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Spg004595 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004595
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold9:11111390..11113672
RNA-Seq ExpressionSpg004595
SyntenySpg004595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.8e-1840Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E   KR           K++R  D  +G     R +  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-2141.82Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E + KR           K++R  D  +G     R +  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.3e-2140.35Show/hide
Query:  QKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP
        QKYMSAEE       L+ K+ +++ +R       S+ +K+ R+                Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P
Subjt:  QKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP

Query:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]8.2e-1940Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E + KR           K++R  D  +G     R +  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

XP_030948866.1 uncharacterized protein LOC115972746 [Quercus lobata]1.5e-1741.45Show/hide
Query:  KYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQ
        KYM+AE+ L    L  E K      +D+R+D+ +++   G  R D  R +P  G    +F  +TP + P +Q+LM+I+N   L  P KLK NP+ R + +
Subjt:  KYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQ

Query:  YCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEAD-QRWPRPTRDD
        YC FHRDHGH T NC  LK +IEALIR G L+ F +K   D    P P R++
Subjt:  YCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEAD-QRWPRPTRDD

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128058.8e-1940Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E   KR           K++R  D  +G     R +  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-2141.82Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E + KR           K++R  D  +G     R +  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q          G+    P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257853.9e-1940Show/hide
Query:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMSA E   SK+ E + KR           K++R  D  +G     R +  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K 
Subjt:  QKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q          G+ +  P  EIR
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A6J1DZ52 uncharacterized protein LOC1110256126.5e-2240.35Show/hide
Query:  QKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP
        QKYMSAEE       L+ K+ +++ +R       S+ +K+ R+                Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P
Subjt:  QKYMSAEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP

Query:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR
        + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Subjt:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

A0A7N2N013 Ribonuclease H2.8e-1743.06Show/hide
Query:  KYMSAEELLKSKKLEREHKRPSSSDR--DSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDK
        KYM+AE+ L S++      RP   DR  DSR+D+ ++    G  R D  R +P  G    +F  +TP + P +Q+LM+I++   L  P KLKS+P  R +
Subjt:  KYMSAEELLKSKKLEREHKRPSSSDR--DSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDK

Query:  SQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
         +YC FHRDHGH T +C  LK +IEALIR G L++F  K   DQ
Subjt:  SQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGGAGACCGACCCAGAGGAAGAACCGACCAAAGGGCTGGGCCAACTTGGCCCGACCCATATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCA
TGCGCGGGCCGAGCTCGGTCATCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCAAATTCCTAAAAACCCTAGGAGCA
CGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACATCGGTGTGCAGGTTTTCTCTTTCGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAA
GGTCAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATC
TCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATAC
TTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACG
AGGTCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTTAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGA
CTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCG
AAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTA
AACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAAAGTACATGAGCGCAGAGGA
GTTGCTCAAGTCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGTGACAGTAGGAAGGACAAAAAGCAGCGGATCGACGACCATGGCCGAGGCCGAC
CAGACCATGGCCGAGGCCAACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACA
AACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTGCATTCA
GCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCA
AAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGGAGACCGACCCAGAGGAAGAACCGACCAAAGGGCTGGGCCAACTTGGCCCGACCCATATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCA
TGCGCGGGCCGAGCTCGGTCATCTCCTCTCGGTCCCCAATGCCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCAAATTCCTAAAAACCCTAGGAGCA
CGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACATCGGTGTGCAGGTTTTCTCTTTCGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAA
GGTCAGGGGATGGAGAAGAGAATTCAAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATC
TCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTTGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATAC
TTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGACCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACG
AGGTCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTTAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGA
CTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCG
AAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTA
AACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAAAGTACATGAGCGCAGAGGA
GTTGCTCAAGTCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGTGACAGTAGGAAGGACAAAAAGCAGCGGATCGACGACCATGGCCGAGGCCGAC
CAGACCATGGCCGAGGCCAACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACA
AACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAACCAGGAACTGCATTCA
GCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAGACGACCCAGGCA
AAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA
Protein sequenceShow/hide protein sequence
MARRPTQRKNRPKGWANLARPIWSASAQGRGRPFGPHARAELGHLLSVPNAASRLGFAWFVPKRLQIPKNPRSTSSIGGGVASTTSVCRFSLSQATSSPSSTNLPLVARE
GQGMEKRIQDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESET
RSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNPPWKTELL
NTLKELGNPQGYLQKLKDSGAQDLEELIDQKYMSAEELLKSKKLEREHKRPSSSDRDSRKDKKQRIDDHGRGRPDHGRGQPDQGDYLKKFERYTPTSIPQEQILMEIRNT
NLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR