; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004625 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004625
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionplastid division protein CDP1, chloroplastic
Genome locationscaffold9:11517108..11526600
RNA-Seq ExpressionSpg004625
SyntenySpg004625
Gene Ontology termsGO:0010020 - chloroplast fission (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009528 - plastid inner membrane (cellular component)
GO:0043621 - protein self-association (molecular function)
InterPro domainsIPR044685 - Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025111.1 Plastid division protein CDP1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]8.6e-5689.68Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK VLDIGQ V+Q PMAKP++HDILLSMVLAECAIAKI FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSL KL+LLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

XP_022156014.1 plastid division protein CDP1, chloroplastic [Momordica charantia]2.1e-5792.06Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIR+PWAWLPGALCLLQEVGEAKIVLDIGQ VVQ PMAKPYIHDILLSM LAECAIAKI FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSLGKLKLL Q++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

XP_038885037.1 plastid division protein CDP1, chloroplastic isoform X1 [Benincasa hispida]9.2e-5892.06Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK+VLDIGQ VVQ PMAKPY+HDILLSMVLAECAIAK+ FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSLGKLKLLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

XP_038885039.1 plastid division protein CDP1, chloroplastic isoform X2 [Benincasa hispida]1.4e-5892.13Show/hide
Query:  YRDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGF
        Y+DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK+VLDIGQ VVQ PMAKPY+HDILLSMVLAECAIAK+ FEKNMVSQGF
Subjt:  YRDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGF

Query:  EALARAQYLLRSQTSLGKLKLLSQVKE
        EALARAQYLLRSQTSLGKLKLLSQ++E
Subjt:  EALARAQYLLRSQTSLGKLKLLSQVKE

XP_038885040.1 plastid division protein CDP1, chloroplastic isoform X3 [Benincasa hispida]9.2e-5892.06Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK+VLDIGQ VVQ PMAKPY+HDILLSMVLAECAIAK+ FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSLGKLKLLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

TrEMBL top hitse value%identityAlignment
A0A0A0K7W1 DUF4101 domain-containing protein5.5e-5690.48Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+I PKSSIRIPWAWLPGALCLLQEVGEAK+VLDIGQ VVQ PMAKPY+HDILLSMVLAECAIAK+ FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSL KLKLLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

A0A6J1DS05 plastid division protein CDP1, chloroplastic9.9e-5892.06Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIR+PWAWLPGALCLLQEVGEAKIVLDIGQ VVQ PMAKPYIHDILLSM LAECAIAKI FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSLGKLKLL Q++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

A0A6J1EWF8 plastid division protein CDP1, chloroplastic-like2.7e-5588.1Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVG+AKIVLDIG+ V+Q P+AKPY+HDILLSMVLAECAIAKI FEKN VSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLR QTSL KLKLLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

A0A6J1EXU2 plastid division protein CDP1, chloroplastic-like4.2e-5689.68Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEPHYAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK VLDIGQ V+Q PMAKP++HDILLSMVLAECAIAKI FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSL KL+LLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

A0A6J1IGB5 plastid division protein CDP1, chloroplastic-like1.2e-5589.68Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFEP+YAGNMKE+IPPKSSIRIPWAWLPGALCLLQEVGEAK VLDIGQ V+Q PMAKP++HDILLSMVLAECAIAKI FEKNMVSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQYLLRSQTSL KLKLLSQ++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

SwissProt top hitse value%identityAlignment
Q8VY16 Plastid division protein CDP1, chloroplastic2.4e-4572.22Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFE  YAGN+KE I PKS +RIPWAWLPGALCLLQEVG+ K+VLDIG+  ++   +KPYIHDI LSM LAECAIAK AFE N VSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQ  L+S+ +LGKL LL+Q++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

Q9FIG9 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic1.9e-0534.15Show/hide
Query:  IPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAK--IAFEKNMVSQGFEALARAQYLLRSQ
        +PW  +PGALC+LQE GE +IVL +G+ +++  + K +  D++L M LA   +++  +A +      G+E +  A  LL+ +
Subjt:  IPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAK--IAFEKNMVSQGFEALARAQYLLRSQ

