ ++  P++++       SE+S++C D++IS+ +R 
Subjt:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH

Query:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
          + +WE + QKI+RT  +++  LE E  KIF AI  + +++L  L+EL
Subjt:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]2.7e-1834.68Show/hide
Query:  LEEDIE---KLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS-SPLYDPLIEAGGHHSPH----------
        L E IE   K +   + L  + K   K G DN GK  R+    +  SK  + SQSS++D HWKRPKK NK S      P+  + G H  H          
Subjt:  LEEDIE---KLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS-SPLYDPLIEAGGHHSPH----------

Query:  ----SFVSPDI--FYSVATHVGNFKVSMDRVVTQSCHPVTVEIPRQMKTTTHAAVSEVSNYCVDDVISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQE
            + V P++     V ++ GN K  +   +  +C PV    P++++ T    VSE+S++C D +IS+ RR A + +WE + QKI+RT  +++  LE E
Subjt:  ----SFVSPDI--FYSVATHVGNFKVSMDRVVTQSCHPVTVEIPRQMKTTTHAAVSEVSNYCVDDVISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQE

Query:  TSKIFLAISETCASNLGPLKEL
          KIF AI+   + NL  L+EL
Subjt:  TSKIFLAISETCASNLGPLKEL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]4.9e-1530.86Show/hide
Query:  LEEDIE---KLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------------------SP------
        L E IE   K +   + L  + K   K G DN GK  R+    +  SK  + SQSS++D HWKRPKK NK S                    SP      
Subjt:  LEEDIE---KLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------------------SP------

Query:  --------LYDPLI-----------EAGGHHSPH------SFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEIPRQMKTTTHAAVSEVSNYCVDDV
                ++ PL+            + G H  H      S  + +    V ++ GN K  +   +  +C PV    P++++ T    VSE+S++C D +
Subjt:  --------LYDPLI-----------EAGGHHSPH------SFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEIPRQMKTTTHAAVSEVSNYCVDDV

Query:  ISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
        IS+ RR A + +WE + QKI+RT  +++  LE E  KIF AI+ + + NL  L+EL
Subjt:  ISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

TrEMBL top hitse value%identityAlignment
A0A5A7SJR1 Uncharacterized protein6.2e-1629.32Show/hide
Query:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------
        K+ +YL+E ++ L+   I  L  PKP                KF  + G DN GK I +   G+  S   + SQS+++D H KRPK+ +K S        
Subjt:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------

Query:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH
                       S L D +++  G   P   VSP++  S++    NFK+ +      S  P+ ++  P++++       SE+S++C D++IS+ +R 
Subjt:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH

Query:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
          + +WE + QKI+RT  +++  LE E  KIF AI  + +++L  L+EL
Subjt:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

A0A5A7U4C3 Uncharacterized protein3.1e-1531.72Show/hide
Query:  KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPSSPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVG---NFKVSMDRVVTQSC
        KF  + G DN  K +      +  S   + S SS++D HWKRPK+ +K S     P IE            PD+  +    +    N K  +   +  +C
Subjt:  KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPSSPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVG---NFKVSMDRVVTQSC

Query:  HPVTVEIPRQMKTTTHAAVSEVSNYCVDDVISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
          VT   P+++  T     SE+S++C D++IS+ R+   + +WE + QKI+RT  +++  LE E  KIF AI+ + ++NL  LKE+
Subjt:  HPVTVEIPRQMKTTTHAAVSEVSNYCVDDVISNYRRHATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

A0A5A7U8L3 PMD domain-containing protein1.6e-1631.97Show/hide
Query:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEP-----GEFRSKDNDSSQSSSNDHHWKRPKKFNK--------------------PSS
        K+G Y E++   LV S I  P +P+ PK  G + GGK IR+ E       E   +  D S +S +D HWKRP K  K                    P S
Subjt:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEP-----GEFRSKDNDSSQSSSNDHHWKRPKKFNK--------------------PSS

Query:  PLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTH-----------AAVSEVSNYCVDDVISNYRRHATLA
        PL D L       S  S   P    S    VG  K  +++   QS HP  +  EI R   T              A   E S +  + V+SN+ +   L 
Subjt:  PLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTH-----------AAVSEVSNYCVDDVISNYRRHATLA

Query:  MWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE
        MWE I+ KI+RT  + IPRL  E + +F  I +  A  L  L+E
Subjt:  MWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE

A0A5D3BCT1 Uncharacterized protein3.1e-1531.25Show/hide
Query:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKD-----NDSSQSSSNDHHWKRPKKFNKPSS-------------PLYDPLI
        ++G Y E++I  LV+S I  P +PK  K  G + GGK IR+ E      K+      D S SS +D HWKRP K  K S              P   PL 
Subjt:  KNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKD-----NDSSQSSSNDHHWKRPKKFNKPSS-------------PLYDPLI

Query:  EAGGH-------HSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTHAAVSE---VSNYC----VDDVISNYRRHATLAMWEC
            H        S  S   P    S    VG  K ++ + + QS  P  +  EI +   T     +      ++ C    +  V+SN  +  TL MWE 
Subjt:  EAGGH-------HSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTV--EIPRQMKTTTHAAVSE---VSNYC----VDDVISNYRRHATLAMWEC

Query:  IEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE
        I+ KI+RT  + IPRL  E + +   I +  A  L PL+E
Subjt:  IEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKE

A0A5D3DHK0 Uncharacterized protein2.3e-1528.92Show/hide
Query:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------
        K+ +YL+E ++ L+   I  L  PKP                KF  + G DN GK I +   G+  S   + SQS+++D H KRPK+ +K S        
Subjt:  KNGNYLEEDIEKLVASAI--LLPPKP----------------KFPKKVGDDNGGKRIRMFEPGEFRSKDNDSSQSSSNDHHWKRPKKFNKPS--------

Query:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH
                       S L D +++  G   P   VSP++  S++    N K+ +      S  P+ ++  P++++       SE+S++C D++IS+ +R 
Subjt:  ---------------SPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEI-PRQMKTTTHAAVSEVSNYCVDDVISNYRRH

Query:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL
          + +WE + QKI+RT  +++  LE E  KIF AI  + +++L  L+EL
Subjt:  ATLAMWECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCATTGCGTAGGATACCCCCACTCGTATGTCTCCTACAGGAACGCGTTGGATCATAGCGTTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTCACCAG
GATAAGGCACCTAGTCTTATCCCTAACTATAGACCCTTTAGGCTTTGGTGGTTGGCAAAAAAATGGAAATTATCTTGAAGAAGACATAGAAAAGTTGGTGGCTAGTGCTA
TTCTTCTTCCTCCCAAGCCGAAATTTCCTAAAAAGGTTGGTGATGACAATGGAGGTAAAAGGATTCGCATGTTTGAACCCGGTGAGTTTCGTTCTAAGGATAATGATAGT
AGTCAGAGCAGTAGCAATGATCATCATTGGAAGAGGCCTAAAAAGTTCAATAAACCATCATCACCTTTATATGATCCCCTTATAGAAGCTGGGGGGCATCATAGTCCTCA
TTCTTTTGTGAGTCCAGACATTTTTTATTCTGTGGCTACACATGTGGGCAATTTCAAAGTGTCGATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACCGTTGAAA
TTCCTAGACAAATGAAGACAACAACTCATGCAGCTGTGTCTGAGGTCTCTAATTATTGTGTTGACGATGTGATTTCCAACTATAGGAGACATGCTACCCTTGCCATGTGG
GAATGTATAGAACAGAAGATCGTACGCACTTCCGTCGACAAGATACCTCGTCTTGAACAAGAGACGTCCAAAATATTTCTTGCGATTTCTGAGACCTGTGCATCCAACTT
GGGCCCTCTTAAAGAACTTGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTGCTTCCCCTATTGGGGTAAAGTAGATGTGTGGGCGCGGT
TCACGACAGTCTGGGCGGTTCTTGACCGGTTCGAGGTATTGTTGACCAGTTCGCGAGGGTTCAAGCTTATTTCAGCCCGGTTCAGCGTGGTTCAGCTTGGTCTGGGTAGT
TTTGGAGCTGGTTCATGCGGTCTGAAGCTGGTTCGGACTGGTTCACGGCTAGATAGGGCATATTTAGATAAATTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCATTGCGTAGGATACCCCCACTCGTATGTCTCCTACAGGAACGCGTTGGATCATAGCGTTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTCACCAG
GATAAGGCACCTAGTCTTATCCCTAACTATAGACCCTTTAGGCTTTGGTGGTTGGCAAAAAAATGGAAATTATCTTGAAGAAGACATAGAAAAGTTGGTGGCTAGTGCTA
TTCTTCTTCCTCCCAAGCCGAAATTTCCTAAAAAGGTTGGTGATGACAATGGAGGTAAAAGGATTCGCATGTTTGAACCCGGTGAGTTTCGTTCTAAGGATAATGATAGT
AGTCAGAGCAGTAGCAATGATCATCATTGGAAGAGGCCTAAAAAGTTCAATAAACCATCATCACCTTTATATGATCCCCTTATAGAAGCTGGGGGGCATCATAGTCCTCA
TTCTTTTGTGAGTCCAGACATTTTTTATTCTGTGGCTACACATGTGGGCAATTTCAAAGTGTCGATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACCGTTGAAA
TTCCTAGACAAATGAAGACAACAACTCATGCAGCTGTGTCTGAGGTCTCTAATTATTGTGTTGACGATGTGATTTCCAACTATAGGAGACATGCTACCCTTGCCATGTGG
GAATGTATAGAACAGAAGATCGTACGCACTTCCGTCGACAAGATACCTCGTCTTGAACAAGAGACGTCCAAAATATTTCTTGCGATTTCTGAGACCTGTGCATCCAACTT
GGGCCCTCTTAAAGAACTTGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTGCTTCCCCTATTGGGGTAAAGTAGATGTGTGGGCGCGGT
TCACGACAGTCTGGGCGGTTCTTGACCGGTTCGAGGTATTGTTGACCAGTTCGCGAGGGTTCAAGCTTATTTCAGCCCGGTTCAGCGTGGTTCAGCTTGGTCTGGGTAGT
TTTGGAGCTGGTTCATGCGGTCTGAAGCTGGTTCGGACTGGTTCACGGCTAGATAGGGCATATTTAGATAAATTAATGTAA
Protein sequenceShow/hide protein sequence
MQTHCVGYPHSYVSYRNALDHSVCIKYKVGRIHSVTRIRHLVLSLTIDPLGFGGWQKNGNYLEEDIEKLVASAILLPPKPKFPKKVGDDNGGKRIRMFEPGEFRSKDNDS
SQSSSNDHHWKRPKKFNKPSSPLYDPLIEAGGHHSPHSFVSPDIFYSVATHVGNFKVSMDRVVTQSCHPVTVEIPRQMKTTTHAAVSEVSNYCVDDVISNYRRHATLAMW
ECIEQKIVRTSVDKIPRLEQETSKIFLAISETCASNLGPLKELGQDRMGAGNITVQDGIHCFPYWGKVDVWARFTTVWAVLDRFEVLLTSSRGFKLISARFSVVQLGLGS
FGAGSCGLKLVRTGSRLDRAYLDKLM