; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004567 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004567
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold9:10361641..10369252
RNA-Seq ExpressionSpg004567
SyntenySpg004567
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]6.6e-0837.5Show/hide
Query:  QLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQ---ISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQ
        +L + ASW+E  G+G V WV+HDS GS +C+  K++R+ W +K LE KA++EGL     I +T       +  L    E+  IL     DL E+  + D+
Subjt:  QLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQ---ISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQ

Query:  ISVLASSLSGVI
        I  L   L+G+I
Subjt:  ISVLASSLSGVI

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.4e-0534.78Show/hide
Query:  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS
        NCW+L TDASW+E    G +GW++ D  G +V  G  +IR+   I  LE+  I+ GL  I+   ++RS  + + +D++E++ ++     DL+
Subjt:  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.5e-0731.43Show/hide
Query:  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQIS
        W L  DASW++   RG +GW++   +G +V  G + +    ++K LE  AILEGL  +++    R + ++  TD+ E+ ++L  + EDL++   + ++I 
Subjt:  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQIS

Query:  VLASS
         L  S
Subjt:  VLASS

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132166.7e-0634.78Show/hide
Query:  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS
        NCW+L TDASW+E    G +GW++ D  G +V  G  +IR+   I  LE+  I+ GL  I+   ++RS  + + +D++E++ ++     DL+
Subjt:  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS

A0A6J1DNV9 uncharacterized protein LOC1110224031.2e-0731.43Show/hide
Query:  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQIS
        W L  DASW++   RG +GW++   +G +V  G + +    ++K LE  AILEGL  +++    R + ++  TD+ E+ ++L  + EDL++   + ++I 
Subjt:  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQIS

Query:  VLASS
         L  S
Subjt:  VLASS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACCACCCGAGTCAAGTGCCGACGACGATCCTTTCTCCTAATTGCTGGCAGCTCAAGACCGATGCATCCTGGAACGAGATGCTTGGTAGAGGAAGTGTAGGATG
GGTGGTGCATGACTCGGAGGGATCCCTTGTCTGCGTCGGAATGAAGCAAATCAGGAAATTCTGGTCAATTAAGACGCTGGAAGTGAAAGCCATTCTAGAGGGATTACATC
AAATTTCGGATACCTGTAAAAACAGATCAATCGCCGTTGATGTCCTAACGGACGCCATTGAAATCGTCAACATCCTCACTGGTAGAGTGGAGGATCTCTCGGAGGTGAAA
GCGATCACCGACCAAATCAGCGTCTTAGCCTCGTCGTTGTCGGGCGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAACCGGGCAGAAATCGGACTGGA
GGATGAACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTCGGGCTCCTGCTCGGCTCGCCTGCGCGGGTCGAGCCCGTCTGGCTCCGTATGGTCC
CTACCGCCTCTGGCCACCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACA
CCGGTGTGCATGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAACTTCACTGTCGATTATCATGTGGAGCGAAGCTGAAGCAAGCGGGGGAGCGTGGAAT
TGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGAGTCTAGAGCGAGGAGTCTAAAATTTGATGAAATCATAAGAGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGG
GATCCACTTCCATAGGTTGTCTAGTGAGTCATGTGGCCGGTGATTCATTGGCACCCATTCATGAGCTTAATTCTTTCGATCTTGCTGAGGATGAGCATTTAGGGGTGAGT
TGCATAGATAGTAGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGGAGGTAGA
GTTTGAGGTTGAAAAGCCTTCGTCTGATTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTTTTCTATTCTCACGAGATAGGCTTTCTTGTCAATTCTCAAGCTT
TCGATGAGTTAGAGAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACAGCACATACTCAGAGATT
GTGAGAGTTGAAATCACCAGAGAAAGCCGAAGATCTCCAATACGACCCAAAGTTATGTTGAGGATGAATGAGTTCATGAAAGCCAACTGGAGGGGAAAGATGGAGAATGG
AAGGGCTCAAAGGAGAGGTCAGAGAGGGAGAGGAAGAGACAGAGGAAGTGGCAGAAATTGGGATGAAAACAGGAAAAGAATGGAAGAAGAGGATCCAAGAGATGAAAAGT
CGAGTAACACCTTTGTCGAAGAGACTGAAAGTAGCCGAAATCAGATGAGGGAGGAGACGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACCACCCGAGTCAAGTGCCGACGACGATCCTTTCTCCTAATTGCTGGCAGCTCAAGACCGATGCATCCTGGAACGAGATGCTTGGTAGAGGAAGTGTAGGATG
GGTGGTGCATGACTCGGAGGGATCCCTTGTCTGCGTCGGAATGAAGCAAATCAGGAAATTCTGGTCAATTAAGACGCTGGAAGTGAAAGCCATTCTAGAGGGATTACATC
AAATTTCGGATACCTGTAAAAACAGATCAATCGCCGTTGATGTCCTAACGGACGCCATTGAAATCGTCAACATCCTCACTGGTAGAGTGGAGGATCTCTCGGAGGTGAAA
GCGATCACCGACCAAATCAGCGTCTTAGCCTCGTCGTTGTCGGGCGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAACCGGGCAGAAATCGGACTGGA
GGATGAACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTCGGGCTCCTGCTCGGCTCGCCTGCGCGGGTCGAGCCCGTCTGGCTCCGTATGGTCC
CTACCGCCTCTGGCCACCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACA
CCGGTGTGCATGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAACTTCACTGTCGATTATCATGTGGAGCGAAGCTGAAGCAAGCGGGGGAGCGTGGAAT
TGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGAGTCTAGAGCGAGGAGTCTAAAATTTGATGAAATCATAAGAGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGG
GATCCACTTCCATAGGTTGTCTAGTGAGTCATGTGGCCGGTGATTCATTGGCACCCATTCATGAGCTTAATTCTTTCGATCTTGCTGAGGATGAGCATTTAGGGGTGAGT
TGCATAGATAGTAGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGGAGGTAGA
GTTTGAGGTTGAAAAGCCTTCGTCTGATTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTTTTCTATTCTCACGAGATAGGCTTTCTTGTCAATTCTCAAGCTT
TCGATGAGTTAGAGAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACAGCACATACTCAGAGATT
GTGAGAGTTGAAATCACCAGAGAAAGCCGAAGATCTCCAATACGACCCAAAGTTATGTTGAGGATGAATGAGTTCATGAAAGCCAACTGGAGGGGAAAGATGGAGAATGG
AAGGGCTCAAAGGAGAGGTCAGAGAGGGAGAGGAAGAGACAGAGGAAGTGGCAGAAATTGGGATGAAAACAGGAAAAGAATGGAAGAAGAGGATCCAAGAGATGAAAAGT
CGAGTAACACCTTTGTCGAAGAGACTGAAAGTAGCCGAAATCAGATGAGGGAGGAGACGAGATAA
Protein sequenceShow/hide protein sequence
MGNHPSQVPTTILSPNCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVK
AITDQISVLASSLSGVILDHPDVQGADEDNRAEIGLEDEPRGRNGPVGQAKTEGVGLLLGSPARVEPVWLRMVPTASGHPGSVWFVPKRLRIPKNPRSMSSIGGGVASTT
PVCMFTLLQATSSPVLKQLHCRLSCGAKLKQAGERGIEDFVRGDRNGDESRARSLKFDEIIRGLQTPKEVSEVGSTSIGCLVSHVAGDSLAPIHELNSFDLAEDEHLGVS
CIDSREELESCSTFQEHVCEEEKENELAVTEEVQEVEFEVEKPSSDLSSPSFVDFDCSFFYSHEIGFLVNSQAFDELEKNDILKLKQAGERGIEDFVRGDRNGDSTYSEI
VRVEITRESRRSPIRPKVMLRMNEFMKANWRGKMENGRAQRRGQRGRGRDRGSGRNWDENRKRMEEEDPRDEKSSNTFVEETESSRNQMREETR