; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004574 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004574
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-H2 finger protein ATL7
Genome locationscaffold9:10096680..10099136
RNA-Seq ExpressionSpg004574
SyntenySpg004574
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039350.1 RING-H2 finger protein ATL7 [Cucumis melo var. makuwa]6.4e-4387.16Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_004141521.1 RING-H2 finger protein ATL58 [Cucumis sativus]8.9e-4588.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA N+NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_008459509.1 PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo]6.4e-4387.16Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_022973422.1 RING-H2 finger protein ATL7-like [Cucurbita maxima]2.7e-4181.48Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S AVN+N++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

XP_038889575.1 RING-H2 finger protein ATL7-like [Benincasa hispida]9.5e-4792.66Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK YSV ASGPG VSRPAPELKLYQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAAVN+NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ9 RING-type domain-containing protein4.3e-4588.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA N+NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A1S3C9U6 RING-H2 finger protein ATL73.1e-4387.16Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A5A7T7X7 RING-H2 finger protein ATL73.1e-4387.16Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  +NN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A6J1EX46 RING-H2 finger protein ATL7-like3.8e-4180.56Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S  VN+N++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

A0A6J1I7H2 RING-H2 finger protein ATL7-like1.3e-4181.48Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S AVN+N++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

SwissProt top hitse value%identityAlignment
Q570X5 RING-H2 finger protein ATL581.5e-1849.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ 
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+F V D+
Subjt:  ETFFVTDT

Q84TF5 Probable E3 ubiquitin-protein ligase RHA4A3.8e-0637.08Show/hide
Query:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL
        A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +S+  S   + +K E ++ L ++++NE     D+L
Subjt:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL

Q9SN27 E3 ubiquitin-protein ligase ATL593.4e-0738.46Show/hide
Query:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        F+ C+P+    ++L +  +LY+ RR +    DW+S+         +NN+S++E+GL K+ REMLPI++Y E+F V DT
Subjt:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

Q9SN28 RING-H2 finger protein ATL74.1e-1647.78Show/hide
Query:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  +NN+S++E+GL K+ REMLP+++Y E+F V D+
Subjt:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

Arabidopsis top hitse value%identityAlignment
AT1G33480.1 RING/U-box superfamily protein1.1e-1949.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN
        M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ 
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+F V D+
Subjt:  ETFFVTDT

AT4G10150.1 RING/U-box superfamily protein2.9e-1747.78Show/hide
Query:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  +NN+S++E+GL K+ REMLP+++Y E+F V D+
Subjt:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

AT4G10160.1 RING/U-box superfamily protein2.4e-0838.46Show/hide
Query:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        F+ C+P+    ++L +  +LY+ RR +    DW+S+         +NN+S++E+GL K+ REMLPI++Y E+F V DT
Subjt:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

AT4G24015.1 RING/U-box superfamily protein2.7e-0737.08Show/hide
Query:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL
        A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +S+  S   + +K E ++ L ++++NE     D+L
Subjt:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTT
CTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAG
TCAACAGCAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTT
CTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAG
TCAACAGCAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGA
Protein sequenceShow/hide protein sequence
MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNSNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL