; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004555 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004555
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold9:10180882..10183045
RNA-Seq ExpressionSpg004555
SyntenySpg004555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]1.9e-1838.36Show/hide
Query:  WSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSR
        W QF  +PD     +V EFYAN+ +       VR                     GAQW+ S  E  +F+ S +K E   WL F+  RLL +TH S V++
Subjt:  WSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSR

Query:  DRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVL
        DR +L++AI    SIDVGK+IS+ I +  R K   + FP++IT LC+RAGV  S  + L
Subjt:  DRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVL

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]4.5e-2031.65Show/hide
Query:  RFVNELARAKYRE-MLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR-----
        RFV++ A  +Y   ++ +  + ERGF   GE     +   +    W  F A P+     +V EFYAN  + +  + +VRG  V   +  +N         
Subjt:  RFVNELARAKYRE-MLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR-----

Query:  --------EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRK
                E GI+           GAQW+++K E  +F+++ L   A  WL FI  R+LPT H   V+ DR LL++ I    + DVGKIIS+ I      
Subjt:  --------EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRK

Query:  KVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
            L FP++IT LC+RAGV     + L+  +  ID+
Subjt:  KVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

PIN07564.1 hypothetical protein CDL12_19862 [Handroanthus impetiginosus]1.7e-1931.33Show/hide
Query:  NELARAKYREMLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR---------
        N+ AR    + L +  + ERGF   GE     +   +    W  F A+P+     +  EFYAN  + + F+ +VRG  V      +N             
Subjt:  NELARAKYREMLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR---------

Query:  ----EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGK
            E GI+           GAQW+++K E  +F+++ L   A  WL FI  ++LPT+H   V+ D+ LL++ I    + DVGKIISN I          
Subjt:  ----EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGK

Query:  LIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
        L FP++IT LC+RAGV     + L+  +  ID+
Subjt:  LIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]8.1e-2232.92Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  + W QF A P+     +V EFYAN+ D     V VRG+ V+ S + +NA   
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---

Query:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI
                               +  V + GA+W +S     T   S L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++    SI+VG++I +EI
Subjt:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI

Query:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
             +K G L FP++IT LC  A  P   ++  L + G ID+
Subjt:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-2233.74Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  + W QF A P+     +V EFYAN+ D E   V VRG+ V+ S + +NA   
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---

Query:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI
                               +  V   GA+W +S     T   S L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++    SI+VG++I +EI
Subjt:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI

Query:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
             +K G L FP++IT LC  A  P   ++  L + G ID+
Subjt:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein9.1e-1938.36Show/hide
Query:  WSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSR
        W QF  +PD     +V EFYAN+ +       VR                     GAQW+ S  E  +F+ S +K E   WL F+  RLL +TH S V++
Subjt:  WSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSR

Query:  DRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVL
        DR +L++AI    SIDVGK+IS+ I +  R K   + FP++IT LC+RAGV  S  + L
Subjt:  DRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVL

A0A2G9G807 Uncharacterized protein2.2e-2031.65Show/hide
Query:  RFVNELARAKYRE-MLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR-----
        RFV++ A  +Y   ++ +  + ERGF   GE     +   +    W  F A P+     +V EFYAN  + +  + +VRG  V   +  +N         
Subjt:  RFVNELARAKYRE-MLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR-----

Query:  --------EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRK
                E GI+           GAQW+++K E  +F+++ L   A  WL FI  R+LPT H   V+ DR LL++ I    + DVGKIIS+ I      
Subjt:  --------EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRK

Query:  KVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
            L FP++IT LC+RAGV     + L+  +  ID+
Subjt:  KVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

A0A2G9GQI5 Uncharacterized protein8.2e-2031.33Show/hide
Query:  NELARAKYREMLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR---------
        N+ AR    + L +  + ERGF   GE     +   +    W  F A+P+     +  EFYAN  + + F+ +VRG  V      +N             
Subjt:  NELARAKYREMLKRDFLFERGF---GEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVR---------

Query:  ----EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGK
            E GI+           GAQW+++K E  +F+++ L   A  WL FI  ++LPT+H   V+ D+ LL++ I    + DVGKIISN I          
Subjt:  ----EVGIE-----------GAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGK

Query:  LIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
        L FP++IT LC+RAGV     + L+  +  ID+
Subjt:  LIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

A0A2P5AGA5 Uncharacterized protein (Fragment)3.9e-2232.92Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  + W QF A P+     +V EFYAN+ D     V VRG+ V+ S + +NA   
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---

Query:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI
                               +  V + GA+W +S     T   S L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++    SI+VG++I +EI
Subjt:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI

Query:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
             +K G L FP++IT LC  A  P   ++  L + G ID+
Subjt:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

A0A2P5BCG4 Uncharacterized protein (Fragment)7.9e-2333.74Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  + W QF A P+     +V EFYAN+ D E   V VRG+ V+ S + +NA   
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNA---

Query:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI
                               +  V   GA+W +S     T   S L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++    SI+VG++I +EI
Subjt:  ----------------------AVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIKLRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEI

Query:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS
             +K G L FP++IT LC  A  P   ++  L + G ID+
Subjt:  YNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGTAGTGTAAGCGGCAAGAAAAGACTGTCGTCACAGTGTCGTGACGCTTCTGAAATGGATAAAACAATAGGGAGGAAAGAGAGAGATACTAAGGAAGAGGAAGT
TCCCATTACGCCTGAGGCACCAAAGACAAAAGCAAAGAGAAGGAAGACGCCGAAAGAGAGAGAGGCTAAGAGACGAAGAAGACAACAGAGAGTCGAGGTTACGAAAGTAG
TGAGAAAGGTGATTGAGGACATTGCTGATGACGCGGTTGAAGAAGAACAGTCGAAGGAACCTGAGGAAAAGAAAGATCCTGAACAGAGTGAACCGGTAGTTGAAAATTTG
CAAGAGGTGCAAGAGAAGCAAGCGGAAGATATGCAAGAACAAGGAAATGGTCAGGGGCAACAGTCTGAAGTAGTTGTGCCAGAGATTCCACGTCAATCTGTAAAAGAAAA
CTCTGAGAAAGAAGAGCAAGAGAAAAAGGGGGCAAAAGACCAGGAAAAGGAAGAAACGGAAAAGAAAGCAGAAGAAGAAGCTTTGGCGAAGCATCAAGAAGACAAGGGCA