Arabidopsis top hitse value%identityAlignment
AT3G19180.1 paralog of ARC61.7e-4672.22Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFE  YAGN+KE I PKS +RIPWAWLPGALCLLQEVG+ K+VLDIG+  ++   +KPYIHDI LSM LAECAIAK AFE N VSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQ  L+S+ +LGKL LL+Q++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

AT3G19180.2 paralog of ARC61.7e-4672.22Show/hide
Query:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE
        +DLLMDVRDKLLFE  YAGN+KE I PKS +RIPWAWLPGALCLLQEVG+ K+VLDIG+  ++   +KPYIHDI LSM LAECAIAK AFE N VSQGFE
Subjt:  RDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAKIAFEKNMVSQGFE

Query:  ALARAQYLLRSQTSLGKLKLLSQVKE
        ALARAQ  L+S+ +LGKL LL+Q++E
Subjt:  ALARAQYLLRSQTSLGKLKLLSQVKE

AT5G42480.1 Chaperone DnaJ-domain superfamily protein1.3e-0634.15Show/hide
Query:  IPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAK--IAFEKNMVSQGFEALARAQYLLRSQ
        +PW  +PGALC+LQE GE +IVL +G+ +++  + K +  D++L M LA   +++  +A +      G+E +  A  LL+ +
Subjt:  IPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAECAIAK--IAFEKNMVSQGFEALARAQYLLRSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTCAAAGCCACCGTTTGCCCATTGTTTCTTCTTGGCAAAGCCTTTCAACCGGGAAAAGAAGACCTTATGGTTCAGCATCAACATAGTCTTCATTTGGATGGTGG
GGAAATTGGAATGAAAGAAATGCTAGGATTTTTCAAGAAAAGGAAAGATCTCTTGGAAACCAGAGGATTGGATTCTGCTCTCATCCAAAGACGCCTCCTGATAGTAGATG
AACTCCTATCTATCTCTTCTAAAGAAGAAGTTTCTTGGAGACAAAAGTGTAAAATGAAATGGCTTTTGGTGGGAGATGAAAACAACAGTGTCTTCCACCATTTAATGTCT
ACCAGAATGAGAAACAAATACTATCATAGAGGTCCTGTCAAGGAGTGGGGGCAGCTTGGTTACCGATGGAGGTTGAAGAGGGTCTTGCTGTCCACCATCACAGAATACCT
GGTCCAAGGTGTAAACAATTCTGTGGATAACCTGCCACATGAAAAATTTAACCTTGTTGGAGAGATGTTTAAGAATTTGTTATGGCATGGAAGTAAAGGTAAAGGTGGAT
TGCACCTCTATGGCATAAAGTACAATTTCCATCCAAGGAGAGGAGATCTCCTTGGATTTCCATCTCTCCAAATTGGTGTACCCTTTGCTGAAAGAGTGAAGAATCCAATC
AGCATCTTTTCATCACTTGTCCATATGCTGGTGCCTTTTGGAAGGCCATTCTCCTTGCTTTCAACTGGCCCATTGCACTACCGGGATCTTTTAATGGATGTGAGAGACAA
GCTTCTATTTGAACCACATTATGCTGGTAACATGAAGGAAAGCATCCCACCTAAGTCTTCCATTCGAATTCCTTGGGCTTGGTTGCCAGGTGCTCTTTGCCTACTTCAAG
