; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004622 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004622
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:11411984..11413667
RNA-Seq ExpressionSpg004622
SyntenySpg004622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.4e-1929.77Show/hide
Query:  PHFLRAGITNHGWDQFCAKPES---------------VNSNIV-----------RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLS
        P F+   I  HGW QFC  P +                N   V           RAINS+F L++     + +     +++QL   + EV I+GA W++S
Subjt:  PHFLRAGITNHGWDQFCAKPES---------------VNSNIV-----------RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLS

Query:  KTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNC-WSKKVGKLFFPNTITMLCSRAGVPTSPEDVILL
             T     LK  A  W  F+    +P+TH  TV++DRVLL+++ L  + +++ +I   EI  C  ++K G L+FP+ IT L  +A VP   ++ I+ 
Subjt:  KTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNC-WSKKVGKLFFPNTITMLCSRAGVPTSPEDVILL

Query:  DKGIIDMPNLARLQR
        + G I   +++R+ +
Subjt:  DKGIIDMPNLARLQR

EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]2.0e-2129.13Show/hide
Query:  KQQEDKGKGV--------AEAPTETEEIDVEEPSLPYARFINDFTRAKYLEMLKRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVRAINS
        K +  KGKGV        +E+   TE  +V++ + P A    D    K    ++RGF++ RG     P F+ + I  H W  FC  P +  + +  AINS
Subjt:  KQQEDKGKGV--------AEAPTETEEIDVEEPSLPYARFINDFTRAKYLEMLKRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVRAINS

Query:  LFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKII
        L++L D     F+    + + DQL+  + E+ ++G +W  +     TF    L+     W  F++  L+P++H   V ++R +L++  ++   ++VG++I
Subjt:  LFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKII

Query:  YSEIYNCWSKKVGKLFFPNTITMLCSRAGV
          ++  C  +K G L+FP+ IT LC   GV
Subjt:  YSEIYNCWSKKVGKLFFPNTITMLCSRAGV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.8e-2333.63Show/hide
Query:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA
        ++GF+ +         F+   IT H W QFCA PE     +VR                          AIN++F L D P     E +   +   L   
Subjt:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA

Query:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR
        +  V + GA+W +S     T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+ + L    I+VG++I+SEI  C ++K G LFFP+ IT LC  
Subjt:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR

Query:  AGVPTSPEDVILLDKGIIDMPNLARL
        A  P    +  L + G ID   +AR+
Subjt:  AGVPTSPEDVILLDKGIIDMPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.9e-2233.19Show/hide
Query:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA
        ++GF+ +         F+   IT H W QFCA PE     +VR                          AIN++F L D P     E +   +   L   
Subjt:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA

Query:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR
        +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ + L    I+VG++I+SEI  C ++K G LFFP+ IT LC  
Subjt:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR

Query:  AGVPTSPEDVILLDKGIIDMPNLARL
        A  P    +  L + G ID   +AR+
Subjt:  AGVPTSPEDVILLDKGIIDMPNLARL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]4.2e-1938.69Show/hide
Query:  RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGID
        ++IN LFNL D     ++ M+   + D L   +  V   G+QW + K    + +  YLK  AN W  F++   +P +H  T+S +R+LL++A L    I+
Subjt:  RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGID

Query:  VGKIIYSEIYNCWSKKVGKLFFPNTITMLCSRAGVPT
        VGKII  EI+NC  KK G ++FP+ IT LC +A V T
Subjt:  VGKIIYSEIYNCWSKKVGKLFFPNTITMLCSRAGVPT

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-2333.63Show/hide
Query:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA
        ++GF+ +         F+   IT H W QFCA PE     +VR                          AIN++F L D P     E +   +   L   
Subjt:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA

Query:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR
        +  V + GA+W +S     T   + L   A  W  F+K HLLPTTH  TVS+DR+LL+ + L    I+VG++I+SEI  C ++K G LFFP+ IT LC  
Subjt:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR

Query:  AGVPTSPEDVILLDKGIIDMPNLARL
        A  P    +  L + G ID   +AR+
Subjt:  AGVPTSPEDVILLDKGIIDMPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)3.3e-2233.19Show/hide
Query:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA
        ++GF+ +         F+   IT H W QFCA PE     +VR                          AIN++F L D P     E +   +   L   
Subjt:  KRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVR--------------------------AINSLFNLQDFPHAGFHEMVVAPSNDQLNAA

Query:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR
        +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ + L    I+VG++I+SEI  C ++K G LFFP+ IT LC  
Subjt:  VREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSR

Query:  AGVPTSPEDVILLDKGIIDMPNLARL
        A  P    +  L + G ID   +AR+
Subjt:  AGVPTSPEDVILLDKGIIDMPNLARL

A0A5D2MA47 Uncharacterized protein2.0e-1938.69Show/hide
Query:  RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGID
        ++IN LFNL D     ++ M+   + D L   +  V   G+QW + K    + +  YLK  AN W  F++   +P +H  T+S +R+LL++A L    I+
Subjt:  RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGID

Query:  VGKIIYSEIYNCWSKKVGKLFFPNTITMLCSRAGVPT
        VGKII  EI+NC  KK G ++FP+ IT LC +A V T
Subjt:  VGKIIYSEIYNCWSKKVGKLFFPNTITMLCSRAGVPT

W9QTD9 Uncharacterized protein1.2e-1929.77Show/hide
Query:  PHFLRAGITNHGWDQFCAKPES---------------VNSNIV-----------RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLS
        P F+   I  HGW QFC  P +                N   V           RAINS+F L++     + +     +++QL   + EV I+GA W++S
Subjt:  PHFLRAGITNHGWDQFCAKPES---------------VNSNIV-----------RAINSLFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLS

Query:  KTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNC-WSKKVGKLFFPNTITMLCSRAGVPTSPEDVILL
             T     LK  A  W  F+    +P+TH  TV++DRVLL+++ L  + +++ +I   EI  C  ++K G L+FP+ IT L  +A VP   ++ I+ 
Subjt:  KTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNC-WSKKVGKLFFPNTITMLCSRAGVPTSPEDVILL

Query:  DKGIIDMPNLARLQR
        + G I   +++R+ +
Subjt:  DKGIIDMPNLARLQR

W9S7D3 Uncharacterized protein9.7e-2229.13Show/hide
Query:  KQQEDKGKGV--------AEAPTETEEIDVEEPSLPYARFINDFTRAKYLEMLKRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVRAINS
        K +  KGKGV        +E+   TE  +V++ + P A    D    K    ++RGF++ RG     P F+ + I  H W  FC  P +  + +  AINS
Subjt:  KQQEDKGKGV--------AEAPTETEEIDVEEPSLPYARFINDFTRAKYLEMLKRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVRAINS

Query:  LFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKII
        L++L D     F+    + + DQL+  + E+ ++G +W  +     TF    L+     W  F++  L+P++H   V ++R +L++  ++   ++VG++I
Subjt:  LFNLQDFPHAGFHEMVVAPSNDQLNAAVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKII

Query:  YSEIYNCWSKKVGKLFFPNTITMLCSRAGV
          ++  C  +K G L+FP+ IT LC   GV
Subjt:  YSEIYNCWSKKVGKLFFPNTITMLCSRAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGGCGACGGGTGGTGAGTTGCAGAACGAAGAAGAAGAAAAAGAAAAGGACGCTGGCGCGGGACAAGAAAAGCGAGCAGAGGATGTGCAAGGACAAGGTAATGG
TCAGGAACAACATATTCAAGAAGTTGTGCCGGAGATTCCGCATCGCTGTCGCCGTAAGCAAAAGGCGGGGCGAGTCAAGGTGGTTAGGGTTGACACTCCATCTCCGTCAA
CGATAGAATTTGAGAAAGAAAATACAAAAAATGAGGATCAAGAGAAAGAAGAAACTGAAAATAAGGCTGAAGAAAAAGCCCTGACGAAGCAACAAGAAGACAAGGGCAAA
GGGGTTGCTGAAGCGCCGACAGAGACAGAAGAGATTGACGTTGAGGAACCGAGTCTGCCGTATGCACGCTTCATCAACGATTTTACCAGAGCAAAATATCTGGAAATGTT
GAAGAGGGGCTTCTTGTTTGAAAGGGGATTCGGTGATGACTTGCCTCATTTCCTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCGCGAAGCCAGAATCGG
TGAATTCAAATATTGTTCGAGCGATAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCCGGATTTCATGAGATGGTGGTGGCACCATCTAATGATCAGTTGAACGCG
GCTGTCAGAGAGGTTGGTATTGACGGGGCCCAGTGGAGGTTGTCAAAGACTGAGAAACGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGTGCTT
CATCAAATTGCATTTACTCCCGACAACTCATGATTCGACAGTATCCCGGGATAGAGTGCTTCTGGTGTTTGCCACTCTGAGATCCTTGGGTATAGATGTTGGCAAGATAA
TTTATAGTGAAATCTACAATTGTTGGAGTAAGAAGGTGGGAAAATTGTTCTTCCCAAACACGATTACCATGTTGTGCAGTAGGGCAGGGGTGCCCACAAGTCCGGAGGAT
GTTATTCTACTTGATAAGGGAATTATAGACATGCCCAATTTGGCTCGGCTTCAGCGCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGGCGACGGGTGGTGAGTTGCAGAACGAAGAAGAAGAAAAAGAAAAGGACGCTGGCGCGGGACAAGAAAAGCGAGCAGAGGATGTGCAAGGACAAGGTAATGG
TCAGGAACAACATATTCAAGAAGTTGTGCCGGAGATTCCGCATCGCTGTCGCCGTAAGCAAAAGGCGGGGCGAGTCAAGGTGGTTAGGGTTGACACTCCATCTCCGTCAA
CGATAGAATTTGAGAAAGAAAATACAAAAAATGAGGATCAAGAGAAAGAAGAAACTGAAAATAAGGCTGAAGAAAAAGCCCTGACGAAGCAACAAGAAGACAAGGGCAAA
GGGGTTGCTGAAGCGCCGACAGAGACAGAAGAGATTGACGTTGAGGAACCGAGTCTGCCGTATGCACGCTTCATCAACGATTTTACCAGAGCAAAATATCTGGAAATGTT
GAAGAGGGGCTTCTTGTTTGAAAGGGGATTCGGTGATGACTTGCCTCATTTCCTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCGCGAAGCCAGAATCGG
TGAATTCAAATATTGTTCGAGCGATAAATTCTCTCTTCAACCTCCAGGATTTTCCACATGCCGGATTTCATGAGATGGTGGTGGCACCATCTAATGATCAGTTGAACGCG
GCTGTCAGAGAGGTTGGTATTGACGGGGCCCAGTGGAGGTTGTCAAAGACTGAGAAACGCACATTCCAAGCAGCCTATTTGAAGAGTGAGGCTAACACATGGTTGTGCTT
CATCAAATTGCATTTACTCCCGACAACTCATGATTCGACAGTATCCCGGGATAGAGTGCTTCTGGTGTTTGCCACTCTGAGATCCTTGGGTATAGATGTTGGCAAGATAA
TTTATAGTGAAATCTACAATTGTTGGAGTAAGAAGGTGGGAAAATTGTTCTTCCCAAACACGATTACCATGTTGTGCAGTAGGGCAGGGGTGCCCACAAGTCCGGAGGAT
GTTATTCTACTTGATAAGGGAATTATAGACATGCCCAATTTGGCTCGGCTTCAGCGCACGTAG
Protein sequenceShow/hide protein sequence
MAPATGGELQNEEEEKEKDAGAGQEKRAEDVQGQGNGQEQHIQEVVPEIPHRCRRKQKAGRVKVVRVDTPSPSTIEFEKENTKNEDQEKEETENKAEEKALTKQQEDKGK
GVAEAPTETEEIDVEEPSLPYARFINDFTRAKYLEMLKRGFLFERGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVRAINSLFNLQDFPHAGFHEMVVAPSNDQLNA
AVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLCFIKLHLLPTTHDSTVSRDRVLLVFATLRSLGIDVGKIIYSEIYNCWSKKVGKLFFPNTITMLCSRAGVPTSPED
VILLDKGIIDMPNLARLQRT