AGGGAGTTGTCGAAGCAATGGATGAAGCAAAAGAGGAAGAAGCAGGAATGCCGTTTATTCGCTTCGTTAATGAACTTGCCAGAGCAAAATACAGAGAGATGTTGAAAAGG
GATTTCCTATTTGAAAGAGGTTTTGGTGAAGATTTACCACATTTCTTGAGGGCTGGAATAGCAAATTACGGGTGGAGTCAATTCTATGCGAAACCAGATCCACTAAATTG
GAACATTGTTTGTGAATTTTACGCGAACATAGATGATCAAGAAGGATTCCAAGTCATGGTCCGAGGGATGGTGGTGGCACCATCTAATGATCAACTGAACGCGGCTGTTA
GGGAGGTTGGTATTGAAGGGGCTCAATGGAGGTTGTCGAAGACGGAGAAGCGCACATTCCAAGCATCTTATTTAAAGAGTGAGGCTAACACATGGTTGGGTTTCATCAAA
TTGCGATTGCTTCCGACAACCCACGACTCGACAGTATCCCGAGACAGAGTGCTTCTAGTATTTGCTATTCAGCGTTCTTTGAGTATAGATGTGGGTAAAATAATTTCAAA
TGAAATCTACAATTTCTGGCGTAAGAAGGTGGGAAAGCTAATCTTCCCGAATATGATTACCATGTTATGCAGCAGGGCAGGAGTGCCCACTAGTCCAGACGATGTTCTTC
TACTTGACAAGGGGATAATTGATAGCGAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGTAGTGTAAGCGGCAAGAAAAGACTGTCGTCACAGTGTCGTGACGCTTCTGAAATGGATAAAACAATAGGGAGGAAAGAGAGAGATACTAAGGAAGAGGAAGT
TCCCATTACGCCTGAGGCACCAAAGACAAAAGCAAAGAGAAGGAAGACGCCGAAAGAGAGAGAGGCTAAGAGACGAAGAAGACAACAGAGAGTCGAGGTTACGAAAGTAG
TGAGAAAGGTGATTGAGGACATTGCTGATGACGCGGTTGAAGAAGAACAGTCGAAGGAACCTGAGGAAAAGAAAGATCCTGAACAGAGTGAACCGGTAGTTGAAAATTTG
CAAGAGGTGCAAGAGAAGCAAGCGGAAGATATGCAAGAACAAGGAAATGGTCAGGGGCAACAGTCTGAAGTAGTTGTGCCAGAGATTCCACGTCAATCTGTAAAAGAAAA
CTCTGAGAAAGAAGAGCAAGAGAAAAAGGGGGCAAAAGACCAGGAAAAGGAAGAAACGGAAAAGAAAGCAGAAGAAGAAGCTTTGGCGAAGCATCAAGAAGACAAGGGCA
AGGGAGTTGTCGAAGCAATGGATGAAGCAAAAGAGGAAGAAGCAGGAATGCCGTTTATTCGCTTCGTTAATGAACTTGCCAGAGCAAAATACAGAGAGATGTTGAAAAGG
GATTTCCTATTTGAAAGAGGTTTTGGTGAAGATTTACCACATTTCTTGAGGGCTGGAATAGCAAATTACGGGTGGAGTCAATTCTATGCGAAACCAGATCCACTAAATTG
GAACATTGTTTGTGAATTTTACGCGAACATAGATGATCAAGAAGGATTCCAAGTCATGGTCCGAGGGATGGTGGTGGCACCATCTAATGATCAACTGAACGCGGCTGTTA
GGGAGGTTGGTATTGAAGGGGCTCAATGGAGGTTGTCGAAGACGGAGAAGCGCACATTCCAAGCATCTTATTTAAAGAGTGAGGCTAACACATGGTTGGGTTTCATCAAA
TTGCGATTGCTTCCGACAACCCACGACTCGACAGTATCCCGAGACAGAGTGCTTCTAGTATTTGCTATTCAGCGTTCTTTGAGTATAGATGTGGGTAAAATAATTTCAAA
TGAAATCTACAATTTCTGGCGTAAGAAGGTGGGAAAGCTAATCTTCCCGAATATGATTACCATGTTATGCAGCAGGGCAGGAGTGCCCACTAGTCCAGACGATGTTCTTC
TACTTGACAAGGGGATAATTGATAGCGAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MLGSVSGKKRLSSQCRDASEMDKTIGRKERDTKEEEVPITPEAPKTKAKRRKTPKEREAKRRRRQQRVEVTKVVRKVIEDIADDAVEEEQSKEPEEKKDPEQSEPVVENL
QEVQEKQAEDMQEQGNGQGQQSEVVVPEIPRQSVKENSEKEEQEKKGAKDQEKEETEKKAEEEALAKHQEDKGKGVVEAMDEAKEEEAGMPFIRFVNELARAKYREMLKR
DFLFERGFGEDLPHFLRAGIANYGWSQFYAKPDPLNWNIVCEFYANIDDQEGFQVMVRGMVVAPSNDQLNAAVREVGIEGAQWRLSKTEKRTFQASYLKSEANTWLGFIK
LRLLPTTHDSTVSRDRVLLVFAIQRSLSIDVGKIISNEIYNFWRKKVGKLIFPNMITMLCSRAGVPTSPDDVLLLDKGIIDSEHS