AGGTTGGAGAAGCAAAAATAGTGCTCGACATTGGACAGAAAGTTGTTCAATATCCAATGGCTAAGCCTTATATCCATGATATACTGCTTTCCATGGTATTAGCGGAGTGT
GCAATTGCAAAGATTGCTTTTGAGAAGAACATGGTGTCTCAAGGATTTGAAGCTCTTGCACGTGCACAATATCTACTAAGAAGTCAAACATCTCTTGGGAAACTAAAATT
GTTATCTCAGGTGAAAGAAGGGGAAGTTTTTGTGACAAGCGATGGTTGTGCTGGTTTTGTGGGGGAGTGGAATAATAGGACCTTTAGAGGGATTGAGATGGACCCCAGTT
ATGTTTGGTCCCTTGTTAGGTTCTATGTTTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTCAAAGCCACCGTTTGCCCATTGTTTCTTCTTGGCAAAGCCTTTCAACCGGGAAAAGAAGACCTTATGGTTCAGCATCAACATAGTCTTCATTTGGATGGTGG
GGAAATTGGAATGAAAGAAATGCTAGGATTTTTCAAGAAAAGGAAAGATCTCTTGGAAACCAGAGGATTGGATTCTGCTCTCATCCAAAGACGCCTCCTGATAGTAGATG
AACTCCTATCTATCTCTTCTAAAGAAGAAGTTTCTTGGAGACAAAAGTGTAAAATGAAATGGCTTTTGGTGGGAGATGAAAACAACAGTGTCTTCCACCATTTAATGTCT
ACCAGAATGAGAAACAAATACTATCATAGAGGTCCTGTCAAGGAGTGGGGGCAGCTTGGTTACCGATGGAGGTTGAAGAGGGTCTTGCTGTCCACCATCACAGAATACCT
GGTCCAAGGTGTAAACAATTCTGTGGATAACCTGCCACATGAAAAATTTAACCTTGTTGGAGAGATGTTTAAGAATTTGTTATGGCATGGAAGTAAAGGTAAAGGTGGAT
TGCACCTCTATGGCATAAAGTACAATTTCCATCCAAGGAGAGGAGATCTCCTTGGATTTCCATCTCTCCAAATTGGTGTACCCTTTGCTGAAAGAGTGAAGAATCCAATC
AGCATCTTTTCATCACTTGTCCATATGCTGGTGCCTTTTGGAAGGCCATTCTCCTTGCTTTCAACTGGCCCATTGCACTACCGGGATCTTTTAATGGATGTGAGAGACAA
GCTTCTATTTGAACCACATTATGCTGGTAACATGAAGGAAAGCATCCCACCTAAGTCTTCCATTCGAATTCCTTGGGCTTGGTTGCCAGGTGCTCTTTGCCTACTTCAAG
AGGTTGGAGAAGCAAAAATAGTGCTCGACATTGGACAGAAAGTTGTTCAATATCCAATGGCTAAGCCTTATATCCATGATATACTGCTTTCCATGGTATTAGCGGAGTGT
GCAATTGCAAAGATTGCTTTTGAGAAGAACATGGTGTCTCAAGGATTTGAAGCTCTTGCACGTGCACAATATCTACTAAGAAGTCAAACATCTCTTGGGAAACTAAAATT
GTTATCTCAGGTGAAAGAAGGGGAAGTTTTTGTGACAAGCGATGGTTGTGCTGGTTTTGTGGGGGAGTGGAATAATAGGACCTTTAGAGGGATTGAGATGGACCCCAGTT
ATGTTTGGTCCCTTGTTAGGTTCTATGTTTCTCTTTGA
Protein sequenceShow/hide protein sequence
MSLKATVCPLFLLGKAFQPGKEDLMVQHQHSLHLDGGEIGMKEMLGFFKKRKDLLETRGLDSALIQRRLLIVDELLSISSKEEVSWRQKCKMKWLLVGDENNSVFHHLMS
TRMRNKYYHRGPVKEWGQLGYRWRLKRVLLSTITEYLVQGVNNSVDNLPHEKFNLVGEMFKNLLWHGSKGKGGLHLYGIKYNFHPRRGDLLGFPSLQIGVPFAERVKNPI
SIFSSLVHMLVPFGRPFSLLSTGPLHYRDLLMDVRDKLLFEPHYAGNMKESIPPKSSIRIPWAWLPGALCLLQEVGEAKIVLDIGQKVVQYPMAKPYIHDILLSMVLAEC
AIAKIAFEKNMVSQGFEALARAQYLLRSQTSLGKLKLLSQVKEGEVFVTSDGCAGFVGEWNNRTFRGIEMDPSYVWSLVRFYVSL