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Spg004599 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004599
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold9:10151820..10156340
RNA-Seq ExpressionSpg004599
SyntenySpg004599
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO82648.1 hypothetical protein COLO4_22892 [Corchorus olitorius]5.7e-0532.26Show/hide
Query:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE
        FH +G  V   ++  Y  G    L +D D LS IEL  L+ +A   NV   +Y +PGL + RGL LI  D D+L M   +     +  Y  H   +P++ 
Subjt:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE

Query:  VMHL-------GLNLAHTSSHSSI
        V+ L       G N AH  + + +
Subjt:  VMHL-------GLNLAHTSSHSSI

OMO88652.1 hypothetical protein COLO4_20144 [Corchorus olitorius]1.5e-0534.62Show/hide
Query:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE
        FH +G  V   ++  Y  G    L +D D LS IEL  L+ +A   NV   +Y +PG+ + +GL LI  D D+L M   +     + IYV H   +P++ 
Subjt:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE

Query:  VMHL
        V+ L
Subjt:  VMHL

PWA41172.1 transposase, MuDR, MULE transposase domain protein [Artemisia annua]4.3e-0528.36Show/hide
Query:  IFHCNGRLVIADAYEYVGG-TEIALTVDRDMLSVIELNTLMSEANVFNV-QRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEHNPNEEV
        I+H  G         Y+GG       +D D+ SV+E++ +M E    N    Y+Y KP  +L  GL+ +  D+D+L M++ +     + +YV+H+ ++E 
Subjt:  IFHCNGRLVIADAYEYVGG-TEIALTVDRDMLSVIELNTLMSEANVFNV-QRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEHNPNEEV

Query:  MHL--GLNLAHTS---SHSSIEFEKNDLVSDGRE
          +  GL ++ T+    H S+  + ND+  D  E
Subjt:  MHL--GLNLAHTS---SHSSIEFEKNDLVSDGRE

XP_038721181.1 uncharacterized protein LOC120013448 [Tripterygium wilfordii]1.6e-0433.65Show/hide
Query:  MDNI--DLIFHCNGRLV---IADAYEYVGG-TEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHI
        MD+I  D++ H  G+L    I+   EYVGG        + DM S+ E+   + E    +++   +L P      GL  IR+D+D+L MI  I G++ + +
Subjt:  MDNI--DLIFHCNGRLV---IADAYEYVGG-TEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHI

Query:  YVEH
        YVEH
Subjt:  YVEH

XP_040253504.1 uncharacterized protein LOC120970597, partial [Aegilops tauschii subsp. strangulata]2.2e-0435.78Show/hide
Query:  MDNIDLI---FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIE----LNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTL
        MD +DLI   FH NG  V   +   Y+GG+E    +DRD LS+ E    L    ++      Q YW L PG E+  GL  +  D  +L M   +C     
Subjt:  MDNIDLI---FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIE----LNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTL

Query:  HIYVE-HNP
         +YVE H P
Subjt:  HIYVE-HNP

TrEMBL top hitse value%identityAlignment
A0A1R3J1E7 Uncharacterized protein7.2e-0634.62Show/hide
Query:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE
        FH +G  V   ++  Y  G    L +D D LS IEL  L+ +A   NV   +Y +PG+ + +GL LI  D D+L M   +     + IYV H   +P++ 
Subjt:  FHCNGRLV-IADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEH---NPNEE

Query:  VMHL
        V+ L
Subjt:  VMHL

A0A2N9G9R3 SWIM-type domain-containing protein1.2e-0535.14Show/hide
Query:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH
        + D+I H  G   + D    Y+GG E  L   D D  SV EL+    E +V NV +++Y  PG+ L  GL+ +R D+D    +  + I   N +H+YV H
Subjt:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH

Query:  NPNEEVMHLGL
           EEV  L +
Subjt:  NPNEEVMHLGL

A0A2N9GYG5 Uncharacterized protein1.9e-0636.04Show/hide
Query:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH
        + D+I H  G   + D    Y+GG E  L   D D  SV EL+    E +V NV +++Y  PG+ L  GL+ +R D+D    +  + I   N +H+YVEH
Subjt:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH

Query:  NPNEEVMHLGL
           EEV  L +
Subjt:  NPNEEVMHLGL

A0A2N9H3P9 DBD_Tnp_Mut domain-containing protein1.9e-0636.04Show/hide
Query:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH
        + D+I H  G   + D    Y+GG E  L   D D  SV EL+    E +V NV +++Y  PG+ L  GL+ +R D+D    +  + I   N +H+YVEH
Subjt:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH

Query:  NPNEEVMHLGL
           EEV  L +
Subjt:  NPNEEVMHLGL

A0A2N9HTG5 SWIM-type domain-containing protein1.2e-0535.14Show/hide
Query:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH
        + D+I H  G   + D    Y+GG E  L   D D  SV EL+    E +V NV +++Y  PG+ L  GL+ +R D+D    +  + I   N +H+YV H
Subjt:  NIDLIFHCNGRLVIADAYE-YVGGTEIALTV-DRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMI--SLICGDNTLHIYVEH

Query:  NPNEEVMHLGL
           EEV  L +
Subjt:  NPNEEVMHLGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAACATAGATCTCATATTCCATTGCAATGGTCGACTTGTTATAGCTGATGCCTATGAATATGTTGGGGGAACTGAGATAGCTTTGACTGTTGATAGGGACATGTT
ATCTGTCATTGAATTAAATACATTGATGTCAGAAGCAAATGTATTTAATGTTCAACGCTATTGGTATTTGAAACCAGGTTTAGAATTGCCTCGTGGTTTAAGTTTAATTA
GACATGATGAAGATATTTTAACTATGATAAGTCTCATTTGTGGGGATAACACTTTGCACATATATGTTGAACATAACCCAAATGAAGAAGTAATGCATCTAGGTTTGAAT
CTCGCCCACACATCTAGTCATAGCTCTATTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGGAGGGAGATTCTTCACAACGACCCCAACTTGCTGAAGCTACGACAATA
CGAGACCTACAACTGCCTCAATCTTCTGGATCTTTACATACACGACAAGAGTAGGCATCAACCTTCGGTTTTCAATTCACAATCGACTTTTGTAACTTGTTCAGCAGGTG
TAGGAGTAGGTTTGATGGACTTAAACTTTGCCAGGCCAATGAGATCACCAAATAGATTATCTTCAGGCTTAGAAGGCTTGTTGGGAGGCACATCCAGAGGCAATCAAGGA
GTTTCTAAAAAATTTCTCCATGCGATAGATGGTTGCAGTGATGTTGACTGGAAAACACGAATGACCGCGGCTAGAGGACGGCGACGGCTGGCGGATTGCAATGGCTACCG
GAACAACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAACATAGATCTCATATTCCATTGCAATGGTCGACTTGTTATAGCTGATGCCTATGAATATGTTGGGGGAACTGAGATAGCTTTGACTGTTGATAGGGACATGTT
ATCTGTCATTGAATTAAATACATTGATGTCAGAAGCAAATGTATTTAATGTTCAACGCTATTGGTATTTGAAACCAGGTTTAGAATTGCCTCGTGGTTTAAGTTTAATTA
GACATGATGAAGATATTTTAACTATGATAAGTCTCATTTGTGGGGATAACACTTTGCACATATATGTTGAACATAACCCAAATGAAGAAGTAATGCATCTAGGTTTGAAT
CTCGCCCACACATCTAGTCATAGCTCTATTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGGAGGGAGATTCTTCACAACGACCCCAACTTGCTGAAGCTACGACAATA
CGAGACCTACAACTGCCTCAATCTTCTGGATCTTTACATACACGACAAGAGTAGGCATCAACCTTCGGTTTTCAATTCACAATCGACTTTTGTAACTTGTTCAGCAGGTG
TAGGAGTAGGTTTGATGGACTTAAACTTTGCCAGGCCAATGAGATCACCAAATAGATTATCTTCAGGCTTAGAAGGCTTGTTGGGAGGCACATCCAGAGGCAATCAAGGA
GTTTCTAAAAAATTTCTCCATGCGATAGATGGTTGCAGTGATGTTGACTGGAAAACACGAATGACCGCGGCTAGAGGACGGCGACGGCTGGCGGATTGCAATGGCTACCG
GAACAACTTCTAG
Protein sequenceShow/hide protein sequence
MDNIDLIFHCNGRLVIADAYEYVGGTEIALTVDRDMLSVIELNTLMSEANVFNVQRYWYLKPGLELPRGLSLIRHDEDILTMISLICGDNTLHIYVEHNPNEEVMHLGLN
LAHTSSHSSIEFEKNDLVSDGREILHNDPNLLKLRQYETYNCLNLLDLYIHDKSRHQPSVFNSQSTFVTCSAGVGVGLMDLNFARPMRSPNRLSSGLEGLLGGTSRGNQG
VSKKFLHAIDGCSDVDWKTRMTAARGRRRLADCNGYRNNF